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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97292_cuf2 >transcript:BL97292_cuf2-protein ID=transcript:BL97292_cuf2-protein|Name=transcript:BL97292_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=170bp
PTCARKQCAQLTAPTHGNMTGGYFYGDQVTFSCAIGFQLNNSDVRVCGDN
GVWSGEQPTCEDVECSLLPTPPNSNVIMSGVSFRDTANITCDSGYDLVSG
DTVRTCQASGEWSGTPGLCQKKCCVQPSLQYGSYNGTICYNETISIQCEE
GHYLTSKDSELTCTEAGTWD Run BLAST on NCBI mRNA from alignment at Sc0000250:280015..281665- Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97292_cuf2 ID=transcript:BL97292_cuf2|Name=transcript:BL97292_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=1651bp|location=Sequence derived from alignment at Sc0000250:280015..281665- (Branchiostoma lanceolatum)
CCAACTTGTGCCAGTAAGTGGAAACCATATGTAAACGTGGACGACTAGCG
TAAATTGTAAACCGCAAAGTGAGTGACTACGATACAAGGACCAACAGAAA
AAATATCGTTTGCAGCATCAATAAGAAACCTTTCAGAAAGAACACTATAT
GTGTTTTTGAGTACTACTCTTGATTTCTTCGCTGCTTGTATTTTCAAAAG
CTTCCAACTATGATTCATGTTGTTGACGTCAGTTTTAGACATGTAGGTAT
TTCTAAGCAAAGAGTATATATTCGGCCCTTGAAAAATCTGAAAATGAGCA
AACGCTGTACATTGCGTTTGACTGCACCGTCTGTATGAGCCAATTTGAAA
CATTGTGCCTGTACCTGATTTTGCTGGAAAATCATTTTCATCAGTTTTAT
CTTTTTTTTAGTGACAGCTGAAGAAAAATGGTTTTCCCATATCTCCAGGG
AAACAGTGCGCACAGTTGACAGCCCCTACTCATGGCAACATGACTGGTGG
CTATTTCTATGGAGACCAAGTCACATTTTCCTGTGCTATTGGATTCCAAC
TGAATAACAGTGATGTCAGAGTTTGTGGAGACAATGGTGTCTGGAGTGGA
GAACAGCCGACCTGTGAAGGTGCACTCGAATCACAACGCAATAGATATGA
ATTAGCATAAATATATGACTCAGATACAAATAGACATAAGCTAATATAGT
GGTCCTTAACATTGCTCCCTACCAACTTTCTTCGATAACGGCATCAACGA
GGCATCGTCAGTATACACCAACTTTTGTGTTGGATTGTGTTCGTGGAAGA
CAATGAATCATTGTCTACTCTTTCATTTGAATTTATTATGTTTTATTAAT
GTAAAGACTGTAATCATCACCATCATATCATACACTTCTCATATCAAAAT
CAATATTCTGTTGGCTTTCCTGCAGGCTAGCCAAAGCCTGGGTGATTGTT
ATTAAATAGGTTTGATTTTACGATATATGGTGTATGATCGATTCTGTTTA
TTACAGACGTAGAGTGTTCCTTGCTTCCGACACCACCAAACAGCAACGTG
ATAATGTCTGGGGTCAGCTTTCGGGACACGGCCAACATTACCTGTGATTC
TGGGTACGACCTGGTCAGTGGGGACACCGTCAGGACTTGTCAAGCTAGCG
GGGAGTGGTCTGGTACTCCCGGATTGTGCCAAAGTAAGACTGTTAATACT
TTCATCAAAGATGTATCGCTGCATAAAGCCTTCAAAGTTGAAATAGAAGT
AATTCAAGAGCACGTCCCGTTTAATTCTCTTAATTCAAGCTGTATATTAA
GTAAAGGTCCCGAGTTCGAATCCCCCTGATGTTGTGCCCTTGGGAAAGGC
ACTGTGCACGACTTTCCTCACTTCGCCCAGGTGTATAAAAATGGGTATGT
TGTTATCTGTACGTGGTACTGTAAATATAAGTTATAAAAACCTATAAAAA
AAGATAACGTGGGGTTAATTTTTCTTTTCTTCTACTTGCTTTTTTTTTAC
AGAGAAGTGCTGTGTACAGCCTTCTTTACAGTACGGCAGCTACAACGGAA
CGATCTGTTACAATGAAACCATCTCCATACAGTGCGAGGAAGGTCATTAT
TTAACGTCAAAAGATTCTGAACTGACTTGCACTGAAGCAGGAACATGGGA
C Coding sequence (CDS) from alignment at Sc0000250:280015..281665- >transcript:BL97292_cuf2 ID=transcript:BL97292_cuf2|Name=transcript:BL97292_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=2040bp|location=Sequence derived from alignment at Sc0000250:280015..281665- (Branchiostoma lanceolatum)
CCAACTTGTGCCAGGAAACAGTGCGCACAGTTGACAGCCCCTACTCATGG
CAACATGACTGGTGGCTATTTCTATGGAGACCAAGTCACATTTTCCTGTG
CTATTGGATTCCAACTGAATAACAGTGATGTCAGAGTTTGTGGAGACAAT
GGTGTCTGGAGTGGAGAACAGCCGACCTGTGAAGACGTAGAGTGTTCCTT
GCTTCCGACACCACCAAACAGCAACGTGATAATGTCTGGGGTCAGCTTTC
GGGACACGGCCAACATTACCTGTGATTCTGGGTACGACCTGGTCAGTGGG
GACACCGTCAGGACTTGTCAAGCTAGCGGGGAGTGGTCTGGTACTCCCGG
ATTGTGCCAAAAGAAGTGCTGTGTACAGCCTTCTTTACAGTACGGCAGCT
ACAACGGAACGATCTGTTACAATGAAACCATCTCCATACAGTGCGAGGAA
GGTCATTATTTAACGTCAAAAGATTCTGAACTGACTTGCACTGAAGCAGG
AACATGGGACCCAACTTGTGCCAGGAAACAGTGCGCACAGTTGACAGCCC
CTACTCATGGCAACATGACTGGTGGCTATTTCTATGGAGACCAAGTCACA
TTTTCCTGTGCTATTGGATTCCAACTGAATAACAGTGATGTCAGAGTTTG
TGGAGACAATGGTGTCTGGAGTGGAGAACAGCCGACCTGTGAAGACGTAG
AGTGTTCCTTGCTTCCGACACCACCAAACAGCAACGTGATAATGTCTGGG
GTCAGCTTTCGGGACACGGCCAACATTACCTGTGATTCTGGGTACGACCT
GGTCAGTGGGGACACCGTCAGGACTTGTCAAGCTAGCGGGGAGTGGTCTG
GTACTCCCGGATTGTGCCAAAAGAAGTGCTGTGTACAGCCTTCTTTACAG
TACGGCAGCTACAACGGAACGATCTGTTACAATGAAACCATCTCCATACA
GTGCGAGGAAGGTCATTATTTAACGTCAAAAGATTCTGAACTGACTTGCA
CTGAAGCAGGAACATGGGACCCAACTTGTGCCAGGAAACAGTGCGCACAG
TTGACAGCCCCTACTCATGGCAACATGACTGGTGGCTATTTCTATGGAGA
CCAAGTCACATTTTCCTGTGCTATTGGATTCCAACTGAATAACAGTGATG
TCAGAGTTTGTGGAGACAATGGTGTCTGGAGTGGAGAACAGCCGACCTGT
GAAGACGTAGAGTGTTCCTTGCTTCCGACACCACCAAACAGCAACGTGAT
AATGTCTGGGGTCAGCTTTCGGGACACGGCCAACATTACCTGTGATTCTG
GGTACGACCTGGTCAGTGGGGACACCGTCAGGACTTGTCAAGCTAGCGGG
GAGTGGTCTGGTACTCCCGGATTGTGCCAAAAGAAGTGCTGTGTACAGCC
TTCTTTACAGTACGGCAGCTACAACGGAACGATCTGTTACAATGAAACCA
TCTCCATACAGTGCGAGGAAGGTCATTATTTAACGTCAAAAGATTCTGAA
CTGACTTGCACTGAAGCAGGAACATGGGACCCAACTTGTGCCAGGAAACA
GTGCGCACAGTTGACAGCCCCTACTCATGGCAACATGACTGGTGGCTATT
TCTATGGAGACCAAGTCACATTTTCCTGTGCTATTGGATTCCAACTGAAT
AACAGTGATGTCAGAGTTTGTGGAGACAATGGTGTCTGGAGTGGAGAACA
GCCGACCTGTGAAGACGTAGAGTGTTCCTTGCTTCCGACACCACCAAACA
GCAACGTGATAATGTCTGGGGTCAGCTTTCGGGACACGGCCAACATTACC
TGTGATTCTGGGTACGACCTGGTCAGTGGGGACACCGTCAGGACTTGTCA
AGCTAGCGGGGAGTGGTCTGGTACTCCCGGATTGTGCCAAAAGAAGTGCT
GTGTACAGCCTTCTTTACAGTACGGCAGCTACAACGGAACGATCTGTTAC
AATGAAACCATCTCCATACAGTGCGAGGAAGGTCATTATTTAACGTCAAA
AGATTCTGAACTGACTTGCACTGAAGCAGGAACATGGGAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000250 | genome | Sc0000250:280015..281665 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97292_cuf2 |
| Biotype | protein_coding |
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