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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97320_cuf4 >transcript:BL97320_cuf4-protein ID=transcript:BL97320_cuf4-protein|Name=transcript:BL97320_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=181bp
PQVLACGETEENFVNVPDIELFHGRRYHICVHANATVLHFELFDQPLEEV
DSCSNGITVDLTPPLPGQVWVNHRDIQFQTSTSEIKVYWEAFRDVEEHGM
SSHHSGIHKYEVAIGTSPNGVDVRDFVDVGVTNMATVHGLRLYSGHTYYA
TIRATDYVGLTVTSVSQGVTVDVTAPVVTDA Run BLAST on NCBI mRNA from alignment at Sc0000207:317595..321280- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97320_cuf4 ID=transcript:BL97320_cuf4|Name=transcript:BL97320_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=3686bp|location=Sequence derived from alignment at Sc0000207:317595..321280- (Branchiostoma lanceolatum)
CCGCAGGTTTTGGCTTGTGGAGAAACTGAGGTAGGGTTTTACTTCGTGAT
TATTGTAATGCAGAAGGTCGATAAAGAAAGCAGAAAATGGCCATACAACA
CAGTATATATCACTAACTACTACCATATTCTTTCCCCTGCCGCCAATCGC
ACTGTTTCGTAAAAATAGACCTGTTGCCAATTACGGTGGTGGACCGTGCT
CCAAAACGAGGCTGCAGTTGATACTCCCTACTTATAAGCCTGTATTATAC
TATAGGTATGCCATCTTCGGTCGCATGTTTGGCCCCTCTAAAGTGAAATA
CTGAGGTACATTTTCATATAACTTATAAAGAATATTTTTGTGGACATTCG
GTCTTGACATTGGCCATGTCTTTATTCTTTTTAAACATTTCCTGACGGGT
GCCTTGACAACATTTAGCGTTAGTGTTTAGCCTCCCATTTGTACTTTAGA
TATTAGAACATCTATGAAAATGATGCCTAGACAATAGGGTCAGTTTATAA
AATGCTTGTTTTACATGTTGTTTTATAATGCGTGCTTTATTGCTTACATA
TATCATCCACTGTCATATCCCAGGAAAACTTTGTCAACGTCCCAGACATA
GAGCTGTTCCACGGACGGAGATACCACATCTGTGTCCACGCGAACGCGAC
AGTTCTGCATTTCGAGCTGTTCGACCAGCCGCTGGAGGAGGTAGATTCCT
GCTCCAACGGCATCACCGTGGATCTTACCCCTCCACTTCCCGGTCAAGTA
TGGGTCAACCACAGAGACATTCAGTTCCAGGTAATATATAGTGTGTCAAT
TATAACGTAGAGTTGATTCACTCCTAAAGCTAACCGACATCTTTAACAAC
TGAAGCTAACCGACATCTTTCACACTGAGGAACGACTGTGGTGTGGAAGC
TGTCGGTTAGCTCGAGGAAAAAATCCACTCTTTACCTTCGCCGAGAAGGT
TATGCAGAGGGTAGCGTTTGTATGTGTGTGTGTAATGTACAGCATAACTC
GAGAAGGCTTGGATGGATTGTCTTGATATTTGGTAGGTGGGTAGGTCTTG
ATGAGACTAGGAAATGATTAGATTTTGGGTCCCCTAGCGGCTTGTTACGG
TACTGCAGCGGAACTTCCTGTTTTGATATCTCATGTTCTGGACATGCTAT
GGAACTGATTTTTAAGTGGTAGATAGCTCTTTGGACAGAGAGTAAGTAGT
ATGGGTTTGGGCCCCCTAGCGGCTTTTTTGGAACTGCAGGAGCAGGTTTT
GCATCTGACTTTGAAAGGGAATAACTCAAGAAGGGCTTGATGGATGGCAA
TGATTTTTGGTAAGTAGATAGCTTGAGTGATGATGAACATGATTAGATAC
TTTTTATGCAAATCAGTATCTAATTTGCATAATTAATGAGGAAAGTTTAT
ACATCCGCCAAATTCCATGATAGGACTCTGAAACATGTGACATATGTAAG
TGAGGAAGAGAGAAATATTAATTGATATGAACTATGCAAATGAAGACCTC
ATTTGCATAATTAATGAGAAAATACTATAACTCAAGATGGCCTTGATGGA
TGGTCATGATATTTGGTATGTAGATAGCTTGTGTGATGCTTAGAATGATT
GGCCGATGATTATGCAAATCAGATTCTAATTTGCATAATTAATGAGGCAA
CTTTAAAAATCTGCTTTGTGCCATGATATGACTATTCAAATTGTAACTGA
GGAAGAGAGGAATGTTGAAGATAGAAAATATGCAAATGTGGGCCTAATTT
GCATACTTAAATGAGAAACTACTATAATTCCATACTGGTAAATGACGGAA
ATTTCATGCATTTAATACTTTTTTTGCGCATCGGGAAGTTATGTGAATGT
GAACATCGTTGAATCAAATTTTGCTTATAAGGGCCTCATTTGCATAATTG
ATGATCAAAATTAGCATAAACTTCTTTGTTAAGCTCATACTTTGTTAAGC
TCATACTTTGGACATGTCATATTTTAAGACAATCAACTGGTATGATTTAT
AATTGATGAGAAACACTCCTAATACGTCAGTCACAATGGTTAAAATTATT
TGGCGAAGGTATGAGGTCGTGGAACTCTAGTTTATACTATATAGTGTGTC
AATTGTTTAATTTGCGTTATCAAGGTAAGACCACCAAGATTATATTGTGT
TGTTGATTGTAGCATGTAAGAAAAGGAATTTGATGATGATACTGACGTCA
AATCGAAGTATTCTTAGGTCCGCATGTTAGATTCAACCAACAGATTTCCA
CGTACCCTCTACGGTCTCTAGTACAAAAATGACAAAACATATATCGTTTA
GTCTTTTTTTATGACAAAATCGTCTTTTGTTTCCCTGTCAGACTTCAACC
TCAGAGATAAAAGTCTACTGGGAAGCGTTTCGTGACGTTGAGGAGCACGG
CATGTCGTCTCATCATAGCGGTATTCACAAGTATGAAGTTGCCATTGGTA
CGTACTCTTTATATAACAGCTTAAGATACCACCTTCATACTCAACTCAAA
ACTTTTATACCATACCATTGACTTTGACATTATTTGAATCCACAATTCAA
GCCTTAATCATAACTTAATTTAAGGGTTTGACACTATTAAGGCCGAACTT
CCTGTACCCGTATTTGTTCTAAAAGAAGACAAATTGATATTTTTTCTTTG
CAGGTACCAGTCCAAATGGTGTCGACGTTCGGGACTTCGTGGATGTTGGC
GTTACGAACATGGCAACGGTTCATGGCCTCCGGTTGTATTCAGGACACAC
CTACTATGCAACTATTAGAGGTAAGGGATTGGTGTACCGTTTTCAATTGG
CATTGGCGTAATGAGTATATGAAAAAAAACAATTTCCAATTTGGAGGAAA
TCAATGAAATTTGTTGTCTGGGTTGGATAATTTCAATGTTGTCGCAGTCT
TTCCCGTGCTCCTGAAGATTTTATAGTTCAATAGTGCCTTAGATGCAAGT
ATTGCTGCTGACCGCGTGACTAAATCTGAACTTTGTATTGTCTTGATAAA
TCAATTGTTGAAATCAATCTGTATCATTGCCGTAGCGACTGACTATGTCG
GCCTGACCGTGACGAGCGTGTCCCAGGGAGTAACAGTTGACGTCACGGCA
CCTGTTGTGACTGATGCNTGACATCACGCCACCTGTGGTGACTGACGCTG
ATATAGATGTAGGAGGCCGATATCTTCTGTCTACGTCATCCGTGTCTGCA
AGCTGGGACAGGGTCTTCATGGATCCTGAGAGCGGTAGGTTTGGACAAGA
AAACATTGAGTCAGAGATATGCCAAACTCGTGCGTGTTGTTTAGATAAAT
TCTGTTTTACCTCCGTCAACAAGGTCATGTTTTGGTAACGTTTGTGACAG
TGTCTGTGGTTGAACTGCATAAAACTCATCAGCTGTGGATGGATCATTAC
ACGATTTGGTATTTGGCTATGTCTTCGCCTCACGTAAGAAATCATAAATT
TTGGGCTCGTACACCTAGCGGCTTTCCTTAGTACTGCAGCATACCTATCG
GTTATTTTATATTTTATTCTGGACATGGTGTATGATTACGATGTCATCAC
CAATCTTTGCCCACAAAGCATATTTCGTATCCGTAGGGTGGGTGGATATA
ACTGTAATATTTGACTCCAAAGGCATCTCGTACTATGAGTGGTGTGTGGG
ATCCCAGCCCGCCCATTGTGACGTCATGGCGCTCAC Coding sequence (CDS) from alignment at Sc0000207:317595..321280- >transcript:BL97320_cuf4 ID=transcript:BL97320_cuf4|Name=transcript:BL97320_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=2730bp|location=Sequence derived from alignment at Sc0000207:317595..321280- (Branchiostoma lanceolatum)
CCGCAGGTTTTGGCTTGTGGAGAAACTGAGGAAAACTTTGTCAACGTCCC
AGACATAGAGCTGTTCCACGGACGGAGATACCACATCTGTGTCCACGCGA
ACGCGACAGTTCTGCATTTCGAGCTGTTCGACCAGCCGCTGGAGGAGGTA
GATTCCTGCTCCAACGGCATCACCGTGGATCTTACCCCTCCACTTCCCGG
TCAAGTATGGGTCAACCACAGAGACATTCAGTTCCAGACTTCAACCTCAG
AGATAAAAGTCTACTGGGAAGCGTTTCGTGACGTTGAGGAGCACGGCATG
TCGTCTCATCATAGCGGTATTCACAAGTATGAAGTTGCCATTGGTACCAG
TCCAAATGGTGTCGACGTTCGGGACTTCGTGGATGTTGGCGTTACGAACA
TGGCAACGGTTCATGGCCTCCGGTTGTATTCAGGACACACCTACTATGCA
ACTATTAGAGCGACTGACTATGTCGGCCTGACCGTGACGAGCGTGTCCCA
GGGAGTAACAGTTGACGTCACGGCACCTGTTGTGACTGATGCNTGACCGC
AGGTTTTGGCTTGTGGAGAAACTGAGGAAAACTTTGTCAACGTCCCAGAC
ATAGAGCTGTTCCACGGACGGAGATACCACATCTGTGTCCACGCGAACGC
GACAGTTCTGCATTTCGAGCTGTTCGACCAGCCGCTGGAGGAGGTAGATT
CCTGCTCCAACGGCATCACCGTGGATCTTACCCCTCCACTTCCCGGTCAA
GTATGGGTCAACCACAGAGACATTCAGTTCCAGACTTCAACCTCAGAGAT
AAAAGTCTACTGGGAAGCGTTTCGTGACGTTGAGGAGCACGGCATGTCGT
CTCATCATAGCGGTATTCACAAGTATGAAGTTGCCATTGGTACCAGTCCA
AATGGTGTCGACGTTCGGGACTTCGTGGATGTTGGCGTTACGAACATGGC
AACGGTTCATGGCCTCCGGTTGTATTCAGGACACACCTACTATGCAACTA
TTAGAGCGACTGACTATGTCGGCCTGACCGTGACGAGCGTGTCCCAGGGA
GTAACAGTTGACGTCACGGCACCTGTTGTGACTGATGCNTGACCGCAGGT
TTTGGCTTGTGGAGAAACTGAGGAAAACTTTGTCAACGTCCCAGACATAG
AGCTGTTCCACGGACGGAGATACCACATCTGTGTCCACGCGAACGCGACA
GTTCTGCATTTCGAGCTGTTCGACCAGCCGCTGGAGGAGGTAGATTCCTG
CTCCAACGGCATCACCGTGGATCTTACCCCTCCACTTCCCGGTCAAGTAT
GGGTCAACCACAGAGACATTCAGTTCCAGACTTCAACCTCAGAGATAAAA
GTCTACTGGGAAGCGTTTCGTGACGTTGAGGAGCACGGCATGTCGTCTCA
TCATAGCGGTATTCACAAGTATGAAGTTGCCATTGGTACCAGTCCAAATG
GTGTCGACGTTCGGGACTTCGTGGATGTTGGCGTTACGAACATGGCAACG
GTTCATGGCCTCCGGTTGTATTCAGGACACACCTACTATGCAACTATTAG
AGCGACTGACTATGTCGGCCTGACCGTGACGAGCGTGTCCCAGGGAGTAA
CAGTTGACGTCACGGCACCTGTTGTGACTGATGCNTGACCGCAGGTTTTG
GCTTGTGGAGAAACTGAGGAAAACTTTGTCAACGTCCCAGACATAGAGCT
GTTCCACGGACGGAGATACCACATCTGTGTCCACGCGAACGCGACAGTTC
TGCATTTCGAGCTGTTCGACCAGCCGCTGGAGGAGGTAGATTCCTGCTCC
AACGGCATCACCGTGGATCTTACCCCTCCACTTCCCGGTCAAGTATGGGT
CAACCACAGAGACATTCAGTTCCAGACTTCAACCTCAGAGATAAAAGTCT
ACTGGGAAGCGTTTCGTGACGTTGAGGAGCACGGCATGTCGTCTCATCAT
AGCGGTATTCACAAGTATGAAGTTGCCATTGGTACCAGTCCAAATGGTGT
CGACGTTCGGGACTTCGTGGATGTTGGCGTTACGAACATGGCAACGGTTC
ATGGCCTCCGGTTGTATTCAGGACACACCTACTATGCAACTATTAGAGCG
ACTGACTATGTCGGCCTGACCGTGACGAGCGTGTCCCAGGGAGTAACAGT
TGACGTCACGGCACCTGTTGTGACTGATGCNTGACCGCAGGTTTTGGCTT
GTGGAGAAACTGAGGAAAACTTTGTCAACGTCCCAGACATAGAGCTGTTC
CACGGACGGAGATACCACATCTGTGTCCACGCGAACGCGACAGTTCTGCA
TTTCGAGCTGTTCGACCAGCCGCTGGAGGAGGTAGATTCCTGCTCCAACG
GCATCACCGTGGATCTTACCCCTCCACTTCCCGGTCAAGTATGGGTCAAC
CACAGAGACATTCAGTTCCAGACTTCAACCTCAGAGATAAAAGTCTACTG
GGAAGCGTTTCGTGACGTTGAGGAGCACGGCATGTCGTCTCATCATAGCG
GTATTCACAAGTATGAAGTTGCCATTGGTACCAGTCCAAATGGTGTCGAC
GTTCGGGACTTCGTGGATGTTGGCGTTACGAACATGGCAACGGTTCATGG
CCTCCGGTTGTATTCAGGACACACCTACTATGCAACTATTAGAGCGACTG
ACTATGTCGGCCTGACCGTGACGAGCGTGTCCCAGGGAGTAACAGTTGAC
GTCACGGCACCTGTTGTGACTGATGCNTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000207 | genome | Sc0000207:317595..321280 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97320_cuf4 |
| Biotype | protein_coding |
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