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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97358_cuf7 >transcript:BL97358_cuf7-protein ID=transcript:BL97358_cuf7-protein|Name=transcript:BL97358_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=281bp
TDSRKRPTTGDEDVLGSTVTRPAERHDFSTAYSTKTTSLDVPFTARSTPF
TSTKTTGWVPVSSTHKSGPFHSTSTTETRQQTTGVRKGLPTLFTQSLPKT
THQTTESNKTFLTTPAEDSRTQQQEVTNDPTATAGRLGLNIFALIAIAVA
TLAFLFLLLILVIWSCRRRNHKIKHQKLELLNYRTEIRAPPTGGTTPENV
PMSDMSSSGQQGDLVANGSAGPKPSEDANMSDDDCDIEPEVTYTELDLAI
NWDAPVRRTQPETVYAQIRPPSDKTGATYAV Run BLAST on NCBI mRNA from alignment at Sc0000072:1169758..1173131+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97358_cuf7 ID=transcript:BL97358_cuf7|Name=transcript:BL97358_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=3374bp|location=Sequence derived from alignment at Sc0000072:1169758..1173131+ (Branchiostoma lanceolatum)
CACTGATTCAAGAAAGCGCCCAACCACAGGAGATGAAGATGTACTTGGGT
CCACAGTCACCAGGCCAGCAGAACGTAAGACCTTCACATTTCTTTTTACT
TTTTTTTTTCATTTTCTATGCTGCAACATGTTTGCTGGTTACTTATATGC
ATCGTCGCTGTAGACATCTAAGTCTGGCATTACATGCCTGGCCCGACTCA
AAGTTCAACGTGTCACCAATACCGTTGCACTATTAGTGACCCAAAACAAG
CCGTTTGACAGAGCCTTTTTAACTACCAGGGCATGATTTTTCGACAGCTT
ACTCGACGAAAACAACATCCCTTGACGTGCCGTTTACTGCGAGAAGCACG
CCCTTTACGTCGACCAAAACAACTGGATGGGTACCAGTCTCTTCCACACA
CAAGTCAGGACCATTCCACAGCACCTCAACCACCGAGACCAGGCAACAAA
CAACCGGTGTGCGGAAAGGTCTCCCAACCTTGTTCACACAGTCACTGCCA
AAGACAACGCATCAGACAACAGAATCCAACAAGACGTTCCTGACGACCCC
CGCTGAAGACTCGAGGACACAACAGCAAGAGGTCACCAACGACCCAACCG
CAACGGCCGGCAGATTGGGATTAAACAGTGAGATATTTCTGAAACCATAC
TATAGCTAACGTAACATGACCTATTTACGTGCAGGAGTAGTTTACGTCCA
GATTGGGTCATGTCCACATGTAGCGGTGTATTATGCCAAAGCCTGTTCTC
ATGAACAACAAAGAACGTCATAAGTATGATCCTCAGCCATCTCTCCCTTT
TATACAAAACATTTAAAAGGGTTTACGTCCAGCGACATAACAGAATAAAC
TCCTGAACCAGTAACAACAAGTTGCACGGAAGCGCCATGCATGACGCATT
TCATATGTAATTCGACACCGCGTATTTAATAATGTTTTTCTAACTTACAC
GATAGCTAGTATCTTTTAAAAGTAGCTGACGTTAAACCTTTCTTTGATAT
TCAGACTATCCGTGGTGATTCGAGGTTTGAAACTCTTGCCAGTTTTAGGA
AGGTTTGATACAACCTAGCGGCCCCCGCTCAGAAGATACATTTTTGTACG
GCATAACATCATGGCCATGTGTTTATCACGTGAACGCCACGTGCTACTGA
TTTCGGGGAAATTCACAATACAAAAATTATTTTGTTCCATCGCGTCGGGC
AAGCGGAGGGACAAACATAGTGGCTTTACTGTCATTTGTCTGTAGACTAC
TTTCGACAGTTACTGTGCATTTTTTCCGGTCTATGTTCTTCAAGCATAGC
GCTAGAAGGGAAAATACTGAGGTGGACGATAAAGGTTAAGCCTAGCACAA
TTCTACACAATATACCCCAGTATAAATACATGCTCGCACGGCGTTAAACA
GGCGGAGAAAAACTTACAAGACCATGCATTTTCTTGTTAGAAGAGCTGAT
ATTTCTACCCATGGGTTAAACATTTGGCTCTGTCCGCGCGGTTTTAGGAT
AAATAACGTTTTGAATAAATCTGACGTAAACTGGTCATGTTACGTTAGTA
CATAAGATATGCATTTCATTCCCATTTATCCTTTTCGAAACCTCAAGTCA
GGACGAGTTTTCCTGTCCCATGTGTTGAAGGCATGGATGTGATTGTGATA
CTTTGTTTTGATTGCAGTCTTCGCCCTGATCGCTATCGCTGTGGCGACCT
TGGCTTTCCTGTTCCTACTGCTGATACTGGTCATATGGAGCTGTCGAAGA
AGGTACGATGATTTATTTTCAGTGGACCCGTTTTCATCAATATGTGAGCC
ATCATGGTAACTTTGGTATCTGATCATAGCCGTCCTGTACTTTTCGTGCC
TCAACTCAGGAACCACAAGATCAAGCATCAGAAACTGGAGCTGCTGAACT
ACAGGACAGAAATAAGAGCACCCCCTACCGGCGGCACCACACCGGAGAAC
GTGCCGATGTCAGACATGTCCTCAAGTGGGTGAGTTTTGTATCTTCCACA
ATTGTGTGTAAATTACTAAAACCATGAGCATGAATGATGATCTGTGTACT
CTACTGTGATGTGATAGCCTACAGGTACCGTCAGAACGACAGCTTGAGTG
TGTATAGTGATATCCTGTGTTTCAATTTTATCCGTGAGTCCATGTAACGT
TAACAACATCTGAAAGCCAAGTTGAAATATTCAAGTCCTAACCACTCTGT
ACTCTGATTCAGACAGCAGGGTGACTTAGTGGCAAATGGGTCGGCTGGCC
CGAAACCAAGTGAAGACGCAAACATGGTAAGTTGCATTGGACGTCTTTCT
CCTCTCATCCATAGAAATTTCGGCTTTATATTTTTGTGACGTATACATCG
GTCTTGAACAAGTTTTCATGATGTAAGAAGATGGCCAAGTCGAATCCTGA
AGAGTTAGCCCTTCTGATTCTGTGTCAAAACATTTTGCTACGACATGTGC
GTCAGTTTTGAACATTTTCGAAGCCCTTCTGAAAGCACGTACTAATAGCA
ACGTACATACATATTCACGGGTCATTACAAACTTGAAGAGTTAGATGCGT
TTCTGCATTAGTCCAGTAGTTTTATTACAAACCACAAAATCAATTTCGGT
GCTCTCCCTTCTTCAGAGCGATGATGACTGTGACATTGAACCGGAAGTGA
CGTATACGGAACTGGACCTGGCCATAAATTGGGACGCTCCTGTCAGACGA
ACCCAGCCGGAGACGGTGTACGCTCAAATCCGCCCTCCGTCAGATAAGAC
TGGAGCTACGTATGCCGTGTAGTAATGGTTAAGTTACAGATATAGGAGAG
CAACGAAAAGTTGCACATCACAAAGTGCCGTCTTATTACTGAACAAAATC
GCAGCGTTTGTTGGTATTCTAATGATATTGTCCCATACACGACTTATGTA
ACAAGACTGGCTATGTTTAGCATATTAGTGCTACTGCAAAATAATCTTTT
TATATGTAATTGTAGGTTATTAGTAGGTTAGTAGCAGGTTATGTAAATAT
ACATGACTCAACACATAACCAAATTGTGAAAAAAGACGGTCACAGATATT
GCTGTTTGGTACAAACAAATTACCACGCAGATATATTTCCGACCAACGTC
GTTCATTTCAGACCTGTGTAGACTGTTAGTGGTCTGATGTTTTCTAGTAG
TTTACAACTGGTATCTGATTATCAAGTTAACCAAAGACACGTATTCATCA
AAGTGCAGCAATATTGATAATCATTCTTTTGTTTGATAACCAGTATCTCA
ATCCGCATTCTATTGTCTAATGACACCCCTTACGTACACTCAGTGCGTTC
GATATCAAAGAGTTTCATGACACAAGACCAACAGTTCCTGTTTCAATTAG
TTGAATAAACTATTGTGATTATTG Coding sequence (CDS) from alignment at Sc0000072:1169758..1173131+ >transcript:BL97358_cuf7 ID=transcript:BL97358_cuf7|Name=transcript:BL97358_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=5076bp|location=Sequence derived from alignment at Sc0000072:1169758..1173131+ (Branchiostoma lanceolatum)
ACTGATTCAAGAAAGCGCCCAACCACAGGAGATGAAGATGTACTTGGGTC
CACAGTCACCAGGCCAGCAGAACGGCATGATTTTTCGACAGCTTACTCGA
CGAAAACAACATCCCTTGACGTGCCGTTTACTGCGAGAAGCACGCCCTTT
ACGTCGACCAAAACAACTGGATGGGTACCAGTCTCTTCCACACACAAGTC
AGGACCATTCCACAGCACCTCAACCACCGAGACCAGGCAACAAACAACCG
GTGTGCGGAAAGGTCTCCCAACCTTGTTCACACAGTCACTGCCAAAGACA
ACGCATCAGACAACAGAATCCAACAAGACGTTCCTGACGACCCCCGCTGA
AGACTCGAGGACACAACAGCAAGAGGTCACCAACGACCCAACCGCAACGG
CCGGCAGATTGGGATTAAACATCTTCGCCCTGATCGCTATCGCTGTGGCG
ACCTTGGCTTTCCTGTTCCTACTGCTGATACTGGTCATATGGAGCTGTCG
AAGAAGGAACCACAAGATCAAGCATCAGAAACTGGAGCTGCTGAACTACA
GGACAGAAATAAGAGCACCCCCTACCGGCGGCACCACACCGGAGAACGTG
CCGATGTCAGACATGTCCTCAAGTGGACAGCAGGGTGACTTAGTGGCAAA
TGGGTCGGCTGGCCCGAAACCAAGTGAAGACGCAAACATGAGCGATGATG
ACTGTGACATTGAACCGGAAGTGACGTATACGGAACTGGACCTGGCCATA
AATTGGGACGCTCCTGTCAGACGAACCCAGCCGGAGACGGTGTACGCTCA
AATCCGCCCTCCGTCAGATAAGACTGGAGCTACGTATGCCGTGTAGACTG
ATTCAAGAAAGCGCCCAACCACAGGAGATGAAGATGTACTTGGGTCCACA
GTCACCAGGCCAGCAGAACGGCATGATTTTTCGACAGCTTACTCGACGAA
AACAACATCCCTTGACGTGCCGTTTACTGCGAGAAGCACGCCCTTTACGT
CGACCAAAACAACTGGATGGGTACCAGTCTCTTCCACACACAAGTCAGGA
CCATTCCACAGCACCTCAACCACCGAGACCAGGCAACAAACAACCGGTGT
GCGGAAAGGTCTCCCAACCTTGTTCACACAGTCACTGCCAAAGACAACGC
ATCAGACAACAGAATCCAACAAGACGTTCCTGACGACCCCCGCTGAAGAC
TCGAGGACACAACAGCAAGAGGTCACCAACGACCCAACCGCAACGGCCGG
CAGATTGGGATTAAACATCTTCGCCCTGATCGCTATCGCTGTGGCGACCT
TGGCTTTCCTGTTCCTACTGCTGATACTGGTCATATGGAGCTGTCGAAGA
AGGAACCACAAGATCAAGCATCAGAAACTGGAGCTGCTGAACTACAGGAC
AGAAATAAGAGCACCCCCTACCGGCGGCACCACACCGGAGAACGTGCCGA
TGTCAGACATGTCCTCAAGTGGACAGCAGGGTGACTTAGTGGCAAATGGG
TCGGCTGGCCCGAAACCAAGTGAAGACGCAAACATGAGCGATGATGACTG
TGACATTGAACCGGAAGTGACGTATACGGAACTGGACCTGGCCATAAATT
GGGACGCTCCTGTCAGACGAACCCAGCCGGAGACGGTGTACGCTCAAATC
CGCCCTCCGTCAGATAAGACTGGAGCTACGTATGCCGTGTAGACTGATTC
AAGAAAGCGCCCAACCACAGGAGATGAAGATGTACTTGGGTCCACAGTCA
CCAGGCCAGCAGAACGGCATGATTTTTCGACAGCTTACTCGACGAAAACA
ACATCCCTTGACGTGCCGTTTACTGCGAGAAGCACGCCCTTTACGTCGAC
CAAAACAACTGGATGGGTACCAGTCTCTTCCACACACAAGTCAGGACCAT
TCCACAGCACCTCAACCACCGAGACCAGGCAACAAACAACCGGTGTGCGG
AAAGGTCTCCCAACCTTGTTCACACAGTCACTGCCAAAGACAACGCATCA
GACAACAGAATCCAACAAGACGTTCCTGACGACCCCCGCTGAAGACTCGA
GGACACAACAGCAAGAGGTCACCAACGACCCAACCGCAACGGCCGGCAGA
TTGGGATTAAACATCTTCGCCCTGATCGCTATCGCTGTGGCGACCTTGGC
TTTCCTGTTCCTACTGCTGATACTGGTCATATGGAGCTGTCGAAGAAGGA
ACCACAAGATCAAGCATCAGAAACTGGAGCTGCTGAACTACAGGACAGAA
ATAAGAGCACCCCCTACCGGCGGCACCACACCGGAGAACGTGCCGATGTC
AGACATGTCCTCAAGTGGACAGCAGGGTGACTTAGTGGCAAATGGGTCGG
CTGGCCCGAAACCAAGTGAAGACGCAAACATGAGCGATGATGACTGTGAC
ATTGAACCGGAAGTGACGTATACGGAACTGGACCTGGCCATAAATTGGGA
CGCTCCTGTCAGACGAACCCAGCCGGAGACGGTGTACGCTCAAATCCGCC
CTCCGTCAGATAAGACTGGAGCTACGTATGCCGTGTAGACTGATTCAAGA
AAGCGCCCAACCACAGGAGATGAAGATGTACTTGGGTCCACAGTCACCAG
GCCAGCAGAACGGCATGATTTTTCGACAGCTTACTCGACGAAAACAACAT
CCCTTGACGTGCCGTTTACTGCGAGAAGCACGCCCTTTACGTCGACCAAA
ACAACTGGATGGGTACCAGTCTCTTCCACACACAAGTCAGGACCATTCCA
CAGCACCTCAACCACCGAGACCAGGCAACAAACAACCGGTGTGCGGAAAG
GTCTCCCAACCTTGTTCACACAGTCACTGCCAAAGACAACGCATCAGACA
ACAGAATCCAACAAGACGTTCCTGACGACCCCCGCTGAAGACTCGAGGAC
ACAACAGCAAGAGGTCACCAACGACCCAACCGCAACGGCCGGCAGATTGG
GATTAAACATCTTCGCCCTGATCGCTATCGCTGTGGCGACCTTGGCTTTC
CTGTTCCTACTGCTGATACTGGTCATATGGAGCTGTCGAAGAAGGAACCA
CAAGATCAAGCATCAGAAACTGGAGCTGCTGAACTACAGGACAGAAATAA
GAGCACCCCCTACCGGCGGCACCACACCGGAGAACGTGCCGATGTCAGAC
ATGTCCTCAAGTGGACAGCAGGGTGACTTAGTGGCAAATGGGTCGGCTGG
CCCGAAACCAAGTGAAGACGCAAACATGAGCGATGATGACTGTGACATTG
AACCGGAAGTGACGTATACGGAACTGGACCTGGCCATAAATTGGGACGCT
CCTGTCAGACGAACCCAGCCGGAGACGGTGTACGCTCAAATCCGCCCTCC
GTCAGATAAGACTGGAGCTACGTATGCCGTGTAGACTGATTCAAGAAAGC
GCCCAACCACAGGAGATGAAGATGTACTTGGGTCCACAGTCACCAGGCCA
GCAGAACGGCATGATTTTTCGACAGCTTACTCGACGAAAACAACATCCCT
TGACGTGCCGTTTACTGCGAGAAGCACGCCCTTTACGTCGACCAAAACAA
CTGGATGGGTACCAGTCTCTTCCACACACAAGTCAGGACCATTCCACAGC
ACCTCAACCACCGAGACCAGGCAACAAACAACCGGTGTGCGGAAAGGTCT
CCCAACCTTGTTCACACAGTCACTGCCAAAGACAACGCATCAGACAACAG
AATCCAACAAGACGTTCCTGACGACCCCCGCTGAAGACTCGAGGACACAA
CAGCAAGAGGTCACCAACGACCCAACCGCAACGGCCGGCAGATTGGGATT
AAACATCTTCGCCCTGATCGCTATCGCTGTGGCGACCTTGGCTTTCCTGT
TCCTACTGCTGATACTGGTCATATGGAGCTGTCGAAGAAGGAACCACAAG
ATCAAGCATCAGAAACTGGAGCTGCTGAACTACAGGACAGAAATAAGAGC
ACCCCCTACCGGCGGCACCACACCGGAGAACGTGCCGATGTCAGACATGT
CCTCAAGTGGACAGCAGGGTGACTTAGTGGCAAATGGGTCGGCTGGCCCG
AAACCAAGTGAAGACGCAAACATGAGCGATGATGACTGTGACATTGAACC
GGAAGTGACGTATACGGAACTGGACCTGGCCATAAATTGGGACGCTCCTG
TCAGACGAACCCAGCCGGAGACGGTGTACGCTCAAATCCGCCCTCCGTCA
GATAAGACTGGAGCTACGTATGCCGTGTAGACTGATTCAAGAAAGCGCCC
AACCACAGGAGATGAAGATGTACTTGGGTCCACAGTCACCAGGCCAGCAG
AACGGCATGATTTTTCGACAGCTTACTCGACGAAAACAACATCCCTTGAC
GTGCCGTTTACTGCGAGAAGCACGCCCTTTACGTCGACCAAAACAACTGG
ATGGGTACCAGTCTCTTCCACACACAAGTCAGGACCATTCCACAGCACCT
CAACCACCGAGACCAGGCAACAAACAACCGGTGTGCGGAAAGGTCTCCCA
ACCTTGTTCACACAGTCACTGCCAAAGACAACGCATCAGACAACAGAATC
CAACAAGACGTTCCTGACGACCCCCGCTGAAGACTCGAGGACACAACAGC
AAGAGGTCACCAACGACCCAACCGCAACGGCCGGCAGATTGGGATTAAAC
ATCTTCGCCCTGATCGCTATCGCTGTGGCGACCTTGGCTTTCCTGTTCCT
ACTGCTGATACTGGTCATATGGAGCTGTCGAAGAAGGAACCACAAGATCA
AGCATCAGAAACTGGAGCTGCTGAACTACAGGACAGAAATAAGAGCACCC
CCTACCGGCGGCACCACACCGGAGAACGTGCCGATGTCAGACATGTCCTC
AAGTGGACAGCAGGGTGACTTAGTGGCAAATGGGTCGGCTGGCCCGAAAC
CAAGTGAAGACGCAAACATGAGCGATGATGACTGTGACATTGAACCGGAA
GTGACGTATACGGAACTGGACCTGGCCATAAATTGGGACGCTCCTGTCAG
ACGAACCCAGCCGGAGACGGTGTACGCTCAAATCCGCCCTCCGTCAGATA
AGACTGGAGCTACGTATGCCGTGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000072 | genome | Sc0000072:1169758..1173131 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97358_cuf7 |
| Biotype | protein_coding |
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