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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97301_cuf7 >transcript:BL97301_cuf7-protein ID=transcript:BL97301_cuf7-protein|Name=transcript:BL97301_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=253bp
LHEKLQVLQDEKVQLQQSVLVLERDKAVLQAKLAQMKLALREMEMQPAGE
NNKVSDATQTFMLEMQKNLISQFQENIIRLQRDFLEEKRKVVEETKRKQW
CIQCGKEARLYCCWNTSYCDFSCQQAHWPVHMSTCHQQTNQQRPPAAPQP
MDEERSLVPRSLEKTLVPRPFLQQPVIIPAKAEPDSSSQLTGPGGPGGTV
TRLGQVTASRGPPRCVDMQEGEEGGGNSSSPSLLHGSGNNTERRKNDHTY
SQK Run BLAST on NCBI mRNA from alignment at Sc0000126:523395..527065+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97301_cuf7 ID=transcript:BL97301_cuf7|Name=transcript:BL97301_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=3671bp|location=Sequence derived from alignment at Sc0000126:523395..527065+ (Branchiostoma lanceolatum)
CTGCATGAAAAGCTGCAGGTGCTGCAGGAAGAGAAGATTCAGCTGCAGCA
GTCTGTACTAGTGTTATACTGAGACAGTAACTCCTGTATGTGTCTGCAGG
TGGAGCTGTATGAAAAGCTGCAGGTGCTGCAGGATGAGAAGGTACAGCTG
CAGCAGTCAGTACTAGTGTTAGAGAGAGACAAGGCCGTCCTGCAGGCCAA
ACTGGCCCAGATGAAACTGGCCCTCAGGGAGATGGAGATGCAGCCAGCGG
GAGAAAATAACAGTAAGTCTCTTCGTTAAACTGCATAAGACACCAAAATA
CAACATTTTCTTATTATCTGTAATAGGAATAGTATCATTCGAATTTAAAA
GTCTAATACAAATACCCTTCTGCTGCTAGCATTGAATCAACAGAAACCAT
ACTTCCAGCTCTTGATTCTTATCTGATCCATGAAAGTTCATATTTGTTGG
TATAGATGACAGTATTAAACATTATTAAGTCCCATGTTTAGAAACTTTAG
TAGATGAAGATAAGTGTCAATTTTAAAGGCATGTACATGTACATGTATGT
ATATTGTTTTCCGTGCCTGTGCGCACATGTGTGTGCGTGTCAATGTGTGT
GTGTGTTTGTGTGTATGACAGTGTGTGTGCATTCTGCCAGAGGTGGTAAA
GTCTTCTTTCATGCTTTTCTCCTTAGAAGTCAGTGATGCGACCCAGACCT
TTATGCTGGAGATGCAAAAGAACCTGATCTCCCAGTTCCAGGAAAACATC
ATCCGGCTGCAGAGGGACTTCCTGGAGGAGAAACGCAAGGTTGTGGAGGA
GACCAAGAGGAAACAATGGGTAAGGGACGTGGCGACGTGTAGCGCAATGG
TTAGAACTGTCAAACAAGGGGACCCACGTTCCATCCAGAGTTGCCCCCAG
ACATGTCTGGACATGCGCCCTGACGTTGTGCCCTTGGGAAAGGCACTTAA
CACAAATTTTCTCACTTCACTTCGGTGTAAATGAGTACCTAGCTTCGGTT
AGGGACGTCCCTCGGATAGGACGTTAAATGGAGGTCCAGTGTTTGAGGAG
AGTCACACCTTGAGCACGTAAAAGAACCCACCACATCTTTCGAAAAAAAG
TAGGGGCATGCGCCGATGTGAGTGGATCAAAAACATTCCGGTCTAAATGG
GGTAGGGAATTTCCCGAGCAGCCTTCGTAAGCCCTGCTTCTCCTAATGGG
TCAGTGAAGTCATGCTTGTCTTGAGCATTGATGTTTCTGATCTAGGGTGA
AGAGATGCTGCTACAGTAACAATTCAGCCGCCTTTCTTCGTAAATCGATG
GAAAAATCAGGCTCTGACGAATTGATAAAAAAGAAGGGGGACAAAAAACA
TGTCAATGCGAGATGGCAGCCTTCACCTCCTCACCCATATGTTGCGTTCA
ACTCGTCCAGTCCCACAGACAAAAGTAGCGGCTCTGAGGATGTACTGCAA
CACTGCATTATGTATTCTGAATTAGAGCCGAAGGAACACACACGCACATA
AACACACAAGCCAAAAGCTAGACTTCTCTCCCTTGAAATAAATGGGATAA
GTCAGAAGAAGGACAAAAAGGATAAGGAGTTGTTTTTTGATTATACTATT
ATTGATGTACAGCTATGTGAGGTGTTTGCCATTATGTATTCTTTTAATAA
AGTGAACCATTGATCAAAGGACTACACATTTTAAGCTCATGGCCCAGGGG
TACATTTTGTCATGTCTTTAAACTGTCCTTTCATGCTTGCTTTCTTTTTT
TTCCCCATCCTTCCCTCCCCTAGTGTATCCAGTGTGGAAAGGAGGCCAGG
CTCTACTGTTGCTGGAACACCAGTTACTGTGACTTCTCCTGCCAGCAAGC
CCATTGGCCGGTTCATATGAGCACCTGTCACCAGCAGACCAATCAGCAAC
GACCACCAGCTGCACCTCAGCCAATGGATGAAGAGAGGAGTCTTGTTCCC
AGGTCACTAGAGAAGACTCTTGTTCCCAGGCCATTCCTTCAACAGCCCGT
CATCATTCCAGCTAAGGCAGAGCCGGATTCCTCCAGCCAGCTGACCGGTC
CTGGCGGTCCAGGCGGCACGGTTACCAGGTTGGGCCAGGTAACCGCCAGC
CGTGGCCCTCCCAGGTGTGTGGACATGCAGGAAGGGGAGGAGGGTGGTGG
GAACAGTAGCAGCCCCTCACTGTTACATGGGTCAGGCAACAACACAGAAC
GGAGGAAGAACGACCACACTTACTCACAGAAGTAGTAAGATAAGACAAGA
TAATACTTTTATCACTCACAGTATTCATGTTATTGTTGCAAATCTATTTA
TATACAATGTGCGTGTAATGTTTGACATATTTACCTGTGTCTTAATGTGT
ACAATGCTAGTTATTGTGTACTAAATTATAGTAAGTTAACATTGTATTAA
AAAACTGAAAAGACAACATCAGACCATTTTCTAGGTCCTGAAGCATGTGA
AATACGTTTTGATACTTTAGTGATGGCTGTCATCTAATTTTAGATTATAA
CAGTACATGACACTGTGTGTCTATGTATTACACCTTTGTTAGACAGCTGT
CACTTAGTTTTTTGTTTGAGTGACAGCTATCGGTATATTCTTTTTTTAAG
TGACCACNCGGTCCAGGTGGCACGGTTACCAGGTTGGGCCAGGTAACCGC
CAGCCGTGGCCCTCCCAGGTGTGTGGACATGCAGGAAGGGGAGGAGGGTG
GTGGGAACAGTAGCAGCCCCTCACTGTTACATGGGTCAGGCAACAACACA
GAACGGAGGAAGAACGACCACACTTACTCACAGAAGTAGTAAGATAAGAC
AAGATAATACTTTTATCACTCACAGTATTCATGTTATTGTTGCAAATCTA
TTTATATACAATGTGCGTGTAATGTTTGACATATTTACCTGTGTCTTAAT
GTGTACAATGCTAGTTATTGTGTACTAAATTATAGTAAGTTAACATTGTA
TTAAAAAACTGAAAAGACAACATCAGACCATTTTCTAGGTCCTGAAGCAT
GTGAAATACGTTTTGATACTTTAGTGATGGCTGTCATCTAATTTTAGATT
ATAACAGTACATGACACTGTGTGTCTATGTATTACACCTTTGTTAGACAG
CTGTCACTTAGTTTTTTGTTTGAGTGACAGCTATCGGTATATTCTTTTTT
TAAGTGACCACTGTCAAAATATGTTCTTGACAGCTGGCAATATGTGGTTT
GGAGACTTTTCTGTAGTTAAATGACATAGTGAGTTGGTAGCTTTTCTTTC
TTGATATACCTGCTTATATGTATATTGAGAATGAGAAGGGTAACACATTG
TGTATTTGTATATACATTATAGTTCTTGTTATGTTATTTATAGGTAAAGT
AACTTATATATGTTGTAGAAACTTATTTTTGTTATATTTTTAATACATAT
GTATCAGTATAAGAAAGATAACAGTTTTGTTATTATATATGTACAATTAT
TTTTCGTTATTGATAATAACTTAGAATTTGCCAAGTTTTCTATATATATA
TATCAGGACTTTTTTCATAACTTACAGAAGTTGGAACATCTGGATAACAA
ACTAATACAGAAAGCTCTTGTTGGTTGCTAGTTTATGACAAGCTTCATAA
ATTGTAAAACACAAGTTCGGTCAATAAATTTATGTCACCTTGGCAACCCA
ATGATGTGTCCGACTTTTAAC Coding sequence (CDS) from alignment at Sc0000126:523395..527065+ >transcript:BL97301_cuf7 ID=transcript:BL97301_cuf7|Name=transcript:BL97301_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=3048bp|location=Sequence derived from alignment at Sc0000126:523395..527065+ (Branchiostoma lanceolatum)
CTGCATGAAAAGCTGCAGGTGCTGCAGGATGAGAAGGTACAGCTGCAGCA
GTCAGTACTAGTGTTAGAGAGAGACAAGGCCGTCCTGCAGGCCAAACTGG
CCCAGATGAAACTGGCCCTCAGGGAGATGGAGATGCAGCCAGCGGGAGAA
AATAACAAAGTCAGTGATGCGACCCAGACCTTTATGCTGGAGATGCAAAA
GAACCTGATCTCCCAGTTCCAGGAAAACATCATCCGGCTGCAGAGGGACT
TCCTGGAGGAGAAACGCAAGGTTGTGGAGGAGACCAAGAGGAAACAATGG
TGTATCCAGTGTGGAAAGGAGGCCAGGCTCTACTGTTGCTGGAACACCAG
TTACTGTGACTTCTCCTGCCAGCAAGCCCATTGGCCGGTTCATATGAGCA
CCTGTCACCAGCAGACCAATCAGCAACGACCACCAGCTGCACCTCAGCCA
ATGGATGAAGAGAGGAGTCTTGTTCCCAGGTCACTAGAGAAGACTCTTGT
TCCCAGGCCATTCCTTCAACAGCCCGTCATCATTCCAGCTAAGGCAGAGC
CGGATTCCTCCAGCCAGCTGACCGGTCCTGGCGGTCCAGGCGGCACGGTT
ACCAGGTTGGGCCAGGTAACCGCCAGCCGTGGCCCTCCCAGGTGTGTGGA
CATGCAGGAAGGGGAGGAGGGTGGTGGGAACAGTAGCAGCCCCTCACTGT
TACATGGGTCAGGCAACAACACAGAACGGAGGAAGAACGACCACACTTAC
TCACAGAAGTAGCTGCATGAAAAGCTGCAGGTGCTGCAGGATGAGAAGGT
ACAGCTGCAGCAGTCAGTACTAGTGTTAGAGAGAGACAAGGCCGTCCTGC
AGGCCAAACTGGCCCAGATGAAACTGGCCCTCAGGGAGATGGAGATGCAG
CCAGCGGGAGAAAATAACAAAGTCAGTGATGCGACCCAGACCTTTATGCT
GGAGATGCAAAAGAACCTGATCTCCCAGTTCCAGGAAAACATCATCCGGC
TGCAGAGGGACTTCCTGGAGGAGAAACGCAAGGTTGTGGAGGAGACCAAG
AGGAAACAATGGTGTATCCAGTGTGGAAAGGAGGCCAGGCTCTACTGTTG
CTGGAACACCAGTTACTGTGACTTCTCCTGCCAGCAAGCCCATTGGCCGG
TTCATATGAGCACCTGTCACCAGCAGACCAATCAGCAACGACCACCAGCT
GCACCTCAGCCAATGGATGAAGAGAGGAGTCTTGTTCCCAGGTCACTAGA
GAAGACTCTTGTTCCCAGGCCATTCCTTCAACAGCCCGTCATCATTCCAG
CTAAGGCAGAGCCGGATTCCTCCAGCCAGCTGACCGGTCCTGGCGGTCCA
GGCGGCACGGTTACCAGGTTGGGCCAGGTAACCGCCAGCCGTGGCCCTCC
CAGGTGTGTGGACATGCAGGAAGGGGAGGAGGGTGGTGGGAACAGTAGCA
GCCCCTCACTGTTACATGGGTCAGGCAACAACACAGAACGGAGGAAGAAC
GACCACACTTACTCACAGAAGTAGCTGCATGAAAAGCTGCAGGTGCTGCA
GGATGAGAAGGTACAGCTGCAGCAGTCAGTACTAGTGTTAGAGAGAGACA
AGGCCGTCCTGCAGGCCAAACTGGCCCAGATGAAACTGGCCCTCAGGGAG
ATGGAGATGCAGCCAGCGGGAGAAAATAACAAAGTCAGTGATGCGACCCA
GACCTTTATGCTGGAGATGCAAAAGAACCTGATCTCCCAGTTCCAGGAAA
ACATCATCCGGCTGCAGAGGGACTTCCTGGAGGAGAAACGCAAGGTTGTG
GAGGAGACCAAGAGGAAACAATGGTGTATCCAGTGTGGAAAGGAGGCCAG
GCTCTACTGTTGCTGGAACACCAGTTACTGTGACTTCTCCTGCCAGCAAG
CCCATTGGCCGGTTCATATGAGCACCTGTCACCAGCAGACCAATCAGCAA
CGACCACCAGCTGCACCTCAGCCAATGGATGAAGAGAGGAGTCTTGTTCC
CAGGTCACTAGAGAAGACTCTTGTTCCCAGGCCATTCCTTCAACAGCCCG
TCATCATTCCAGCTAAGGCAGAGCCGGATTCCTCCAGCCAGCTGACCGGT
CCTGGCGGTCCAGGCGGCACGGTTACCAGGTTGGGCCAGGTAACCGCCAG
CCGTGGCCCTCCCAGGTGTGTGGACATGCAGGAAGGGGAGGAGGGTGGTG
GGAACAGTAGCAGCCCCTCACTGTTACATGGGTCAGGCAACAACACAGAA
CGGAGGAAGAACGACCACACTTACTCACAGAAGTAGCTGCATGAAAAGCT
GCAGGTGCTGCAGGATGAGAAGGTACAGCTGCAGCAGTCAGTACTAGTGT
TAGAGAGAGACAAGGCCGTCCTGCAGGCCAAACTGGCCCAGATGAAACTG
GCCCTCAGGGAGATGGAGATGCAGCCAGCGGGAGAAAATAACAAAGTCAG
TGATGCGACCCAGACCTTTATGCTGGAGATGCAAAAGAACCTGATCTCCC
AGTTCCAGGAAAACATCATCCGGCTGCAGAGGGACTTCCTGGAGGAGAAA
CGCAAGGTTGTGGAGGAGACCAAGAGGAAACAATGGTGTATCCAGTGTGG
AAAGGAGGCCAGGCTCTACTGTTGCTGGAACACCAGTTACTGTGACTTCT
CCTGCCAGCAAGCCCATTGGCCGGTTCATATGAGCACCTGTCACCAGCAG
ACCAATCAGCAACGACCACCAGCTGCACCTCAGCCAATGGATGAAGAGAG
GAGTCTTGTTCCCAGGTCACTAGAGAAGACTCTTGTTCCCAGGCCATTCC
TTCAACAGCCCGTCATCATTCCAGCTAAGGCAGAGCCGGATTCCTCCAGC
CAGCTGACCGGTCCTGGCGGTCCAGGCGGCACGGTTACCAGGTTGGGCCA
GGTAACCGCCAGCCGTGGCCCTCCCAGGTGTGTGGACATGCAGGAAGGGG
AGGAGGGTGGTGGGAACAGTAGCAGCCCCTCACTGTTACATGGGTCAGGC
AACAACACAGAACGGAGGAAGAACGACCACACTTACTCACAGAAGTAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000126 | genome | Sc0000126:523395..527065 + |
Properties
| Property Name | Value |
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| Transcript id | BL97301_cuf7 |
| Biotype | protein_coding |
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