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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97361_cuf0 >transcript:BL97361_cuf0-protein ID=transcript:BL97361_cuf0-protein|Name=transcript:BL97361_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=122bp
LGCDHTRLLPSLIEASTQKGKEMWRLCLALWLPLAAGAITQTGSTYRCGS
QDMAGGESGTIVSVNHPSRYRNNADCAWQITVGEGNTVSITFDAFDIEDG
PSCGYDYIEIYDGMDAKSMGRF Run BLAST on NCBI mRNA from alignment at Sc0000108:314287..315499+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97361_cuf0 ID=transcript:BL97361_cuf0|Name=transcript:BL97361_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1213bp|location=Sequence derived from alignment at Sc0000108:314287..315499+ (Branchiostoma lanceolatum)
GACTTGGTTGCGATCACACACGTTTGTTACCGTCTCTCATTGAAGCCTCT
ACACAGGTAAAAAATTACCTTTTACTGTGACGTTTTCATTTTAAGTTAAA
TAAGGGTCTTTGATGTTAGATACAGCTACAGAAATGGTTTTCAAATGGTT
TGCCAAACATGTCAACCATTAAAACGTCGCGCAAGAGCAAAATCAAACTT
ACTCATACAGTAAGACATTTTGTGTGTCTGATTACGTGTTGTAATCTTCT
GTTGGATCTCATAAGTTGTTTCCTTTTCATTATCAGAAGGGAAAGGAAAT
GTGGCGTCTGTGCCTCGCATTGTGGTTGCCACTTGCCGCTGGTGCCATTA
CACAAACTGGTGAGTGATTTAGTTTACTGTGAGCGCTGAAGGTTCACCGT
TTCTAACATAAATTGCTTTACAAATTTCCAGTCAAAAGATAAATCACAGA
ACAAACTAACATGTGTGTTTTGTACACATTTTCCTTGTTCTTGTAGGCTC
TACCTATCGGTGTGGATCCCAGGACATGGCGGGAGGAGAGTCAGGGACCA
TCGTCTCGGTGAACCACCCCTCCCGGTACCGCAACAACGCCGACTGCGCC
TGGCAAATCACCGTGGGAGAGGGCAACACGGTGTCCATCACGTAAGACAA
CAACGGCGAAGACTTCTTCGTACAACTAGTATACTGTTACAGTAAGATCT
AAACATGGAGAACCTGTACTTATGTATCCTTTATATCTTTCAAAAGTCAC
ATATTGTATATTGCAAACAATGTTAATGTAGTATTCACGTTTGCGTGCGT
GCGTGTCCGGCGGAATAACCTAAGAACCGGCCTGGATGGACTGTAATGAT
ATTTGGTGTGTGATTAGGTGTTATGGACCCGACGGTCAAGTTCGATTCGG
GGCCTCCTGATGGCCGACCTTGGCATTGCAGCAGAACTTGCGGTTTTTGT
ATCTTTGGTCCTAGACATGCTGTGGTCTTCTTTACTCAGCTTCGACGCCT
TTGACATCGAAGACGGTCCGTCCTGTGGATACGACTATATCGAGATCTAT
GACGGCATGGATGCTAAGAGCATGGGTACGTTGGACACGAACTTCGCTTT
TCTTGTTGATCTGATGCAAGGAGGTTTAGATTGTCTGATGCTAGATTCTG
TTGTCCACGGACATGAAAACACATTACCTCATACGGCTCTTCCGTCTTAA
CAGGACGATTTTG Coding sequence (CDS) from alignment at Sc0000108:314287..315499+ >transcript:BL97361_cuf0 ID=transcript:BL97361_cuf0|Name=transcript:BL97361_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1830bp|location=Sequence derived from alignment at Sc0000108:314287..315499+ (Branchiostoma lanceolatum)
CTTGGTTGCGATCACACACGTTTGTTACCGTCTCTCATTGAAGCCTCTAC
ACAGAAGGGAAAGGAAATGTGGCGTCTGTGCCTCGCATTGTGGTTGCCAC
TTGCCGCTGGTGCCATTACACAAACTGGCTCTACCTATCGGTGTGGATCC
CAGGACATGGCGGGAGGAGAGTCAGGGACCATCGTCTCGGTGAACCACCC
CTCCCGGTACCGCAACAACGCCGACTGCGCCTGGCAAATCACCGTGGGAG
AGGGCAACACGGTGTCCATCACCTTCGACGCCTTTGACATCGAAGACGGT
CCGTCCTGTGGATACGACTATATCGAGATCTATGACGGCATGGATGCTAA
GAGCATGGGACGATTTCTTGGTTGCGATCACACACGTTTGTTACCGTCTC
TCATTGAAGCCTCTACACAGAAGGGAAAGGAAATGTGGCGTCTGTGCCTC
GCATTGTGGTTGCCACTTGCCGCTGGTGCCATTACACAAACTGGCTCTAC
CTATCGGTGTGGATCCCAGGACATGGCGGGAGGAGAGTCAGGGACCATCG
TCTCGGTGAACCACCCCTCCCGGTACCGCAACAACGCCGACTGCGCCTGG
CAAATCACCGTGGGAGAGGGCAACACGGTGTCCATCACCTTCGACGCCTT
TGACATCGAAGACGGTCCGTCCTGTGGATACGACTATATCGAGATCTATG
ACGGCATGGATGCTAAGAGCATGGGACGATTTCTTGGTTGCGATCACACA
CGTTTGTTACCGTCTCTCATTGAAGCCTCTACACAGAAGGGAAAGGAAAT
GTGGCGTCTGTGCCTCGCATTGTGGTTGCCACTTGCCGCTGGTGCCATTA
CACAAACTGGCTCTACCTATCGGTGTGGATCCCAGGACATGGCGGGAGGA
GAGTCAGGGACCATCGTCTCGGTGAACCACCCCTCCCGGTACCGCAACAA
CGCCGACTGCGCCTGGCAAATCACCGTGGGAGAGGGCAACACGGTGTCCA
TCACCTTCGACGCCTTTGACATCGAAGACGGTCCGTCCTGTGGATACGAC
TATATCGAGATCTATGACGGCATGGATGCTAAGAGCATGGGACGATTTCT
TGGTTGCGATCACACACGTTTGTTACCGTCTCTCATTGAAGCCTCTACAC
AGAAGGGAAAGGAAATGTGGCGTCTGTGCCTCGCATTGTGGTTGCCACTT
GCCGCTGGTGCCATTACACAAACTGGCTCTACCTATCGGTGTGGATCCCA
GGACATGGCGGGAGGAGAGTCAGGGACCATCGTCTCGGTGAACCACCCCT
CCCGGTACCGCAACAACGCCGACTGCGCCTGGCAAATCACCGTGGGAGAG
GGCAACACGGTGTCCATCACCTTCGACGCCTTTGACATCGAAGACGGTCC
GTCCTGTGGATACGACTATATCGAGATCTATGACGGCATGGATGCTAAGA
GCATGGGACGATTTCTTGGTTGCGATCACACACGTTTGTTACCGTCTCTC
ATTGAAGCCTCTACACAGAAGGGAAAGGAAATGTGGCGTCTGTGCCTCGC
ATTGTGGTTGCCACTTGCCGCTGGTGCCATTACACAAACTGGCTCTACCT
ATCGGTGTGGATCCCAGGACATGGCGGGAGGAGAGTCAGGGACCATCGTC
TCGGTGAACCACCCCTCCCGGTACCGCAACAACGCCGACTGCGCCTGGCA
AATCACCGTGGGAGAGGGCAACACGGTGTCCATCACCTTCGACGCCTTTG
ACATCGAAGACGGTCCGTCCTGTGGATACGACTATATCGAGATCTATGAC
GGCATGGATGCTAAGAGCATGGGACGATTT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000108 | genome | Sc0000108:314287..315499 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97361_cuf0 |
| Biotype | protein_coding |
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