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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97326_cuf1 >transcript:BL97326_cuf1-protein ID=transcript:BL97326_cuf1-protein|Name=transcript:BL97326_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=144bp
GGCFPRFWLLRNSAASFATCTSQSSGRGISKNHRIEEQTMRDLQLMVEQR
MEGREIDVAEIFTDLHNLITGVGVVVPHVANIVDIFSNHDIKFEADVPLT
ALNVDLFRLHWPYMLGPVPLIFGFGAGVNGGARAHATFHLRSMK Run BLAST on NCBI mRNA from alignment at Sc0000207:385575..386942+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97326_cuf1 ID=transcript:BL97326_cuf1|Name=transcript:BL97326_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=1368bp|location=Sequence derived from alignment at Sc0000207:385575..386942+ (Branchiostoma lanceolatum)
CCGGTGGATGCTTCCCGCGATTTTGGTTGTTGCGGAACTCAGCGGCAAGT
TTCGCAACATGCACCTCACAATCGTCCGGGCGCGGGATCAGCAAAAACCG
TAAGGATTATGTAATTATGCTATTGCTCATTTTAAAATCGCGTTTACAGT
GGCAAAGTATGTTCTTAAATAGTAATTGAATTTGAAAACATATCTATAGC
TTGAGCGACTTTTTTTTAGAATGTGTTCATTTTGCTTAGGAGGCCATTAT
TTTTTATACAGTGGTATCATTTATTTGCTCTCAAGCGATGGTTTTCCAGC
TATTCCTATTTCTCTCAATATTGAGGCTTTTGTTTTCCAATTAAAGTTAA
TATTGTATTTCCTCTTGTTACCAAGACCGAATAGAGGAACAGACAATGCG
GGATTTGCAATTGATGGTTGAACAGCGCATGGAAGGCCGGGAAATCGACG
TTGCAGAGATATTCACTGACCTACACAATCTGGCAAGAACATTTCTATAC
TTAAAATATAAAATGCACAAATAAACAATTCCAAAAGCTCACCTTGATAT
CTTATTGGAAACACAATATGTTAATATCATTATTTGCTACATGCTATACA
AATGCATATCGAAGAAAAATTGTTTTCGATTCCTATCTTATGCATTTGCA
TGGCACTTAAAGATTTCTTGGAACACAAGAGACAAAGACTACCCACCTTG
TCTATGAAATGTGGTGTCCAATGATACTTAGTTAAAAATCCTCGTTTCCT
TGCTCGCAGATCACAGGTGTTGGGGTTGTCGTGCCACATGTGGCTAATAT
AGTCGATATCTTCTCAAACCACGACATCAAGTTTGAGGCAGATGTACCAT
TGACGGCTTTGAACGTAGACTTATTCAGACTACATTGGCCATACATGCTA
GGACCTGTTCCTTTGATATTTGGTGAGTCTTTATTTTCACTTTCCAATCT
ATGAGATTGGTCTTAAATCTACAAAATGTTTCTGACAGGTATAATGTATA
AAGAAGTCAGGAAAGGAAATTCGAACACATGCATGGTGCTACTAATTACC
CTCAATTTATAATTACCTCATAAGACAATGCAATTATTTAATGGCGACAA
ACTGAAATAGCCACTGCCATGTGACGTATATCTACAGAAAAATTGTGATA
GTAAACCTTCATCCGGGAGCTTACAATTGGGTTCAGTAAAATAAAACCTA
ATCATCAGAGCTGTACAAAATAAATTCAAATAATGACGAAACAAGGTATA
GACATCACACATATATCATACATTGCATATCAGTAACTGTATATTTTCGT
AGGCTTCGGCGCAGGAGTGAATGGTGGAGCAAGGGCTCATGCAACTTTTC
ACCTTCGGTCAATGAAAA Coding sequence (CDS) from alignment at Sc0000207:385575..386942+ >transcript:BL97326_cuf1 ID=transcript:BL97326_cuf1|Name=transcript:BL97326_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1728bp|location=Sequence derived from alignment at Sc0000207:385575..386942+ (Branchiostoma lanceolatum)
GGTGGATGCTTCCCGCGATTTTGGTTGTTGCGGAACTCAGCGGCAAGTTT
CGCAACATGCACCTCACAATCGTCCGGGCGCGGGATCAGCAAAAACCACC
GAATAGAGGAACAGACAATGCGGGATTTGCAATTGATGGTTGAACAGCGC
ATGGAAGGCCGGGAAATCGACGTTGCAGAGATATTCACTGACCTACACAA
TCTGATCACAGGTGTTGGGGTTGTCGTGCCACATGTGGCTAATATAGTCG
ATATCTTCTCAAACCACGACATCAAGTTTGAGGCAGATGTACCATTGACG
GCTTTGAACGTAGACTTATTCAGACTACATTGGCCATACATGCTAGGACC
TGTTCCTTTGATATTTGGCTTCGGCGCAGGAGTGAATGGTGGAGCAAGGG
CTCATGCAACTTTTCACCTTCGGTCAATGAAAGGTGGATGCTTCCCGCGA
TTTTGGTTGTTGCGGAACTCAGCGGCAAGTTTCGCAACATGCACCTCACA
ATCGTCCGGGCGCGGGATCAGCAAAAACCACCGAATAGAGGAACAGACAA
TGCGGGATTTGCAATTGATGGTTGAACAGCGCATGGAAGGCCGGGAAATC
GACGTTGCAGAGATATTCACTGACCTACACAATCTGATCACAGGTGTTGG
GGTTGTCGTGCCACATGTGGCTAATATAGTCGATATCTTCTCAAACCACG
ACATCAAGTTTGAGGCAGATGTACCATTGACGGCTTTGAACGTAGACTTA
TTCAGACTACATTGGCCATACATGCTAGGACCTGTTCCTTTGATATTTGG
CTTCGGCGCAGGAGTGAATGGTGGAGCAAGGGCTCATGCAACTTTTCACC
TTCGGTCAATGAAAGGTGGATGCTTCCCGCGATTTTGGTTGTTGCGGAAC
TCAGCGGCAAGTTTCGCAACATGCACCTCACAATCGTCCGGGCGCGGGAT
CAGCAAAAACCACCGAATAGAGGAACAGACAATGCGGGATTTGCAATTGA
TGGTTGAACAGCGCATGGAAGGCCGGGAAATCGACGTTGCAGAGATATTC
ACTGACCTACACAATCTGATCACAGGTGTTGGGGTTGTCGTGCCACATGT
GGCTAATATAGTCGATATCTTCTCAAACCACGACATCAAGTTTGAGGCAG
ATGTACCATTGACGGCTTTGAACGTAGACTTATTCAGACTACATTGGCCA
TACATGCTAGGACCTGTTCCTTTGATATTTGGCTTCGGCGCAGGAGTGAA
TGGTGGAGCAAGGGCTCATGCAACTTTTCACCTTCGGTCAATGAAAGGTG
GATGCTTCCCGCGATTTTGGTTGTTGCGGAACTCAGCGGCAAGTTTCGCA
ACATGCACCTCACAATCGTCCGGGCGCGGGATCAGCAAAAACCACCGAAT
AGAGGAACAGACAATGCGGGATTTGCAATTGATGGTTGAACAGCGCATGG
AAGGCCGGGAAATCGACGTTGCAGAGATATTCACTGACCTACACAATCTG
ATCACAGGTGTTGGGGTTGTCGTGCCACATGTGGCTAATATAGTCGATAT
CTTCTCAAACCACGACATCAAGTTTGAGGCAGATGTACCATTGACGGCTT
TGAACGTAGACTTATTCAGACTACATTGGCCATACATGCTAGGACCTGTT
CCTTTGATATTTGGCTTCGGCGCAGGAGTGAATGGTGGAGCAAGGGCTCA
TGCAACTTTTCACCTTCGGTCAATGAAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000207 | genome | Sc0000207:385575..386942 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97326_cuf1 |
| Biotype | protein_coding |
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