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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97345_cuf6 >transcript:BL97345_cuf6-protein ID=transcript:BL97345_cuf6-protein|Name=transcript:BL97345_cuf6|organism=Branchiostoma lanceolatum|type=polypeptide|length=164bp
LGQPLTIWRPGILFSQAKDVEFFEDFLYGRWDGAVTLFTRYTLTYKCQMV
LGAYPLDVQNCALGIDMYGARFLWGPKTEWFDEGKHPVVVRSSGINAQFR
LVKAQAFSYVNSYIERGRTCLYAASSCDFTSMEQECLSHDCISADQQGTA
KCEKCNFYGSCTST Run BLAST on NCBI mRNA from alignment at Sc0000070:892211..897147- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97345_cuf6 ID=transcript:BL97345_cuf6|Name=transcript:BL97345_cuf6|organism=Branchiostoma lanceolatum|type=mRNA|length=4937bp|location=Sequence derived from alignment at Sc0000070:892211..897147- (Branchiostoma lanceolatum)
TTGGGGCAGCCCCTTACCATCTGGAGACCAGGCATATTATTCAGCCAGGC
AAAAGATGTGGAGTTTTTCGAAGATTTCCTTTACGGGCGATGGGATGGGG
CTGTTACTTTGTTCACAAGGTATGTTGCTGCCTTCAGCTTCATACCATTT
TGCAATGACCATACCATGTATATTCTTTTAAATTTTATTATCATTTTGAT
ATTGGACAAGTTTTCATAAGTTATCTTAGTTTTAACAGTGACACATACAG
AGAACAGTAAGCTTGATAAGGTAAAGTCCCATCGTCCTTTTGAGGCCGTA
AGGGAAGTGGGTTGTTATCCTTCCACTGCCTTTTACCTCCAAAACTTACG
TCAAGTACCCATTTGTAAACCTGGGTGCCATTCCCAAGGGCACAACATCG
GTGACGTCAGGGATACGAACCAAGGAACACTCTTCTGTTACGCCACACGG
CCACACAGATACCATACATAATAGTATATCTTTGTTCACATGGAAGCTCA
TCTGTGTTGGTAGAGTACATATTGGAAATTTTAAACTATAATNACATGAA
AGCTCATCTGTGTTGGTAGAGTACATATTGGAAATTTTAAACTATAATCC
AACACAAAGAAGTTGAACTAACCATAAATTTTCGGCTGGTAACTCCAACC
TTCGTCAGATGTTCGAATCACTGCGTTGAACGCCGGGAAGTCGGAGACGT
GATGACGTCAGCAGTGAATCGAAAGCAGCGGGCAGACGGAATCTTCCACC
GTCGCGGTTCAGGGAGGGGTGATGAGCCCTGATGTAGATTGCCTCCTTCA
CGCCCCTCACAAACCAGTCCTGTTCCTTATCCAAAATGTGCACATTATCG
AGTGTCACTGTATGTCCCAGGGACTCAATATGTATGTGTTGAGACACTTC
TGACGTAATGGTGCTGGGACGTCTGTGCAAAAATCCAGTTTTGAGTGAAC
GTGACGTTTCCCCTATGTACGTCTCTGTACAAGGTCCTCTGATGTTCTGT
CCTGCACAACGTATGTGGTAGATCACCCCACAATTTTGTTCTTTTGGTGT
TTTGTCCTTGGGTGAAACTAACAACTGTCTTAGTGTCCGAGTTGGTTTGA
AGCAGGTCTTAATGCCATGCGTACTGAAAATCCTCCGCAGAGCCTCTGAG
AGATTTGCGACGTAAGGCAAGACGACCAAACCCTTATTCTGTCTCGTGGA
AGGCGTTTGAGTACTACTGCGTGTAGACGTCGGTCTGGGTGCAGTTGCCT
TGGCTACCGCCCACTTCGGGTAACCACAGTTTAACAAGGCCTGAGTGATG
TGTTCATTCTCCCTATCTCTGTCCTGGGGGTTGGTAATTACACTGTCCGC
CCTGTGGAAGAGAGTCCGGATGACCCCTAGTTTGTGTTCGAGAGGATGGT
TGGATTTAAAGTTTAAATATTGATCCGTGTGAGTGGGTTTTCTGTAGATC
CTTATGTCCAACGAACCATCATCTTTCACAACTGTGAGAGTATCCAGAAA
GGGCAGAGTTCTGTCCTGTTCTTCCTCTGTGGTAAATTTGATGTCTGGGT
CTAAACTGTTGAGATGTTCAGTGAATTTTTCAGCATGGGCCTTCTTCAAC
TTANGTAAATTTGATGTCTGGGTCCAAACTGTTGAGATGTTCAGTAAATT
CTTCAGCATGGGCCTTCTTCAATTTAGTGTGCGTATCATCCACGTAGCGA
TACCACCATAAAGGGGGATGTGGGGCAGTACTGATAGCTAGTTGTTCGAG
GTGTTCCATGAACAGGTTGCAAACAATTGGGGAAACTGGAGAGCCCATGG
CTGCTCCGTGAACCTGGCGGTAAAACTCTCCATTGTAAACAAAATACGTA
CAGTCTAGACAAACTTTCAACAAGTTGACAACATGTGCTGGTGAAAGTGT
AGACCGTTGTCCGAGGGTTGTATCTGCTTCTAGTCTCTGCCTAATAATGT
CCAGTGCTTTCCCTATCGGCACTGAGGTAAACAATGCTGTGGCGTCATAG
GAACGTAGCACTTCGTCGGCTTCTACTCTTTGTTGTTTTATTGTTTCCAC
AAATTGTTGTGAATTAGCAATATGGTGTGGCGATTGTCCAACCAAAGGGG
ATAAAATATCCGCTAAATGTTTCGCACTAGGATATGTAATCGAGTCAATA
CTGCTCACAATTGGTCTAAGGGGTGTTCCGTTCTTGTGGATTTTAGGCAG
TCCGTAAAATTTCGGTGGAAGCTCAGTAGTGGGATATAATTTTAAGTATT
TTGGGTGGTCTATTCCTTTTTCCTTTTCGATTTTTTGCAATACTTCAATC
AATAGTTTCTTGTAATCAGAAGGANAGGTAGTTTGTCGGCCTGGATGCAA
ACAGCTGGGACCTGTGCACGAGCGCGTCCTTGACCGCAGTGTAGCCGTTC
AGAACCACCACATCTTCCATCCCCATCCTGACGGTGAAGACGTCCCCGTA
CTGCCGCCTCCATTCCGTCAGCTTGAGGTGAGGCGCTCGGCTCAAGGCGA
GGAGGTGCCCGAGAACAGGCACACGTCCTGCCGGGTAAGGAGGCAGGTTT
CTGGGGTTACCCGAAGTGGGCGGTAGCCAAGGCAACTGCACCCAGACCGA
CGTCTACACGCAGTAGTACTCAAACGCCTTCCACGAGACAGAATAAGGGT
TTGGTTGTCTTGCCTTACGTCACAAATCTCTCAGAGGCTCTGCGGAGGAT
TTTCAGTACGCATGGCATTAAGACCTGCTTCAAACCAACTCGGACACTAA
GACAGTTGTTAGTTTCACCCAAGGACAAAACACCGAAAGAACAAAAGTGT
GGGGTGATCTACCACATACGTTGTGCAGGACAGAACATCAGAGGACCGTG
TACAGAGACGTACATAGGGGAAACGTCACGTTCACTCAAAACTAGATTTT
TGATGCACAGACGTCCCAGCACCATTACGTCAGAAGTGTCTCAACACATA
CATATTGAGTCCCCGGGACATACAGTGACACTCGATAATGTGCACATTTT
GGATAAGGAACAGGACTGGTTTGTGAGGGGCGTGAAGGAGGGCAATCTAC
ATCAGGGCTCATCACCCCTCCCTGAACCGCGACGGTGGAAGATTCCGTCT
GCCCGCTGCTTTCGATTCACTGCTGACGTCATCACGTCTCCGACTTCCCG
GCGTTCAACGCAGTGATTCGAACATCTGACGAAGGTTGGAGTTACCAGCC
GAAAATTTATGGTTAGTTCAACTTCTTTGTGTTGGATTATAGTTTAAAAT
TTCCAATATATATCTTTGTTCAGTTAGAACTGTTGACTTAGTCATTGCAC
ATCAAGATAACAATGGTTGCGATGTTGTCTTTTGTATATAATGTTTATTT
TACTTTATATCATTTTTTTTTTTTGTAGATACACGCTGACGTACAAGTGC
CAAATGGTGTTGGGCGCATATCCACTGGACGTTCAGAACTGTGCCCTGGG
CATTGACATGTGTATGTTCATCAATAGCATAATGTTGATTAGTTTGTAGT
TAGAATCTTAGACATTTTAAAATTTCTGCGAAAAGTATCATAATCATGTT
CATTGATTCGTCGATGAAAGTTAGACAACAAGGTAATAAGATACTACTAC
GCAAAAGAATCCCAGTTAGTAGACAGTAGTTACTCAAGCAACTGGATAAA
ATTTCGAAACAGTCAGACGTTCAGTGACTAAAGAAGGATCTGGTAAAACT
AGGTTTTATACCAAAACTCTGAATAGATATGTTGATGAAGGGAAGACATT
TTCAGATGGTTCAATAGGATAGTAAGTTAAGACAAGGTTGTATGCTAATG
AATCAATTAGCTCCTGTTGTTTTAAAACCTAGTTCTACCCGATCCAAGTA
TAAAACCTAGTTCTACCAGATCCTTCTGTAGTCACTGACGAAAGATAGCG
GATGCTGTCTGACACGTTTGACTGTTTCGAAATTTTATCCAGTTGCTTGA
GTATCCGCTGTCTTTCGGCAGTGACTAAAGGAAGAACAGGAGAACCACGT
TTTATACCTGGTCTTTGAATTAGTACAATTTTAGGATGGTACAATAGAAG
ACGAAGTCAAGAAAAGGTTGTACGCTGAATAGTCAATTAGCTCCAGACCT
TTTGGTTGAGTACAGGAGCTAATATTCTTCATTAACTCATTGTTATTCCT
AATGCCATCTCCCCATTGTTTTAGTGTCCTTAGCTGTTGAATGAGAGTGA
TTATGGACGATATGATTGCTTTTTAGATGGAGCCCGTTTTCTATGGGGTC
CAAAGACGGAGTGGTTCGATGAAGGCAAGCATCCGGTTGTCGTGAGGTCG
TCTGGTATCAACGCGCAGTTCCGGCTTGTCAAAGCACAAGCCTTCTCTTA
TGTCAACTCCTACATCGAACGTGGTGAGTATGCATTTAACCAGAGGTGTT
CATCGATCAGTTTGTATGACTTTATGTCTTGAACATCTTTGGTTTAAACA
AAAGATCTGCCACGTATGCCATTTGATATCCAGGTTATGCAAGCAAATCT
TATTTATTGGCATGTAAACGTTGGATTATCTAGCAACTACTCATTTTATT
GTCGTATTCGTATATGTACCCATATGTACGGCTTTTCGTAACCTGGTCCC
GAGTTGATTTTAGCTGCGAGTTAAAAAAAACACGGGGCCTGGCCGTGCCC
ACGGGGTCAAGTAGAGGCCACACCCGAAAGTACAAAAACAGCCCGTAAAC
TAGCCGACAGGGCCCCCTTTTACAATTGTGATTATAACATTGGTAAATGC
TTCTAAGTTTATGTTCTGCACATGTGTGGATGTGTGTTTGTAGGGAGAAC
CTGTCTCTACGCAGCTTCGTCTTGTGACTTCACCTCAATGGAACAAGAGT
GCTTGTCGCACGACTGCATTAGTGCAGACCAACAGGGGACTGCAAAATGC
GAGAAGTGCAACTTCTATGGAAGCTGTACATCTACAG Coding sequence (CDS) from alignment at Sc0000070:892211..897147- >transcript:BL97345_cuf6 ID=transcript:BL97345_cuf6|Name=transcript:BL97345_cuf6|organism=Branchiostoma lanceolatum|type=CDS|length=1968bp|location=Sequence derived from alignment at Sc0000070:892211..897147- (Branchiostoma lanceolatum)
TTGGGGCAGCCCCTTACCATCTGGAGACCAGGCATATTATTCAGCCAGGC
AAAAGATGTGGAGTTTTTCGAAGATTTCCTTTACGGGCGATGGGATGGGG
CTGTTACTTTGTTCACAAGATACACGCTGACGTACAAGTGCCAAATGGTG
TTGGGCGCATATCCACTGGACGTTCAGAACTGTGCCCTGGGCATTGACAT
GTATGGAGCCCGTTTTCTATGGGGTCCAAAGACGGAGTGGTTCGATGAAG
GCAAGCATCCGGTTGTCGTGAGGTCGTCTGGTATCAACGCGCAGTTCCGG
CTTGTCAAAGCACAAGCCTTCTCTTATGTCAACTCCTACATCGAACGTGG
GAGAACCTGTCTCTACGCAGCTTCGTCTTGTGACTTCACCTCAATGGAAC
AAGAGTGCTTGTCGCACGACTGCATTAGTGCAGACCAACAGGGGACTGCA
AAATGCGAGAAGTGCAACTTCTATGGAAGCTGTACATCTACATTGGGGCA
GCCCCTTACCATCTGGAGACCAGGCATATTATTCAGCCAGGCAAAAGATG
TGGAGTTTTTCGAAGATTTCCTTTACGGGCGATGGGATGGGGCTGTTACT
TTGTTCACAAGATACACGCTGACGTACAAGTGCCAAATGGTGTTGGGCGC
ATATCCACTGGACGTTCAGAACTGTGCCCTGGGCATTGACATGTATGGAG
CCCGTTTTCTATGGGGTCCAAAGACGGAGTGGTTCGATGAAGGCAAGCAT
CCGGTTGTCGTGAGGTCGTCTGGTATCAACGCGCAGTTCCGGCTTGTCAA
AGCACAAGCCTTCTCTTATGTCAACTCCTACATCGAACGTGGGAGAACCT
GTCTCTACGCAGCTTCGTCTTGTGACTTCACCTCAATGGAACAAGAGTGC
TTGTCGCACGACTGCATTAGTGCAGACCAACAGGGGACTGCAAAATGCGA
GAAGTGCAACTTCTATGGAAGCTGTACATCTACATTGGGGCAGCCCCTTA
CCATCTGGAGACCAGGCATATTATTCAGCCAGGCAAAAGATGTGGAGTTT
TTCGAAGATTTCCTTTACGGGCGATGGGATGGGGCTGTTACTTTGTTCAC
AAGATACACGCTGACGTACAAGTGCCAAATGGTGTTGGGCGCATATCCAC
TGGACGTTCAGAACTGTGCCCTGGGCATTGACATGTATGGAGCCCGTTTT
CTATGGGGTCCAAAGACGGAGTGGTTCGATGAAGGCAAGCATCCGGTTGT
CGTGAGGTCGTCTGGTATCAACGCGCAGTTCCGGCTTGTCAAAGCACAAG
CCTTCTCTTATGTCAACTCCTACATCGAACGTGGGAGAACCTGTCTCTAC
GCAGCTTCGTCTTGTGACTTCACCTCAATGGAACAAGAGTGCTTGTCGCA
CGACTGCATTAGTGCAGACCAACAGGGGACTGCAAAATGCGAGAAGTGCA
ACTTCTATGGAAGCTGTACATCTACATTGGGGCAGCCCCTTACCATCTGG
AGACCAGGCATATTATTCAGCCAGGCAAAAGATGTGGAGTTTTTCGAAGA
TTTCCTTTACGGGCGATGGGATGGGGCTGTTACTTTGTTCACAAGATACA
CGCTGACGTACAAGTGCCAAATGGTGTTGGGCGCATATCCACTGGACGTT
CAGAACTGTGCCCTGGGCATTGACATGTATGGAGCCCGTTTTCTATGGGG
TCCAAAGACGGAGTGGTTCGATGAAGGCAAGCATCCGGTTGTCGTGAGGT
CGTCTGGTATCAACGCGCAGTTCCGGCTTGTCAAAGCACAAGCCTTCTCT
TATGTCAACTCCTACATCGAACGTGGGAGAACCTGTCTCTACGCAGCTTC
GTCTTGTGACTTCACCTCAATGGAACAAGAGTGCTTGTCGCACGACTGCA
TTAGTGCAGACCAACAGGGGACTGCAAAATGCGAGAAGTGCAACTTCTAT
GGAAGCTGTACATCTACA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000070 | genome | Sc0000070:892211..897147 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97345_cuf6 |
| Biotype | protein_coding |
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