transcript:BL97296_cuf0 (mRNA) - B. lanceolatum

Overview
Nametranscript:BL97296_cuf0
Unique Nametranscript:BL97296_cuf0
TypemRNA
OrganismBranchiostoma lanceolatum (Amphioxus)



Sequence
The following sequences are available for this feature:

protein sequence of transcript:BL97296_cuf0

>transcript:BL97296_cuf0-protein ID=transcript:BL97296_cuf0-protein|Name=transcript:BL97296_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=429bp
YYLQTSRDVKRLEATARSPVFSHVSTTLSGLSTLRVMKRQDSFLEQFHHC
LDYHSSGWFLFISCARWFQIRLDWLCAAFVATVAFGAILASDSVSRGLVG
LSLTQAIMLMGVFQWVVKQSAEVENQMTSVERVVSYTHLEKEPPLILHPR
PPSNWPSQGRIQLDNVTMRYGSKLTPTLNNVSVIISPGEKIGIVGRTGAG
KTSLIMSLFRLVESDGTVMIDGYITTEVGLNDLRSRMTVIPQDPVLFKGS
LRQNLDPFSKHSDTELWAALEEVQLKQVVEKLPEGLETGLIEFGANFSLG
QRQLLCLGRAILKKSRIVVLDEATANVDPLTDGLILRMIEKKFADCTVLT
IAHRLHSIIDCNKVMVLQDGGIVEFDEPSVLLFREGSVFRNMVGDSAQFI
LRMRQVLQERRRSKTPGPGHKLRNNTMTP
Run BLAST on NCBI

mRNA from alignment at Sc0000149:325438..330647-

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>transcript:BL97296_cuf0 ID=transcript:BL97296_cuf0|Name=transcript:BL97296_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=5210bp|location=Sequence derived from alignment at Sc0000149:325438..330647- (Branchiostoma lanceolatum)
ATTACTACCTGCAGACATCACGAGATGTCAAGCGCCTCGAGGCAACAGGT GAGTCTGCTTTACACATCTGAGACATGGCGTCAAGTCAACGTTTTATGAC ACTGCTTCCAGGATTCAAGCAAACATTACTTTTTGGCAAGCTTCACATAT GAGTCAACAACAAAAAAGTCAGTCCCATATTTCTCACATGATATTTCAAC ATATAATCTCACAAGGGGATAATGCCAAGATAACACATTTATCAAATTTC TTGTAAGTCTCATAGATCTTAAATGATATCCTGATCTACATATACATGTA GGTATTGGTCACATGCACTGGATGTAATATTATGACACTTTAAAGTTGTA GACATACTGGAAAGTATGGTTGCAGCAGAAAATAGTTTGAAGGCCTTGTC CAACTTGCAATTGTTGCTTTCTAATATATCCCCTTAAAAAAAGAAAATAA ACCATGATCTTTATTTGATCTCTTTCAGCAAGGAGCCCAGTTTTCTCGCA TGTATCCACCACCCTCAGTGGCCTGTCTACACTACGGGTCATGAAGAGGC AAGACTCTTTCTTGGAACAGTTTCATCACTGCCTAGACTACCACAGGTAC GTGTAGTGGTGCGGATCGGTCCGGCCGGACCGGTTCCGGACTTGTAAAAC GTTTAGGTTCAAGTCCAAAAAAACCTAAACGTCTGGAAACAAGTCCGGAC TTGAAAAAAAATTCTCTCACTCATACACTCCTTTTTGTTTTAAACCATCT TAAACCTTCCTTAAATCGTGAAATTTGCACTAGAAAAATATTAAAACATT GCTGTTTTTGTGTTTATAACTGAACTTTTGTGTTAATTACTGACTGTATA TAATTCCGTATATATAGTTTTCAAATTACATGTAAAATATCTGCCAATAT GCAATTTTACATGTAACACGAAAAAATATTCCAAAATTATTGTTCAGGTC CGGACTTTCAAGTCCGGACCTGAACCTAAACCTCTGGACTCGAGTCCGAA CCTAAACCTAAACTCGGGTTTAGATCCACACCACTAGGTACGTGTATAAT CAAGTAGTGTAGAAGTCAGTAAATACATAAAGACAATTTACATAACAATT TAGAATTCACATAACTTTCTTATAACCTCCATGAAATGTGTCATGGAGGT TATATTTTCAGCAGTGTTTGTCTGTCTGTAAACAAGATAACTCAAGAACA GCTAATGAAATGGATTGGTTTCATACTTGGTGTGTTGGTAGGGTGTGACA AAAACTGGAAACCATTTTATTTTGATCCCCTTAGCAACTTTCCTTGGTAC TGCAGCAGAACTCCTGGGTTTGACATCTTGTGTTCTGGACGTGCTATGGT CACAATTTTTATAGTATAAAGCTGTTTACTGTATGTGTGAAAATCTGAAA ATTTGGTGGCTATAAAGTAACTGAGGAGTCAGTGAGGACTGATGACTGTA ACTGCATGTAAGTAATGACCTTGTTATATTAATGTCAGGAGGTGGTGATA ACAAGGAACTGATATCGCTCTGTTCTGCATTTTCTCCCAGTTCAGGGTGG TTCCTCTTCATCTCCTGTGCACGGTGGTTCCAGATCCGACTGGACTGGCT CTGTGCAGCCTTTGTTGCCACAGTGGCTTTTGGTGCAATTTTGGCTTCAG ACAGTAAGTTGGTCAAGATCGTCACCAATGTAAACAATCTGTGCCATATT TGCTGTCACAATGGCTTGTGAAATGCTAATTTCAAAGTCTAAATTTGGAC CCCATGAACACAAAATATTTCACAAAGTATGAACTAAAAAATGCATGTCC CTAAACTATTCAATATGCAATAGACTGTATACTGTCAAGGTTAGATCTCC CTCCTTAAATACATTCATGAGATCTAATGGGATTGACATGAATATATTAA GTAGTTTTTGAACATTAGAAAGTCTGAGCCAGCTTTTGTTTCCACCTGCA GGTGTGAGTAGAGGTCTGGTGGGCCTGTCCCTCACCCAGGCCATCATGCT GATGGGGGTGTTCCAGTGGGTCGTCAAGCAGAGTGCAGAGGTGGAAAACC AGGTGAGAGCATTTAGCCATTAAATGCATGGTTCTACAACAATCTCAGCT GGTGCTAATAACACTTGCCAAAGGAACTTCAGCACCAAGGGCAAAGACCG ATATCTGACTCTGTACTGGAGGAAATGGTTTCTTTCGCATTTGTTCCTAG AATATCTTAAATATCATGTTACTTAATTGTGATATTTGTGGGTAGGGCTT GGTCCAGCGAGCAAGTAAGCATACAAGCAAGGATTGGTAGAGATCTGAAT CTTGAAAGGATTCTTCACCAGTTACATTATGTACATGGGTTCCTTTACGC TGCAAACTACAGTATAAGCATATCAATGATACTGCAAAGATGAACTGTGG GGGTTACAATTTGTGAGGAAAGTAGCACACTTCTGTAGAGGTTTAAACTT TCATGGGTGCTGTCTACTCTACTTTATTGTATTGATTCATCTGAGCTTGT TTACACAGNTATTGTATTGTGTTGATTCATTCAACATGTTTGCACAGATG ACATCAGTGGAACGGGTGGTGTCCTACACCCATCTTGAGAAGGAACCTCC CCTAATCCTTCACCCTCGTCCACCCTCTAACTGGCCCAGCCAAGGCAGGA TTCAGCTGGATAATGTCACCATGCGATATGGCAGCAAATTGACACCCACC CTGAACAATGTGTCTGTCATCATTTCACCAGGGGAAAAGGTGAGGTGTAA GGAAAATGGGAGTAAGCTAAAACTGATGTGAAAAGATGATGGCACAGCAA ATTAGATGACAAACTGTACTTCTGACAGTTGTAAGAAGAGTTTGATTCAA AGCTGTATATGTGGCATGGCTGTAGAGAATGAAGTTTCAACTTGCAATTA CTGAGCCTGTCTGTGAAGCTCTACCTGTTTAGAGCCTTTAGGATCTATAG AAAGTCTTTAAGTGCCTCTATCTATTTCTACATTCGTCAATTGACTTTCT TTTTTTTGCCCCACATTGGACAACAATAAAGTAAAGCTTACAGTAAAGCA GTAATCCCTAACTGAGGTGAATCACGATGCTGTTTCAAGCGGTAGAGCAA TGTGGTTTTGCTATGGATCACGTTTTCAAGCAAGCACACTCTAAGTCTTT CCATACTCCTTTCAGAAGTGTGTTGGGTTCTTTTACGTGCATAGGTTTGA TACTTGAGGCTAATACAATATGGCTACCTCACTAGTGAGACTTTTATAAG TACACTCATGGCTACCACACATTTCCCCATTTTTCTTGTCATGTTGACCA TAGCCCAAGTGTAACGAAATGTTTGTTTTTTTTGGTAAAAATTAATGTCA TCCACAAAATCTACATACTGTAGCCAAAAACCCAAGCAAAAAGTTTGGTT AAGTGTGATAAAACTGTGCTACACTAATTTACTTTCTTATGACTAACTGC CACAATTTCTCTCAATATGCCAGATTGGTATTGTCGGTCGCACAGGGGCA GGAAAGACATCTCTGATCATGTCCCTGTTCCGTTTGGTGGAGTCTGACGG CACTGTAATGATTGACGGCTACATAACAACAGAGGTAGGACTGAATGACC TTCGTAGCCGCATGACAGTCATTCCACAGGTCAGTGGTACAACATGTACT TCTGTATAAGCCCATATGTTCGATTTTTTGGGGATAAAATTCTCTTGAAA ATAGCTCTGCACTGAGTAGAAGACAATAATGGCATTTATTCATTATGATG AAATTTGAATCACTTCTGGGGTTACATATGAATAGAATGATTCTAACCTC CATTGTTTTTCCTCATGTGTAAATTTGTGTAGGATCCTGTCCTTTTTAAA GGCAGCCTACGACAGAACTTGGACCCTTTCTCCAAACACTCAGACACAGA GCTGTGGGCAGCCCTGGAGGAGGTAAACATTCTTTTAGTGTACAAAACAA ATGCATACTAGTAGTTTACAACACAGGTCACAACAACAACTACCCTTTTT CCTGCTATGGGCTCAATACACAGGCACAGTACAAGTATATATACACAGGA ATGACTACAAAGGTCAGTTATCCTAGTACTAATATGTGTTTGCTTTGATA AAATCACATTATGCTTTGCACAGCACATCATTGCAGCTGGACATTTTTCT ATTATTTCTATATTATAGGTCCAGCTGAAACAAGTGGTGGAGAAACTGCC TGAGGGACTGGAGACTGGGCTTATTGAATTTGGTGCTAACTTCAGTTTGG GGCAGAGACAACTGCTATGTCTGGGAAGGGCTATCCTGAAGAAGAGTCGC ATTGTTGTGCTGGATGAGGCCACTGCTAATGTGGACCCTCTGTGAGTTTG TACATCATTCAGACAACACATTAACACAAGTTGGCTCTTGTTGGATAGAT ATTTCTGGAATCAAACTGTTGGATTTTGCTGAACTGATTAAGATGTATCT CATCTAGTTGCAACAAGGAGAATTTAAGTGCCAGAGGACTGAAACATACC AGGGCATCACCCATCTAAACGAAAATAGACCAGTGAATTCTTAACCTTGT TTTTATGTTTGCAGGACAGATGGTCTGATCCTGCGGATGATTGAGAAGAA GTTTGCAGACTGCACAGTCCTGACCATTGCTCACAGGCTCCATTCCATCA TTGACTGCAACAAAGTCATGGTAGGTCTTCCTTGGATACAACATACATGT ACTGCAGTTTGACATAGCATTTGGACCACAATCCCTCCTCCTGATCCAAC CTTTCAACAATAAAAAGTTAACTTCAGCATTGGTGTATAATGGTTTTAAA ATCTTTGGTTTATCAAAAACATAGAGAGGGCCATCTTAACAGTGAAACGT TTTTTTTTCAGATTGACATACATTGTACCGGTACCATTGTGGTCTAATGG ACATGTTGATATTGAAATAACCATACCCCTTGATTCAAAAGATAAAGATG TCATAACTTTCAAATTTGTCATCAGTCCTATCATTTTTATGTTTATATAT CAAAACTTTTACTACAGGTTTTGCAAGATGGCGGAATTGTTGAGTTTGAC GAGCCATCTGTGCTGCTTTTTCGAGAGGGCAGCGTGTTCAGAAACATGGT GGGAGATTCTGCCCAGTTCATTCTGAGGATGCGCCAAGTTCTCCAGGAGA GGCGCCGATCAAAGACGCCTGGTCCAGGTCACAAACTCCGTAACAACACC ATGACACCTG

Coding sequence (CDS) from alignment at Sc0000149:325438..330647-

>transcript:BL97296_cuf0 ID=transcript:BL97296_cuf0|Name=transcript:BL97296_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=12870bp|location=Sequence derived from alignment at Sc0000149:325438..330647- (Branchiostoma lanceolatum)
TACTACCTGCAGACATCACGAGATGTCAAGCGCCTCGAGGCAACAGCAAG
GAGCCCAGTTTTCTCGCATGTATCCACCACCCTCAGTGGCCTGTCTACAC
TACGGGTCATGAAGAGGCAAGACTCTTTCTTGGAACAGTTTCATCACTGC
CTAGACTACCACAGTTCAGGGTGGTTCCTCTTCATCTCCTGTGCACGGTG
GTTCCAGATCCGACTGGACTGGCTCTGTGCAGCCTTTGTTGCCACAGTGG
CTTTTGGTGCAATTTTGGCTTCAGACAGTGTGAGTAGAGGTCTGGTGGGC
CTGTCCCTCACCCAGGCCATCATGCTGATGGGGGTGTTCCAGTGGGTCGT
CAAGCAGAGTGCAGAGGTGGAAAACCAGATGACATCAGTGGAACGGGTGG
TGTCCTACACCCATCTTGAGAAGGAACCTCCCCTAATCCTTCACCCTCGT
CCACCCTCTAACTGGCCCAGCCAAGGCAGGATTCAGCTGGATAATGTCAC
CATGCGATATGGCAGCAAATTGACACCCACCCTGAACAATGTGTCTGTCA
TCATTTCACCAGGGGAAAAGATTGGTATTGTCGGTCGCACAGGGGCAGGA
AAGACATCTCTGATCATGTCCCTGTTCCGTTTGGTGGAGTCTGACGGCAC
TGTAATGATTGACGGCTACATAACAACAGAGGTAGGACTGAATGACCTTC
GTAGCCGCATGACAGTCATTCCACAGGATCCTGTCCTTTTTAAAGGCAGC
CTACGACAGAACTTGGACCCTTTCTCCAAACACTCAGACACAGAGCTGTG
GGCAGCCCTGGAGGAGGTCCAGCTGAAACAAGTGGTGGAGAAACTGCCTG
AGGGACTGGAGACTGGGCTTATTGAATTTGGTGCTAACTTCAGTTTGGGG
CAGAGACAACTGCTATGTCTGGGAAGGGCTATCCTGAAGAAGAGTCGCAT
TGTTGTGCTGGATGAGGCCACTGCTAATGTGGACCCTCTGACAGATGGTC
TGATCCTGCGGATGATTGAGAAGAAGTTTGCAGACTGCACAGTCCTGACC
ATTGCTCACAGGCTCCATTCCATCATTGACTGCAACAAAGTCATGGTTTT
GCAAGATGGCGGAATTGTTGAGTTTGACGAGCCATCTGTGCTGCTTTTTC
GAGAGGGCAGCGTGTTCAGAAACATGGTGGGAGATTCTGCCCAGTTCATT
CTGAGGATGCGCCAAGTTCTCCAGGAGAGGCGCCGATCAAAGACGCCTGG
TCCAGGTCACAAACTCCGTAACAACACCATGACACCTTACTACCTGCAGA
CATCACGAGATGTCAAGCGCCTCGAGGCAACAGCAAGGAGCCCAGTTTTC
TCGCATGTATCCACCACCCTCAGTGGCCTGTCTACACTACGGGTCATGAA
GAGGCAAGACTCTTTCTTGGAACAGTTTCATCACTGCCTAGACTACCACA
GTTCAGGGTGGTTCCTCTTCATCTCCTGTGCACGGTGGTTCCAGATCCGA
CTGGACTGGCTCTGTGCAGCCTTTGTTGCCACAGTGGCTTTTGGTGCAAT
TTTGGCTTCAGACAGTGTGAGTAGAGGTCTGGTGGGCCTGTCCCTCACCC
AGGCCATCATGCTGATGGGGGTGTTCCAGTGGGTCGTCAAGCAGAGTGCA
GAGGTGGAAAACCAGATGACATCAGTGGAACGGGTGGTGTCCTACACCCA
TCTTGAGAAGGAACCTCCCCTAATCCTTCACCCTCGTCCACCCTCTAACT
GGCCCAGCCAAGGCAGGATTCAGCTGGATAATGTCACCATGCGATATGGC
AGCAAATTGACACCCACCCTGAACAATGTGTCTGTCATCATTTCACCAGG
GGAAAAGATTGGTATTGTCGGTCGCACAGGGGCAGGAAAGACATCTCTGA
TCATGTCCCTGTTCCGTTTGGTGGAGTCTGACGGCACTGTAATGATTGAC
GGCTACATAACAACAGAGGTAGGACTGAATGACCTTCGTAGCCGCATGAC
AGTCATTCCACAGGATCCTGTCCTTTTTAAAGGCAGCCTACGACAGAACT
TGGACCCTTTCTCCAAACACTCAGACACAGAGCTGTGGGCAGCCCTGGAG
GAGGTCCAGCTGAAACAAGTGGTGGAGAAACTGCCTGAGGGACTGGAGAC
TGGGCTTATTGAATTTGGTGCTAACTTCAGTTTGGGGCAGAGACAACTGC
TATGTCTGGGAAGGGCTATCCTGAAGAAGAGTCGCATTGTTGTGCTGGAT
GAGGCCACTGCTAATGTGGACCCTCTGACAGATGGTCTGATCCTGCGGAT
GATTGAGAAGAAGTTTGCAGACTGCACAGTCCTGACCATTGCTCACAGGC
TCCATTCCATCATTGACTGCAACAAAGTCATGGTTTTGCAAGATGGCGGA
ATTGTTGAGTTTGACGAGCCATCTGTGCTGCTTTTTCGAGAGGGCAGCGT
GTTCAGAAACATGGTGGGAGATTCTGCCCAGTTCATTCTGAGGATGCGCC
AAGTTCTCCAGGAGAGGCGCCGATCAAAGACGCCTGGTCCAGGTCACAAA
CTCCGTAACAACACCATGACACCTTACTACCTGCAGACATCACGAGATGT
CAAGCGCCTCGAGGCAACAGCAAGGAGCCCAGTTTTCTCGCATGTATCCA
CCACCCTCAGTGGCCTGTCTACACTACGGGTCATGAAGAGGCAAGACTCT
TTCTTGGAACAGTTTCATCACTGCCTAGACTACCACAGTTCAGGGTGGTT
CCTCTTCATCTCCTGTGCACGGTGGTTCCAGATCCGACTGGACTGGCTCT
GTGCAGCCTTTGTTGCCACAGTGGCTTTTGGTGCAATTTTGGCTTCAGAC
AGTGTGAGTAGAGGTCTGGTGGGCCTGTCCCTCACCCAGGCCATCATGCT
GATGGGGGTGTTCCAGTGGGTCGTCAAGCAGAGTGCAGAGGTGGAAAACC
AGATGACATCAGTGGAACGGGTGGTGTCCTACACCCATCTTGAGAAGGAA
CCTCCCCTAATCCTTCACCCTCGTCCACCCTCTAACTGGCCCAGCCAAGG
CAGGATTCAGCTGGATAATGTCACCATGCGATATGGCAGCAAATTGACAC
CCACCCTGAACAATGTGTCTGTCATCATTTCACCAGGGGAAAAGATTGGT
ATTGTCGGTCGCACAGGGGCAGGAAAGACATCTCTGATCATGTCCCTGTT
CCGTTTGGTGGAGTCTGACGGCACTGTAATGATTGACGGCTACATAACAA
CAGAGGTAGGACTGAATGACCTTCGTAGCCGCATGACAGTCATTCCACAG
GATCCTGTCCTTTTTAAAGGCAGCCTACGACAGAACTTGGACCCTTTCTC
CAAACACTCAGACACAGAGCTGTGGGCAGCCCTGGAGGAGGTCCAGCTGA
AACAAGTGGTGGAGAAACTGCCTGAGGGACTGGAGACTGGGCTTATTGAA
TTTGGTGCTAACTTCAGTTTGGGGCAGAGACAACTGCTATGTCTGGGAAG
GGCTATCCTGAAGAAGAGTCGCATTGTTGTGCTGGATGAGGCCACTGCTA
ATGTGGACCCTCTGACAGATGGTCTGATCCTGCGGATGATTGAGAAGAAG
TTTGCAGACTGCACAGTCCTGACCATTGCTCACAGGCTCCATTCCATCAT
TGACTGCAACAAAGTCATGGTTTTGCAAGATGGCGGAATTGTTGAGTTTG
ACGAGCCATCTGTGCTGCTTTTTCGAGAGGGCAGCGTGTTCAGAAACATG
GTGGGAGATTCTGCCCAGTTCATTCTGAGGATGCGCCAAGTTCTCCAGGA
GAGGCGCCGATCAAAGACGCCTGGTCCAGGTCACAAACTCCGTAACAACA
CCATGACACCTTACTACCTGCAGACATCACGAGATGTCAAGCGCCTCGAG
GCAACAGCAAGGAGCCCAGTTTTCTCGCATGTATCCACCACCCTCAGTGG
CCTGTCTACACTACGGGTCATGAAGAGGCAAGACTCTTTCTTGGAACAGT
TTCATCACTGCCTAGACTACCACAGTTCAGGGTGGTTCCTCTTCATCTCC
TGTGCACGGTGGTTCCAGATCCGACTGGACTGGCTCTGTGCAGCCTTTGT
TGCCACAGTGGCTTTTGGTGCAATTTTGGCTTCAGACAGTGTGAGTAGAG
GTCTGGTGGGCCTGTCCCTCACCCAGGCCATCATGCTGATGGGGGTGTTC
CAGTGGGTCGTCAAGCAGAGTGCAGAGGTGGAAAACCAGATGACATCAGT
GGAACGGGTGGTGTCCTACACCCATCTTGAGAAGGAACCTCCCCTAATCC
TTCACCCTCGTCCACCCTCTAACTGGCCCAGCCAAGGCAGGATTCAGCTG
GATAATGTCACCATGCGATATGGCAGCAAATTGACACCCACCCTGAACAA
TGTGTCTGTCATCATTTCACCAGGGGAAAAGATTGGTATTGTCGGTCGCA
CAGGGGCAGGAAAGACATCTCTGATCATGTCCCTGTTCCGTTTGGTGGAG
TCTGACGGCACTGTAATGATTGACGGCTACATAACAACAGAGGTAGGACT
GAATGACCTTCGTAGCCGCATGACAGTCATTCCACAGGATCCTGTCCTTT
TTAAAGGCAGCCTACGACAGAACTTGGACCCTTTCTCCAAACACTCAGAC
ACAGAGCTGTGGGCAGCCCTGGAGGAGGTCCAGCTGAAACAAGTGGTGGA
GAAACTGCCTGAGGGACTGGAGACTGGGCTTATTGAATTTGGTGCTAACT
TCAGTTTGGGGCAGAGACAACTGCTATGTCTGGGAAGGGCTATCCTGAAG
AAGAGTCGCATTGTTGTGCTGGATGAGGCCACTGCTAATGTGGACCCTCT
GACAGATGGTCTGATCCTGCGGATGATTGAGAAGAAGTTTGCAGACTGCA
CAGTCCTGACCATTGCTCACAGGCTCCATTCCATCATTGACTGCAACAAA
GTCATGGTTTTGCAAGATGGCGGAATTGTTGAGTTTGACGAGCCATCTGT
GCTGCTTTTTCGAGAGGGCAGCGTGTTCAGAAACATGGTGGGAGATTCTG
CCCAGTTCATTCTGAGGATGCGCCAAGTTCTCCAGGAGAGGCGCCGATCA
AAGACGCCTGGTCCAGGTCACAAACTCCGTAACAACACCATGACACCTTA
CTACCTGCAGACATCACGAGATGTCAAGCGCCTCGAGGCAACAGCAAGGA
GCCCAGTTTTCTCGCATGTATCCACCACCCTCAGTGGCCTGTCTACACTA
CGGGTCATGAAGAGGCAAGACTCTTTCTTGGAACAGTTTCATCACTGCCT
AGACTACCACAGTTCAGGGTGGTTCCTCTTCATCTCCTGTGCACGGTGGT
TCCAGATCCGACTGGACTGGCTCTGTGCAGCCTTTGTTGCCACAGTGGCT
TTTGGTGCAATTTTGGCTTCAGACAGTGTGAGTAGAGGTCTGGTGGGCCT
GTCCCTCACCCAGGCCATCATGCTGATGGGGGTGTTCCAGTGGGTCGTCA
AGCAGAGTGCAGAGGTGGAAAACCAGATGACATCAGTGGAACGGGTGGTG
TCCTACACCCATCTTGAGAAGGAACCTCCCCTAATCCTTCACCCTCGTCC
ACCCTCTAACTGGCCCAGCCAAGGCAGGATTCAGCTGGATAATGTCACCA
TGCGATATGGCAGCAAATTGACACCCACCCTGAACAATGTGTCTGTCATC
ATTTCACCAGGGGAAAAGATTGGTATTGTCGGTCGCACAGGGGCAGGAAA
GACATCTCTGATCATGTCCCTGTTCCGTTTGGTGGAGTCTGACGGCACTG
TAATGATTGACGGCTACATAACAACAGAGGTAGGACTGAATGACCTTCGT
AGCCGCATGACAGTCATTCCACAGGATCCTGTCCTTTTTAAAGGCAGCCT
ACGACAGAACTTGGACCCTTTCTCCAAACACTCAGACACAGAGCTGTGGG
CAGCCCTGGAGGAGGTCCAGCTGAAACAAGTGGTGGAGAAACTGCCTGAG
GGACTGGAGACTGGGCTTATTGAATTTGGTGCTAACTTCAGTTTGGGGCA
GAGACAACTGCTATGTCTGGGAAGGGCTATCCTGAAGAAGAGTCGCATTG
TTGTGCTGGATGAGGCCACTGCTAATGTGGACCCTCTGACAGATGGTCTG
ATCCTGCGGATGATTGAGAAGAAGTTTGCAGACTGCACAGTCCTGACCAT
TGCTCACAGGCTCCATTCCATCATTGACTGCAACAAAGTCATGGTTTTGC
AAGATGGCGGAATTGTTGAGTTTGACGAGCCATCTGTGCTGCTTTTTCGA
GAGGGCAGCGTGTTCAGAAACATGGTGGGAGATTCTGCCCAGTTCATTCT
GAGGATGCGCCAAGTTCTCCAGGAGAGGCGCCGATCAAAGACGCCTGGTC
CAGGTCACAAACTCCGTAACAACACCATGACACCTTACTACCTGCAGACA
TCACGAGATGTCAAGCGCCTCGAGGCAACAGCAAGGAGCCCAGTTTTCTC
GCATGTATCCACCACCCTCAGTGGCCTGTCTACACTACGGGTCATGAAGA
GGCAAGACTCTTTCTTGGAACAGTTTCATCACTGCCTAGACTACCACAGT
TCAGGGTGGTTCCTCTTCATCTCCTGTGCACGGTGGTTCCAGATCCGACT
GGACTGGCTCTGTGCAGCCTTTGTTGCCACAGTGGCTTTTGGTGCAATTT
TGGCTTCAGACAGTGTGAGTAGAGGTCTGGTGGGCCTGTCCCTCACCCAG
GCCATCATGCTGATGGGGGTGTTCCAGTGGGTCGTCAAGCAGAGTGCAGA
GGTGGAAAACCAGATGACATCAGTGGAACGGGTGGTGTCCTACACCCATC
TTGAGAAGGAACCTCCCCTAATCCTTCACCCTCGTCCACCCTCTAACTGG
CCCAGCCAAGGCAGGATTCAGCTGGATAATGTCACCATGCGATATGGCAG
CAAATTGACACCCACCCTGAACAATGTGTCTGTCATCATTTCACCAGGGG
AAAAGATTGGTATTGTCGGTCGCACAGGGGCAGGAAAGACATCTCTGATC
ATGTCCCTGTTCCGTTTGGTGGAGTCTGACGGCACTGTAATGATTGACGG
CTACATAACAACAGAGGTAGGACTGAATGACCTTCGTAGCCGCATGACAG
TCATTCCACAGGATCCTGTCCTTTTTAAAGGCAGCCTACGACAGAACTTG
GACCCTTTCTCCAAACACTCAGACACAGAGCTGTGGGCAGCCCTGGAGGA
GGTCCAGCTGAAACAAGTGGTGGAGAAACTGCCTGAGGGACTGGAGACTG
GGCTTATTGAATTTGGTGCTAACTTCAGTTTGGGGCAGAGACAACTGCTA
TGTCTGGGAAGGGCTATCCTGAAGAAGAGTCGCATTGTTGTGCTGGATGA
GGCCACTGCTAATGTGGACCCTCTGACAGATGGTCTGATCCTGCGGATGA
TTGAGAAGAAGTTTGCAGACTGCACAGTCCTGACCATTGCTCACAGGCTC
CATTCCATCATTGACTGCAACAAAGTCATGGTTTTGCAAGATGGCGGAAT
TGTTGAGTTTGACGAGCCATCTGTGCTGCTTTTTCGAGAGGGCAGCGTGT
TCAGAAACATGGTGGGAGATTCTGCCCAGTTCATTCTGAGGATGCGCCAA
GTTCTCCAGGAGAGGCGCCGATCAAAGACGCCTGGTCCAGGTCACAAACT
CCGTAACAACACCATGACACCTTACTACCTGCAGACATCACGAGATGTCA
AGCGCCTCGAGGCAACAGCAAGGAGCCCAGTTTTCTCGCATGTATCCACC
ACCCTCAGTGGCCTGTCTACACTACGGGTCATGAAGAGGCAAGACTCTTT
CTTGGAACAGTTTCATCACTGCCTAGACTACCACAGTTCAGGGTGGTTCC
TCTTCATCTCCTGTGCACGGTGGTTCCAGATCCGACTGGACTGGCTCTGT
GCAGCCTTTGTTGCCACAGTGGCTTTTGGTGCAATTTTGGCTTCAGACAG
TGTGAGTAGAGGTCTGGTGGGCCTGTCCCTCACCCAGGCCATCATGCTGA
TGGGGGTGTTCCAGTGGGTCGTCAAGCAGAGTGCAGAGGTGGAAAACCAG
ATGACATCAGTGGAACGGGTGGTGTCCTACACCCATCTTGAGAAGGAACC
TCCCCTAATCCTTCACCCTCGTCCACCCTCTAACTGGCCCAGCCAAGGCA
GGATTCAGCTGGATAATGTCACCATGCGATATGGCAGCAAATTGACACCC
ACCCTGAACAATGTGTCTGTCATCATTTCACCAGGGGAAAAGATTGGTAT
TGTCGGTCGCACAGGGGCAGGAAAGACATCTCTGATCATGTCCCTGTTCC
GTTTGGTGGAGTCTGACGGCACTGTAATGATTGACGGCTACATAACAACA
GAGGTAGGACTGAATGACCTTCGTAGCCGCATGACAGTCATTCCACAGGA
TCCTGTCCTTTTTAAAGGCAGCCTACGACAGAACTTGGACCCTTTCTCCA
AACACTCAGACACAGAGCTGTGGGCAGCCCTGGAGGAGGTCCAGCTGAAA
CAAGTGGTGGAGAAACTGCCTGAGGGACTGGAGACTGGGCTTATTGAATT
TGGTGCTAACTTCAGTTTGGGGCAGAGACAACTGCTATGTCTGGGAAGGG
CTATCCTGAAGAAGAGTCGCATTGTTGTGCTGGATGAGGCCACTGCTAAT
GTGGACCCTCTGACAGATGGTCTGATCCTGCGGATGATTGAGAAGAAGTT
TGCAGACTGCACAGTCCTGACCATTGCTCACAGGCTCCATTCCATCATTG
ACTGCAACAAAGTCATGGTTTTGCAAGATGGCGGAATTGTTGAGTTTGAC
GAGCCATCTGTGCTGCTTTTTCGAGAGGGCAGCGTGTTCAGAAACATGGT
GGGAGATTCTGCCCAGTTCATTCTGAGGATGCGCCAAGTTCTCCAGGAGA
GGCGCCGATCAAAGACGCCTGGTCCAGGTCACAAACTCCGTAACAACACC
ATGACACCTTACTACCTGCAGACATCACGAGATGTCAAGCGCCTCGAGGC
AACAGCAAGGAGCCCAGTTTTCTCGCATGTATCCACCACCCTCAGTGGCC
TGTCTACACTACGGGTCATGAAGAGGCAAGACTCTTTCTTGGAACAGTTT
CATCACTGCCTAGACTACCACAGTTCAGGGTGGTTCCTCTTCATCTCCTG
TGCACGGTGGTTCCAGATCCGACTGGACTGGCTCTGTGCAGCCTTTGTTG
CCACAGTGGCTTTTGGTGCAATTTTGGCTTCAGACAGTGTGAGTAGAGGT
CTGGTGGGCCTGTCCCTCACCCAGGCCATCATGCTGATGGGGGTGTTCCA
GTGGGTCGTCAAGCAGAGTGCAGAGGTGGAAAACCAGATGACATCAGTGG
AACGGGTGGTGTCCTACACCCATCTTGAGAAGGAACCTCCCCTAATCCTT
CACCCTCGTCCACCCTCTAACTGGCCCAGCCAAGGCAGGATTCAGCTGGA
TAATGTCACCATGCGATATGGCAGCAAATTGACACCCACCCTGAACAATG
TGTCTGTCATCATTTCACCAGGGGAAAAGATTGGTATTGTCGGTCGCACA
GGGGCAGGAAAGACATCTCTGATCATGTCCCTGTTCCGTTTGGTGGAGTC
TGACGGCACTGTAATGATTGACGGCTACATAACAACAGAGGTAGGACTGA
ATGACCTTCGTAGCCGCATGACAGTCATTCCACAGGATCCTGTCCTTTTT
AAAGGCAGCCTACGACAGAACTTGGACCCTTTCTCCAAACACTCAGACAC
AGAGCTGTGGGCAGCCCTGGAGGAGGTCCAGCTGAAACAAGTGGTGGAGA
AACTGCCTGAGGGACTGGAGACTGGGCTTATTGAATTTGGTGCTAACTTC
AGTTTGGGGCAGAGACAACTGCTATGTCTGGGAAGGGCTATCCTGAAGAA
GAGTCGCATTGTTGTGCTGGATGAGGCCACTGCTAATGTGGACCCTCTGA
CAGATGGTCTGATCCTGCGGATGATTGAGAAGAAGTTTGCAGACTGCACA
GTCCTGACCATTGCTCACAGGCTCCATTCCATCATTGACTGCAACAAAGT
CATGGTTTTGCAAGATGGCGGAATTGTTGAGTTTGACGAGCCATCTGTGC
TGCTTTTTCGAGAGGGCAGCGTGTTCAGAAACATGGTGGGAGATTCTGCC
CAGTTCATTCTGAGGATGCGCCAAGTTCTCCAGGAGAGGCGCCGATCAAA
GACGCCTGGTCCAGGTCACAAACTCCGTAACAACACCATGACACCTTACT
ACCTGCAGACATCACGAGATGTCAAGCGCCTCGAGGCAACAGCAAGGAGC
CCAGTTTTCTCGCATGTATCCACCACCCTCAGTGGCCTGTCTACACTACG
GGTCATGAAGAGGCAAGACTCTTTCTTGGAACAGTTTCATCACTGCCTAG
ACTACCACAGTTCAGGGTGGTTCCTCTTCATCTCCTGTGCACGGTGGTTC
CAGATCCGACTGGACTGGCTCTGTGCAGCCTTTGTTGCCACAGTGGCTTT
TGGTGCAATTTTGGCTTCAGACAGTGTGAGTAGAGGTCTGGTGGGCCTGT
CCCTCACCCAGGCCATCATGCTGATGGGGGTGTTCCAGTGGGTCGTCAAG
CAGAGTGCAGAGGTGGAAAACCAGATGACATCAGTGGAACGGGTGGTGTC
CTACACCCATCTTGAGAAGGAACCTCCCCTAATCCTTCACCCTCGTCCAC
CCTCTAACTGGCCCAGCCAAGGCAGGATTCAGCTGGATAATGTCACCATG
CGATATGGCAGCAAATTGACACCCACCCTGAACAATGTGTCTGTCATCAT
TTCACCAGGGGAAAAGATTGGTATTGTCGGTCGCACAGGGGCAGGAAAGA
CATCTCTGATCATGTCCCTGTTCCGTTTGGTGGAGTCTGACGGCACTGTA
ATGATTGACGGCTACATAACAACAGAGGTAGGACTGAATGACCTTCGTAG
CCGCATGACAGTCATTCCACAGGATCCTGTCCTTTTTAAAGGCAGCCTAC
GACAGAACTTGGACCCTTTCTCCAAACACTCAGACACAGAGCTGTGGGCA
GCCCTGGAGGAGGTCCAGCTGAAACAAGTGGTGGAGAAACTGCCTGAGGG
ACTGGAGACTGGGCTTATTGAATTTGGTGCTAACTTCAGTTTGGGGCAGA
GACAACTGCTATGTCTGGGAAGGGCTATCCTGAAGAAGAGTCGCATTGTT
GTGCTGGATGAGGCCACTGCTAATGTGGACCCTCTGACAGATGGTCTGAT
CCTGCGGATGATTGAGAAGAAGTTTGCAGACTGCACAGTCCTGACCATTG
CTCACAGGCTCCATTCCATCATTGACTGCAACAAAGTCATGGTTTTGCAA
GATGGCGGAATTGTTGAGTTTGACGAGCCATCTGTGCTGCTTTTTCGAGA
GGGCAGCGTGTTCAGAAACATGGTGGGAGATTCTGCCCAGTTCATTCTGA
GGATGCGCCAAGTTCTCCAGGAGAGGCGCCGATCAAAGACGCCTGGTCCA
GGTCACAAACTCCGTAACAACACCATGACACCTTACTACCTGCAGACATC
ACGAGATGTCAAGCGCCTCGAGGCAACAGCAAGGAGCCCAGTTTTCTCGC
ATGTATCCACCACCCTCAGTGGCCTGTCTACACTACGGGTCATGAAGAGG
CAAGACTCTTTCTTGGAACAGTTTCATCACTGCCTAGACTACCACAGTTC
AGGGTGGTTCCTCTTCATCTCCTGTGCACGGTGGTTCCAGATCCGACTGG
ACTGGCTCTGTGCAGCCTTTGTTGCCACAGTGGCTTTTGGTGCAATTTTG
GCTTCAGACAGTGTGAGTAGAGGTCTGGTGGGCCTGTCCCTCACCCAGGC
CATCATGCTGATGGGGGTGTTCCAGTGGGTCGTCAAGCAGAGTGCAGAGG
TGGAAAACCAGATGACATCAGTGGAACGGGTGGTGTCCTACACCCATCTT
GAGAAGGAACCTCCCCTAATCCTTCACCCTCGTCCACCCTCTAACTGGCC
CAGCCAAGGCAGGATTCAGCTGGATAATGTCACCATGCGATATGGCAGCA
AATTGACACCCACCCTGAACAATGTGTCTGTCATCATTTCACCAGGGGAA
AAGATTGGTATTGTCGGTCGCACAGGGGCAGGAAAGACATCTCTGATCAT
GTCCCTGTTCCGTTTGGTGGAGTCTGACGGCACTGTAATGATTGACGGCT
ACATAACAACAGAGGTAGGACTGAATGACCTTCGTAGCCGCATGACAGTC
ATTCCACAGGATCCTGTCCTTTTTAAAGGCAGCCTACGACAGAACTTGGA
CCCTTTCTCCAAACACTCAGACACAGAGCTGTGGGCAGCCCTGGAGGAGG
TCCAGCTGAAACAAGTGGTGGAGAAACTGCCTGAGGGACTGGAGACTGGG
CTTATTGAATTTGGTGCTAACTTCAGTTTGGGGCAGAGACAACTGCTATG
TCTGGGAAGGGCTATCCTGAAGAAGAGTCGCATTGTTGTGCTGGATGAGG
CCACTGCTAATGTGGACCCTCTGACAGATGGTCTGATCCTGCGGATGATT
GAGAAGAAGTTTGCAGACTGCACAGTCCTGACCATTGCTCACAGGCTCCA
TTCCATCATTGACTGCAACAAAGTCATGGTTTTGCAAGATGGCGGAATTG
TTGAGTTTGACGAGCCATCTGTGCTGCTTTTTCGAGAGGGCAGCGTGTTC
AGAAACATGGTGGGAGATTCTGCCCAGTTCATTCTGAGGATGCGCCAAGT
TCTCCAGGAGAGGCGCCGATCAAAGACGCCTGGTCCAGGTCACAAACTCC
GTAACAACACCATGACACCT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
gene:BL97296gene:BL97296Branchiostoma lanceolatumgene
The following polypeptide feature(s) derives from this mRNA:
Feature NameUnique NameSpeciesType
transcript:BL97296_cuf0transcript:BL97296_cuf0-proteinBranchiostoma lanceolatumpolypeptide
The following exon feature(s) are a part of this mRNA:
Feature NameUnique NameSpeciesType
BL97296_cuf0-E1BL97296_cuf0-E1-1564476830-347674Branchiostoma lanceolatumexon
BL97296_cuf0-E2BL97296_cuf0-E2-1564476830-347671Branchiostoma lanceolatumexon
BL97296_cuf0-E3BL97296_cuf0-E3-1564476830-347669Branchiostoma lanceolatumexon
BL97296_cuf0-E4BL97296_cuf0-E4-1564476830-347667Branchiostoma lanceolatumexon
BL97296_cuf0-E5BL97296_cuf0-E5-1564476830-347665Branchiostoma lanceolatumexon
BL97296_cuf0-E6BL97296_cuf0-E6-1564476830-347663Branchiostoma lanceolatumexon
BL97296_cuf0-E7BL97296_cuf0-E7-1564476830-347661Branchiostoma lanceolatumexon
BL97296_cuf0-E8BL97296_cuf0-E8-1564476830-347659Branchiostoma lanceolatumexon
BL97296_cuf0-E9BL97296_cuf0-E9-1564476830-347657Branchiostoma lanceolatumexon
BL97296_cuf0-E10BL97296_cuf0-E10-1564476830-347655Branchiostoma lanceolatumexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Sc0000149genomeSc0000149:325438..330647 -
Properties
Property NameValue
Transcript idBL97296_cuf0
Biotypeprotein_coding