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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97330_cuf5 >transcript:BL97330_cuf5-protein ID=transcript:BL97330_cuf5-protein|Name=transcript:BL97330_cuf5|organism=Branchiostoma lanceolatum|type=polypeptide|length=203bp
GVYYVTVVALNLAGLEETVYTNGVTVLMAEPNTSSANISVPGAVPIAPGA
VSSEDQTSLSFMWTAVEDAGIDAYYFSVGSAQSKLDDIVPRTQVGVNGSG
YVFIHDGIVEFEGFNGDMSDMRERTIDDANKTFPNNFLMEPGRNLFVNMD
ACNAGHKCGGIQSPIVVIRRDGDAIGTSTNGEDLTLVCVGHPSDGANATV
VVE Run BLAST on NCBI mRNA from alignment at Sc0000207:409311..410567+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97330_cuf5 ID=transcript:BL97330_cuf5|Name=transcript:BL97330_cuf5|organism=Branchiostoma lanceolatum|type=mRNA|length=1257bp|location=Sequence derived from alignment at Sc0000207:409311..410567+ (Branchiostoma lanceolatum)
AGGCGTCTACTACGTCACTGTTGTGGCTCTCAACTTAGCCGGACTTGAAG
AGACTGTATACACTAATGGTGAATGTTAGATTGCATATTGTACAGATCAG
TGTCTTCGCGTGTACTTTTTTTTGGGATTATATTTCTTAACTTAACTTAC
TTAGGGGCTATCTAAAAGTCAAGCTGCTACGTATTTTTGTGGGTTTCTTT
TCCTTGATGTGTTGTCATCTGCATAAAACAGAGACGTAGAAACAGGTATA
TCGTAACGTCACAAATGTGTGCTTTTACAGGGGTAACTGTTTTGATGGCT
GAACCTAACACTTCAAGTGCCAACATCTCCGTCCCCGGCGCCGTGCCGAT
AGCTCCGGGTGCAGTGTCGTCCGAGGACCAGACCAGTCTCAGTTTCATGT
GGACTGCAGTAGAGGACGCTGGCATAGACGCATACTGTGAGTTGATTCAC
AAATAAAGAAATTACAACATTTGAAATAACGATTGATAAAATGGTATAGT
AGTAAAGGACTGCCAGTTTTTGTATGTACGTTAAACAATCTGTTTCCCAC
CATTAAAAATGTGATGATTGTAAATGATTTGTTATTATGTATTTTTTATT
CAGGCCTCTGTTATTTCTAGCATCTTGTTTTATTTTCTTTACAGACTTCA
GTGTCGGTAGTGCACAAAGCAAACTAGATGATATCGTTCCCCGCACTCAA
GTTGGAGTTAACGGATCCGGATACGTTTTTATCCATGATGGCATCGTTGA
ATTTGAGGGGTTCAACGGTGATATGTCCGACATGAGAGAGAGGACTATCG
ACGATGCCAACAAAACGTTTCCTAACAACTTCCTGATGGAGCCTGGAAGG
TATGGTATTTTTCAACTTCTCTAGTCTCGGTGTGGCAAAGACATGTGTGG
TTAACATCATCGCTGCTTCCAATATTGACTTGTTGTAATGAGTGTCCTTT
TTTTTCTCCTTCAGAAATCTATTTGTGAATATGGATGCATGTAATGCAGG
CCATAAGTGTGGTGGAATTCAGTCACCGATCGTTGTGATACGCCGTAAGT
ACATATATTGGGTTTACAAAATCTAGGCAATTGTTTTAACATAGCTTGGG
AATCAGATCATATATCTGTACAGATAAAAACAAGCACATCTTTGTTGGTT
TAAGGTGACGGTGATGCTATTGGAACATCAACAAATGGAGAGGACCTTAC
CTTGGTATGCGTAGGACATCCTTCTGACGGAGCCAATGCTACAGTGGTCG
TGGAAAC Coding sequence (CDS) from alignment at Sc0000207:409311..410567+ >transcript:BL97330_cuf5 ID=transcript:BL97330_cuf5|Name=transcript:BL97330_cuf5|organism=Branchiostoma lanceolatum|type=CDS|length=3045bp|location=Sequence derived from alignment at Sc0000207:409311..410567+ (Branchiostoma lanceolatum)
GGCGTCTACTACGTCACTGTTGTGGCTCTCAACTTAGCCGGACTTGAAGA
GACTGTATACACTAATGGGGTAACTGTTTTGATGGCTGAACCTAACACTT
CAAGTGCCAACATCTCCGTCCCCGGCGCCGTGCCGATAGCTCCGGGTGCA
GTGTCGTCCGAGGACCAGACCAGTCTCAGTTTCATGTGGACTGCAGTAGA
GGACGCTGGCATAGACGCATACTACTTCAGTGTCGGTAGTGCACAAAGCA
AACTAGATGATATCGTTCCCCGCACTCAAGTTGGAGTTAACGGATCCGGA
TACGTTTTTATCCATGATGGCATCGTTGAATTTGAGGGGTTCAACGGTGA
TATGTCCGACATGAGAGAGAGGACTATCGACGATGCCAACAAAACGTTTC
CTAACAACTTCCTGATGGAGCCTGGAAGAAATCTATTTGTGAATATGGAT
GCATGTAATGCAGGCCATAAGTGTGGTGGAATTCAGTCACCGATCGTTGT
GATACGCCGTGACGGTGATGCTATTGGAACATCAACAAATGGAGAGGACC
TTACCTTGGTATGCGTAGGACATCCTTCTGACGGAGCCAATGCTACAGTG
GTCGTGGAAGGCGTCTACTACGTCACTGTTGTGGCTCTCAACTTAGCCGG
ACTTGAAGAGACTGTATACACTAATGGGGTAACTGTTTTGATGGCTGAAC
CTAACACTTCAAGTGCCAACATCTCCGTCCCCGGCGCCGTGCCGATAGCT
CCGGGTGCAGTGTCGTCCGAGGACCAGACCAGTCTCAGTTTCATGTGGAC
TGCAGTAGAGGACGCTGGCATAGACGCATACTACTTCAGTGTCGGTAGTG
CACAAAGCAAACTAGATGATATCGTTCCCCGCACTCAAGTTGGAGTTAAC
GGATCCGGATACGTTTTTATCCATGATGGCATCGTTGAATTTGAGGGGTT
CAACGGTGATATGTCCGACATGAGAGAGAGGACTATCGACGATGCCAACA
AAACGTTTCCTAACAACTTCCTGATGGAGCCTGGAAGAAATCTATTTGTG
AATATGGATGCATGTAATGCAGGCCATAAGTGTGGTGGAATTCAGTCACC
GATCGTTGTGATACGCCGTGACGGTGATGCTATTGGAACATCAACAAATG
GAGAGGACCTTACCTTGGTATGCGTAGGACATCCTTCTGACGGAGCCAAT
GCTACAGTGGTCGTGGAAGGCGTCTACTACGTCACTGTTGTGGCTCTCAA
CTTAGCCGGACTTGAAGAGACTGTATACACTAATGGGGTAACTGTTTTGA
TGGCTGAACCTAACACTTCAAGTGCCAACATCTCCGTCCCCGGCGCCGTG
CCGATAGCTCCGGGTGCAGTGTCGTCCGAGGACCAGACCAGTCTCAGTTT
CATGTGGACTGCAGTAGAGGACGCTGGCATAGACGCATACTACTTCAGTG
TCGGTAGTGCACAAAGCAAACTAGATGATATCGTTCCCCGCACTCAAGTT
GGAGTTAACGGATCCGGATACGTTTTTATCCATGATGGCATCGTTGAATT
TGAGGGGTTCAACGGTGATATGTCCGACATGAGAGAGAGGACTATCGACG
ATGCCAACAAAACGTTTCCTAACAACTTCCTGATGGAGCCTGGAAGAAAT
CTATTTGTGAATATGGATGCATGTAATGCAGGCCATAAGTGTGGTGGAAT
TCAGTCACCGATCGTTGTGATACGCCGTGACGGTGATGCTATTGGAACAT
CAACAAATGGAGAGGACCTTACCTTGGTATGCGTAGGACATCCTTCTGAC
GGAGCCAATGCTACAGTGGTCGTGGAAGGCGTCTACTACGTCACTGTTGT
GGCTCTCAACTTAGCCGGACTTGAAGAGACTGTATACACTAATGGGGTAA
CTGTTTTGATGGCTGAACCTAACACTTCAAGTGCCAACATCTCCGTCCCC
GGCGCCGTGCCGATAGCTCCGGGTGCAGTGTCGTCCGAGGACCAGACCAG
TCTCAGTTTCATGTGGACTGCAGTAGAGGACGCTGGCATAGACGCATACT
ACTTCAGTGTCGGTAGTGCACAAAGCAAACTAGATGATATCGTTCCCCGC
ACTCAAGTTGGAGTTAACGGATCCGGATACGTTTTTATCCATGATGGCAT
CGTTGAATTTGAGGGGTTCAACGGTGATATGTCCGACATGAGAGAGAGGA
CTATCGACGATGCCAACAAAACGTTTCCTAACAACTTCCTGATGGAGCCT
GGAAGAAATCTATTTGTGAATATGGATGCATGTAATGCAGGCCATAAGTG
TGGTGGAATTCAGTCACCGATCGTTGTGATACGCCGTGACGGTGATGCTA
TTGGAACATCAACAAATGGAGAGGACCTTACCTTGGTATGCGTAGGACAT
CCTTCTGACGGAGCCAATGCTACAGTGGTCGTGGAAGGCGTCTACTACGT
CACTGTTGTGGCTCTCAACTTAGCCGGACTTGAAGAGACTGTATACACTA
ATGGGGTAACTGTTTTGATGGCTGAACCTAACACTTCAAGTGCCAACATC
TCCGTCCCCGGCGCCGTGCCGATAGCTCCGGGTGCAGTGTCGTCCGAGGA
CCAGACCAGTCTCAGTTTCATGTGGACTGCAGTAGAGGACGCTGGCATAG
ACGCATACTACTTCAGTGTCGGTAGTGCACAAAGCAAACTAGATGATATC
GTTCCCCGCACTCAAGTTGGAGTTAACGGATCCGGATACGTTTTTATCCA
TGATGGCATCGTTGAATTTGAGGGGTTCAACGGTGATATGTCCGACATGA
GAGAGAGGACTATCGACGATGCCAACAAAACGTTTCCTAACAACTTCCTG
ATGGAGCCTGGAAGAAATCTATTTGTGAATATGGATGCATGTAATGCAGG
CCATAAGTGTGGTGGAATTCAGTCACCGATCGTTGTGATACGCCGTGACG
GTGATGCTATTGGAACATCAACAAATGGAGAGGACCTTACCTTGGTATGC
GTAGGACATCCTTCTGACGGAGCCAATGCTACAGTGGTCGTGGAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000207 | genome | Sc0000207:409311..410567 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97330_cuf5 |
| Biotype | protein_coding |
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