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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97343_cuf2 >transcript:BL97343_cuf2-protein ID=transcript:BL97343_cuf2-protein|Name=transcript:BL97343_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=372bp
VEEAAEVLEAHIVTTLSQQCQHLILIGDHQQLRPNPTVYQLAKKYNMDIS
LFERMVKNDMQCQRLQSQHRMRPEFARLLTSHIYESLDDHESVLNYENIK
GVSSNMFFVDHSYWEAHDSDTKSRSNMHEAQFMASFCRYLIQQGYSPSQI
TILTTYTGQLFNFKKVMPRQDFEGVRVSVVDNFQGEESDIILLSLVRSND
EGNVGFLKVENRVCVALSRAKKGFYALGNLTMLSQTSTLWSKIIQELREQ
SCVGKHLTLSCQNHPDTIIMADTEKDFEKAPKGGCMRPCDFRLMCGHVCA
SICHPIEPEHKEYKCKKPCVNVLCDLGHKCPKICYETCGDCQVLLEKTIP
KCQHKQMVACFTSPSEFICRIP Run BLAST on NCBI mRNA from alignment at Sc0000070:731553..733648+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97343_cuf2 ID=transcript:BL97343_cuf2|Name=transcript:BL97343_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=2096bp|location=Sequence derived from alignment at Sc0000070:731553..733648+ (Branchiostoma lanceolatum)
GTGGAGGAGGCAGCAGAAGTGTTGGAGGCCCACATCGTCACAACGCTGTC
TCAGCAGTGCCAACATCTCATCCTAATCGGCGATCACCAACAACTTCGTC
CCAACCCAACCGTCTACCAACTGGCGAAGAAATACAACATGGATATCTCC
CTGTTTGAACGAATGGTAAAGAACGACATGCAGTGTCAGCGGCTTCAGTC
ACAGCATCGCATGCGGCCGGAGTTCGCACGTCTCCTGACGTCGCATATCT
ACGAGTCGCTGGACGACCACGAATCGGTGCTCAACTACGAGAACATCAAG
GGCGTCTCGTCCAACATGTTCTTCGTAGATCACAGCTACTGGGAAGCACA
CGACAGCGACACTAAGAGCCGGTCTAACATGCACGAGGCTCAATTCATGG
CCAGCTTCTGTCGCTACCTGATTCAGCAAGGATACAGCCCGTCCCAGATC
ACCATCCTCACCACGTACACGGGCCAACTCTTCAACTTCAAGAAGGTCAT
GCCCCGGCAGGACTTCGAGGGTGTTCGCGTCTCCGTCGTGGACAACTTTC
AGGGAGAAGAGAGTGACATCATCCTGCTGTCACTGGTGCGGAGCAACGAC
GAGGGCAACGTGGGCTTTCTCAAGGTAGGCTAATGCATGATACGATTCAT
AGCGTACAAAGACAATTCAAACTCTACAACTGGATAAAATTCGGAGATTT
ACTTCGAGACGTTCGAGTGACATCCATTACCGTTCTTCACTAGAATGAAC
GGGCAGAACGAATCAATACTAGTACATCTAAGTGGGAAAAACTGTTGAAC
ATGTCAAACTCACTAACTCATAAGGATCGTACTATGCAAATGTCACTCAA
ATGCAAATCAAGGTGGGATAGTTCCTNGATAGATCCTATGGTTAGAGAAC
ACCATTGGAACTGTTACAGTCCTTTGCGTTGTAAAGCGGGGTCCCATGCA
CTGTAGAGTTCCATGCAAAGTCCTCCTTTCCGGCTTAAAATGGCAATTCA
TTTTACCCAGGACAACAGCAATAAGGAATCACTCCCCATCGTGACCTTGC
CTAAAGTTGGAGGTGTGAATCGACCCTGATAACAATATTAACACATAATA
ATCCAGTTCATTCTTGTGGAACTGAAGAAGAGTGATGGATTGTTGGTTAT
TTGACGAATATCAATGTTTATGGTCACGTGCTTGTGGCCTAAAGTTTCCA
ATGAGACATCATTTATGTTAGGAGTAGTTGATGATGATGTATGTGTTGAC
CTAAATGTCATTTCTATATTCTTCTCTCTCTTTAGGTAGAAAACCGCGTT
TGTGTGGCTCTTTCTCGAGCGAAGAAAGGTTTCTACGCCTTAGGCAACCT
GACAATGCTGTCGCAGACTAGCACATTGTGGAGCAAGGTAACATACAAGT
CAGTTTGTATACTCTTCAAATTCATTTAAAACATTTTTACACGTTGTCTG
ATGACTCTTAATATTCTGTCGTTTCTTTCCAGATCATCCAAGAACTGCGG
GAGCAAAGCTGTGTGGGAAAGCACCTCACGTTGTCCTGCCAAAACCACCC
TGATACCATCATTATGGCGGACACTGAGAAAGACTTTGAAAAGGCACCTA
AAGGTGGCTGTATGAGGCCCTGTGATTTCAGGCAAGTAGACAGATTTGTG
CATCAACGAGTATACTCACTGGAATAGCAAATTCCCCGATTGTATGCCTT
TTTTCTGCTGCAAAAATCTACTATTATAAACAAAATGATATCTTAATATC
TGTTGATGTCATATGTCATGTCTGAAGCACAATCTTCTACAATAGATACC
AACAATAGAATTGCACACATGTTGATAACGACAACGATTGTCTTTCATAT
ACAGGTTGATGTGTGGCCATGTCTGCGCAAGCATATGTCACCCAATAGAA
CCCGAGCACAAGGAGTACAAGTGCAAGAAGCCTTGTGTAAATGTCTTATG
TGACCTCGGCCATAAGTGCCCTAAGATCTGCTATGAGACCTGTGGCGACT
GCCAGGTGCTTTTAGAAAAGACCATCCCCAAATGCCAACACAAGCAGATG
GTCGCATGCTTTACATCTCCATCTGAATTCATCTGCCGGATACCGT Coding sequence (CDS) from alignment at Sc0000070:731553..733648+ >transcript:BL97343_cuf2 ID=transcript:BL97343_cuf2|Name=transcript:BL97343_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=4464bp|location=Sequence derived from alignment at Sc0000070:731553..733648+ (Branchiostoma lanceolatum)
GTGGAGGAGGCAGCAGAAGTGTTGGAGGCCCACATCGTCACAACGCTGTC
TCAGCAGTGCCAACATCTCATCCTAATCGGCGATCACCAACAACTTCGTC
CCAACCCAACCGTCTACCAACTGGCGAAGAAATACAACATGGATATCTCC
CTGTTTGAACGAATGGTAAAGAACGACATGCAGTGTCAGCGGCTTCAGTC
ACAGCATCGCATGCGGCCGGAGTTCGCACGTCTCCTGACGTCGCATATCT
ACGAGTCGCTGGACGACCACGAATCGGTGCTCAACTACGAGAACATCAAG
GGCGTCTCGTCCAACATGTTCTTCGTAGATCACAGCTACTGGGAAGCACA
CGACAGCGACACTAAGAGCCGGTCTAACATGCACGAGGCTCAATTCATGG
CCAGCTTCTGTCGCTACCTGATTCAGCAAGGATACAGCCCGTCCCAGATC
ACCATCCTCACCACGTACACGGGCCAACTCTTCAACTTCAAGAAGGTCAT
GCCCCGGCAGGACTTCGAGGGTGTTCGCGTCTCCGTCGTGGACAACTTTC
AGGGAGAAGAGAGTGACATCATCCTGCTGTCACTGGTGCGGAGCAACGAC
GAGGGCAACGTGGGCTTTCTCAAGGTAGAAAACCGCGTTTGTGTGGCTCT
TTCTCGAGCGAAGAAAGGTTTCTACGCCTTAGGCAACCTGACAATGCTGT
CGCAGACTAGCACATTGTGGAGCAAGATCATCCAAGAACTGCGGGAGCAA
AGCTGTGTGGGAAAGCACCTCACGTTGTCCTGCCAAAACCACCCTGATAC
CATCATTATGGCGGACACTGAGAAAGACTTTGAAAAGGCACCTAAAGGTG
GCTGTATGAGGCCCTGTGATTTCAGGTTGATGTGTGGCCATGTCTGCGCA
AGCATATGTCACCCAATAGAACCCGAGCACAAGGAGTACAAGTGCAAGAA
GCCTTGTGTAAATGTCTTATGTGACCTCGGCCATAAGTGCCCTAAGATCT
GCTATGAGACCTGTGGCGACTGCCAGGTGCTTTTAGAAAAGACCATCCCC
AAATGCCAACACAAGCAGATGGTCGCATGCTTTACATCTCCATCTGAATT
CATCTGCCGGATACCGGTGGAGGAGGCAGCAGAAGTGTTGGAGGCCCACA
TCGTCACAACGCTGTCTCAGCAGTGCCAACATCTCATCCTAATCGGCGAT
CACCAACAACTTCGTCCCAACCCAACCGTCTACCAACTGGCGAAGAAATA
CAACATGGATATCTCCCTGTTTGAACGAATGGTAAAGAACGACATGCAGT
GTCAGCGGCTTCAGTCACAGCATCGCATGCGGCCGGAGTTCGCACGTCTC
CTGACGTCGCATATCTACGAGTCGCTGGACGACCACGAATCGGTGCTCAA
CTACGAGAACATCAAGGGCGTCTCGTCCAACATGTTCTTCGTAGATCACA
GCTACTGGGAAGCACACGACAGCGACACTAAGAGCCGGTCTAACATGCAC
GAGGCTCAATTCATGGCCAGCTTCTGTCGCTACCTGATTCAGCAAGGATA
CAGCCCGTCCCAGATCACCATCCTCACCACGTACACGGGCCAACTCTTCA
ACTTCAAGAAGGTCATGCCCCGGCAGGACTTCGAGGGTGTTCGCGTCTCC
GTCGTGGACAACTTTCAGGGAGAAGAGAGTGACATCATCCTGCTGTCACT
GGTGCGGAGCAACGACGAGGGCAACGTGGGCTTTCTCAAGGTAGAAAACC
GCGTTTGTGTGGCTCTTTCTCGAGCGAAGAAAGGTTTCTACGCCTTAGGC
AACCTGACAATGCTGTCGCAGACTAGCACATTGTGGAGCAAGATCATCCA
AGAACTGCGGGAGCAAAGCTGTGTGGGAAAGCACCTCACGTTGTCCTGCC
AAAACCACCCTGATACCATCATTATGGCGGACACTGAGAAAGACTTTGAA
AAGGCACCTAAAGGTGGCTGTATGAGGCCCTGTGATTTCAGGTTGATGTG
TGGCCATGTCTGCGCAAGCATATGTCACCCAATAGAACCCGAGCACAAGG
AGTACAAGTGCAAGAAGCCTTGTGTAAATGTCTTATGTGACCTCGGCCAT
AAGTGCCCTAAGATCTGCTATGAGACCTGTGGCGACTGCCAGGTGCTTTT
AGAAAAGACCATCCCCAAATGCCAACACAAGCAGATGGTCGCATGCTTTA
CATCTCCATCTGAATTCATCTGCCGGATACCGGTGGAGGAGGCAGCAGAA
GTGTTGGAGGCCCACATCGTCACAACGCTGTCTCAGCAGTGCCAACATCT
CATCCTAATCGGCGATCACCAACAACTTCGTCCCAACCCAACCGTCTACC
AACTGGCGAAGAAATACAACATGGATATCTCCCTGTTTGAACGAATGGTA
AAGAACGACATGCAGTGTCAGCGGCTTCAGTCACAGCATCGCATGCGGCC
GGAGTTCGCACGTCTCCTGACGTCGCATATCTACGAGTCGCTGGACGACC
ACGAATCGGTGCTCAACTACGAGAACATCAAGGGCGTCTCGTCCAACATG
TTCTTCGTAGATCACAGCTACTGGGAAGCACACGACAGCGACACTAAGAG
CCGGTCTAACATGCACGAGGCTCAATTCATGGCCAGCTTCTGTCGCTACC
TGATTCAGCAAGGATACAGCCCGTCCCAGATCACCATCCTCACCACGTAC
ACGGGCCAACTCTTCAACTTCAAGAAGGTCATGCCCCGGCAGGACTTCGA
GGGTGTTCGCGTCTCCGTCGTGGACAACTTTCAGGGAGAAGAGAGTGACA
TCATCCTGCTGTCACTGGTGCGGAGCAACGACGAGGGCAACGTGGGCTTT
CTCAAGGTAGAAAACCGCGTTTGTGTGGCTCTTTCTCGAGCGAAGAAAGG
TTTCTACGCCTTAGGCAACCTGACAATGCTGTCGCAGACTAGCACATTGT
GGAGCAAGATCATCCAAGAACTGCGGGAGCAAAGCTGTGTGGGAAAGCAC
CTCACGTTGTCCTGCCAAAACCACCCTGATACCATCATTATGGCGGACAC
TGAGAAAGACTTTGAAAAGGCACCTAAAGGTGGCTGTATGAGGCCCTGTG
ATTTCAGGTTGATGTGTGGCCATGTCTGCGCAAGCATATGTCACCCAATA
GAACCCGAGCACAAGGAGTACAAGTGCAAGAAGCCTTGTGTAAATGTCTT
ATGTGACCTCGGCCATAAGTGCCCTAAGATCTGCTATGAGACCTGTGGCG
ACTGCCAGGTGCTTTTAGAAAAGACCATCCCCAAATGCCAACACAAGCAG
ATGGTCGCATGCTTTACATCTCCATCTGAATTCATCTGCCGGATACCGGT
GGAGGAGGCAGCAGAAGTGTTGGAGGCCCACATCGTCACAACGCTGTCTC
AGCAGTGCCAACATCTCATCCTAATCGGCGATCACCAACAACTTCGTCCC
AACCCAACCGTCTACCAACTGGCGAAGAAATACAACATGGATATCTCCCT
GTTTGAACGAATGGTAAAGAACGACATGCAGTGTCAGCGGCTTCAGTCAC
AGCATCGCATGCGGCCGGAGTTCGCACGTCTCCTGACGTCGCATATCTAC
GAGTCGCTGGACGACCACGAATCGGTGCTCAACTACGAGAACATCAAGGG
CGTCTCGTCCAACATGTTCTTCGTAGATCACAGCTACTGGGAAGCACACG
ACAGCGACACTAAGAGCCGGTCTAACATGCACGAGGCTCAATTCATGGCC
AGCTTCTGTCGCTACCTGATTCAGCAAGGATACAGCCCGTCCCAGATCAC
CATCCTCACCACGTACACGGGCCAACTCTTCAACTTCAAGAAGGTCATGC
CCCGGCAGGACTTCGAGGGTGTTCGCGTCTCCGTCGTGGACAACTTTCAG
GGAGAAGAGAGTGACATCATCCTGCTGTCACTGGTGCGGAGCAACGACGA
GGGCAACGTGGGCTTTCTCAAGGTAGAAAACCGCGTTTGTGTGGCTCTTT
CTCGAGCGAAGAAAGGTTTCTACGCCTTAGGCAACCTGACAATGCTGTCG
CAGACTAGCACATTGTGGAGCAAGATCATCCAAGAACTGCGGGAGCAAAG
CTGTGTGGGAAAGCACCTCACGTTGTCCTGCCAAAACCACCCTGATACCA
TCATTATGGCGGACACTGAGAAAGACTTTGAAAAGGCACCTAAAGGTGGC
TGTATGAGGCCCTGTGATTTCAGGTTGATGTGTGGCCATGTCTGCGCAAG
CATATGTCACCCAATAGAACCCGAGCACAAGGAGTACAAGTGCAAGAAGC
CTTGTGTAAATGTCTTATGTGACCTCGGCCATAAGTGCCCTAAGATCTGC
TATGAGACCTGTGGCGACTGCCAGGTGCTTTTAGAAAAGACCATCCCCAA
ATGCCAACACAAGCAGATGGTCGCATGCTTTACATCTCCATCTGAATTCA
TCTGCCGGATACCG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000070 | genome | Sc0000070:731553..733648 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97343_cuf2 |
| Biotype | protein_coding |
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