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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97283_cuf7 >transcript:BL97283_cuf7-protein ID=transcript:BL97283_cuf7-protein|Name=transcript:BL97283_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=388bp
MAILHDSLIGVEIKVEKLWLKRESLFNLKMKDADLPAEPEFVPVVKNVPD
SAAVELHVRHRIIKVRPASSDNCTDNGSQATRSENKAPVVVASRSPSKLE
DTPENHQTNQVVKMKSILSKLEKSDKESTRKVSFALNVLVRHTEEHKVEW
PSVKLSVHNEMALTYLQMLTDDHIQAAQMLLRRQYPALQGLEGPAVGLCD
DGFAKMTGKGLQIHHNNHQHWVLSSYTDGKVCLYDSLSVPMTPSLQTQLY
QSYAAFADQTRNTLTVFLLDVQHQRNVLDCGLFAIAWAVDIAEGQDVSGV
LYNNRKMRSHLKTCFKQGNLTPFPRLSSTRKKEGRTKVQRITLVCHCKQG
KRLGRMQRCEACQRIFHVSCLPVSPPSDGTWTCGDCAV Run BLAST on NCBI mRNA from alignment at Sc0000012:4142924..4145188+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97283_cuf7 ID=transcript:BL97283_cuf7|Name=transcript:BL97283_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=2265bp|location=Sequence derived from alignment at Sc0000012:4142924..4145188+ (Branchiostoma lanceolatum)
GGNTAACGCAAATATGACAGGATAGGCAGCAGTAAGGTAACTTAGTTAAT
TCCTATCCTGTCTTTAGAACCACCCTCCTTAAGTCCCTTTGTTTCCTCTG
CCCCTTGCCAGCTGGGCTTGACAGTTTTTGTACATCATTGTTGTTATTGG
ATGATTTGTTTATTTATTTCATATGGAAATATACAATAAAAAAAACTTAC
TAAAACATTTACATCGGCCCAGATGATGACTCCATGGCCATTCTTCATGA
CAGCCTGATCGGCGTGGAGATTAAAGTGGAGAAACTGTGGCTGAAGAGAG
AGTCGCTCTTCAACCTCAAGTAAGTACAACATCTTACAAGAAATACTGCT
TGAGCCTGATGCCCTTGAAGGTGCGTGAAATGATCTTCCTGCTACTGTAT
ACTTTACAGCTACTGTAATTGTGATTAGAAAGAATAGACTGAAAAGTTGA
AAGTGATAATTATTGAAAACAAACACTCAACATATAGGCATGAGAGGTTC
TAAGAAACTACAACATTTCTATCCTCACAGGATGAAGGATGCGGACCTCC
CAGCAGAGCCTGAGTTTGTCCCAGTTGTCAAAAATGTTCCCGATTCTGCA
GCAGTGGAACTTCATGTTCGCCACCGCATCATCAAGGTCCGCCCCGCCTC
CTCAGACAACTGCACAGACAACGGCAGTCAAGCGACCCGCTCCGAGAACA
AGGCGCCTGTGGTGGTGGCATCCAGGTCCCCGTCAAAATTAGAGGACACC
CCAGAAAACCACCAAACCAACCAAGTCGTAAAAATGAAGTCCATCCTTTC
CAAGCTGGAAAAAAGTGACAAGGAGTCAACCAGGAAAGTGTCTTTCGCTC
TGAACGTTCTTGTTCGTCACACTGAGGAGCATAAGGTGGAGTGGCCAAGT
GTCAAGTTGAGCGTTCATAACGAGATGGCTCTGACATACCTCCAGATGCT
GACAGACGACCACATCCAGGCTGCCCAGATGCTGCTCCGCCGCCAGTACC
CGGCACTCCAAGGGCTAGAGGGGCCTGCAGTTGGTCTCTGTGATGACGGG
TTTGCCAAGATGACAGGAAAGGGGCTACAAATCCACCACAACAATCATCA
GCACTGGGTTCTGTCGTCTTACACAGACGGAAAGGTGTGCCTGTATGACA
GCCTCAGTGTCCCCATGACCCCATCGCTGCAGACCCAGCTTTACCAGTCC
TACGCCGCGTTTGCTGACCAAACAAGGAACACCCTGACCGTCTTCTTACT
GGACGTACAGCATCAGAGGAACGTCTTGGATTGTGGGCTGTTCGCCATCG
CCTGGGCAGTGGACATCGCAGAGGGGCAAGACGTGAGCGGGGTTTTGTAT
AACAACAGGAAGATGAGGAGCCATCTGAAGACGTGCTTCAAACAAGGGAA
CCTCACACCGTTTCCACGTCTGTCTAGCACCAGAAAGAAGGAAGGTCGAA
CCAAGGTACAGCGAATCACACTGGTCTGCCACTGCAAGCAGGGGAAGCGT
CTGGGAAGGATGCAGAGGTGCGAGGCATGCCAGAGGATCTTTCACGTCAG
CTGCCTGCCAGTCAGCCCTCCCAGTGATGGCACATGGACATGTGGAGACT
GCGCTGTGTAAAAAACTCTTCACTACAGTGTAGAGAGGACTGTACTGATT
GACATGTAAAATCAAGCATAACTGAATGTTCTCCTGATGGAAGTAAAGAA
ACAAAAGCACTCTAGGACGGAAAAGCTGGCTGGTCACAGAGTCATGACAA
AGTGTTAGACTGATTGCAACACCATTACTGTTCAATTTTTTGCGTGTGTA
TTTAATCATTTTTATTTTTTAATATTAGGGATTTAGTCTAGGATCTGTGG
AATTGTGTCCACTTCAATCTGTCCTCAGTTCATGAAAGTTTGAAAAGACT
TTGTTAAGTACATTTGCCTGGTTTAAATTTTACAGATAATGGATACAATT
TGTCTTGTTTGAATTGTATCAGATAATGAATACTTTGATTGTCATGTTAG
ATAATGTTACAATGTAGGTTATGTCTTTGAAAATTTTGAGTCCTAAATAG
CAAGAAACTTCAGGACTTGTTTGAATGGATTTTTTAATGTTTTGCATGTG
TATTTATTTATTCATATTCTTTTGATATTAGGGATTTAGTCTAGGATCTA
TAGGAATTGTGTCCGCTTCAATCTGTCCTCAATTCATGAAAGATTGAAAA
GACTTTGTTAAGTACATTAGCCTTGTTTAAATTTTACATAATTTTTAATG
AATACTTTGATTACC Coding sequence (CDS) from alignment at Sc0000012:4142924..4145188+ >transcript:BL97283_cuf7 ID=transcript:BL97283_cuf7|Name=transcript:BL97283_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=2334bp|location=Sequence derived from alignment at Sc0000012:4142924..4145188+ (Branchiostoma lanceolatum)
ATGGCCATTCTTCATGACAGCCTGATCGGCGTGGAGATTAAAGTGGAGAA
ACTGTGGCTGAAGAGAGAGTCGCTCTTCAACCTCAAGATGAAGGATGCGG
ACCTCCCAGCAGAGCCTGAGTTTGTCCCAGTTGTCAAAAATGTTCCCGAT
TCTGCAGCAGTGGAACTTCATGTTCGCCACCGCATCATCAAGGTCCGCCC
CGCCTCCTCAGACAACTGCACAGACAACGGCAGTCAAGCGACCCGCTCCG
AGAACAAGGCGCCTGTGGTGGTGGCATCCAGGTCCCCGTCAAAATTAGAG
GACACCCCAGAAAACCACCAAACCAACCAAGTCGTAAAAATGAAGTCCAT
CCTTTCCAAGCTGGAAAAAAGTGACAAGGAGTCAACCAGGAAAGTGTCTT
TCGCTCTGAACGTTCTTGTTCGTCACACTGAGGAGCATAAGGTGGAGTGG
CCAAGTGTCAAGTTGAGCGTTCATAACGAGATGGCTCTGACATACCTCCA
GATGCTGACAGACGACCACATCCAGGCTGCCCAGATGCTGCTCCGCCGCC
AGTACCCGGCACTCCAAGGGCTAGAGGGGCCTGCAGTTGGTCTCTGTGAT
GACGGGTTTGCCAAGATGACAGGAAAGGGGCTACAAATCCACCACAACAA
TCATCAGCACTGGGTTCTGTCGTCTTACACAGACGGAAAGGTGTGCCTGT
ATGACAGCCTCAGTGTCCCCATGACCCCATCGCTGCAGACCCAGCTTTAC
CAGTCCTACGCCGCGTTTGCTGACCAAACAAGGAACACCCTGACCGTCTT
CTTACTGGACGTACAGCATCAGAGGAACGTCTTGGATTGTGGGCTGTTCG
CCATCGCCTGGGCAGTGGACATCGCAGAGGGGCAAGACGTGAGCGGGGTT
TTGTATAACAACAGGAAGATGAGGAGCCATCTGAAGACGTGCTTCAAACA
AGGGAACCTCACACCGTTTCCACGTCTGTCTAGCACCAGAAAGAAGGAAG
GTCGAACCAAGGTACAGCGAATCACACTGGTCTGCCACTGCAAGCAGGGG
AAGCGTCTGGGAAGGATGCAGAGGTGCGAGGCATGCCAGAGGATCTTTCA
CGTCAGCTGCCTGCCAGTCAGCCCTCCCAGTGATGGCACATGGACATGTG
GAGACTGCGCTGTGTAAATGGCCATTCTTCATGACAGCCTGATCGGCGTG
GAGATTAAAGTGGAGAAACTGTGGCTGAAGAGAGAGTCGCTCTTCAACCT
CAAGATGAAGGATGCGGACCTCCCAGCAGAGCCTGAGTTTGTCCCAGTTG
TCAAAAATGTTCCCGATTCTGCAGCAGTGGAACTTCATGTTCGCCACCGC
ATCATCAAGGTCCGCCCCGCCTCCTCAGACAACTGCACAGACAACGGCAG
TCAAGCGACCCGCTCCGAGAACAAGGCGCCTGTGGTGGTGGCATCCAGGT
CCCCGTCAAAATTAGAGGACACCCCAGAAAACCACCAAACCAACCAAGTC
GTAAAAATGAAGTCCATCCTTTCCAAGCTGGAAAAAAGTGACAAGGAGTC
AACCAGGAAAGTGTCTTTCGCTCTGAACGTTCTTGTTCGTCACACTGAGG
AGCATAAGGTGGAGTGGCCAAGTGTCAAGTTGAGCGTTCATAACGAGATG
GCTCTGACATACCTCCAGATGCTGACAGACGACCACATCCAGGCTGCCCA
GATGCTGCTCCGCCGCCAGTACCCGGCACTCCAAGGGCTAGAGGGGCCTG
CAGTTGGTCTCTGTGATGACGGGTTTGCCAAGATGACAGGAAAGGGGCTA
CAAATCCACCACAACAATCATCAGCACTGGGTTCTGTCGTCTTACACAGA
CGGAAAGGTGTGCCTGTATGACAGCCTCAGTGTCCCCATGACCCCATCGC
TGCAGACCCAGCTTTACCAGTCCTACGCCGCGTTTGCTGACCAAACAAGG
AACACCCTGACCGTCTTCTTACTGGACGTACAGCATCAGAGGAACGTCTT
GGATTGTGGGCTGTTCGCCATCGCCTGGGCAGTGGACATCGCAGAGGGGC
AAGACGTGAGCGGGGTTTTGTATAACAACAGGAAGATGAGGAGCCATCTG
AAGACGTGCTTCAAACAAGGGAACCTCACACCGTTTCCACGTCTGTCTAG
CACCAGAAAGAAGGAAGGTCGAACCAAGGTACAGCGAATCACACTGGTCT
GCCACTGCAAGCAGGGGAAGCGTCTGGGAAGGATGCAGAGGTGCGAGGCA
TGCCAGAGGATCTTTCACGTCAGCTGCCTGCCAGTCAGCCCTCCCAGTGA
TGGCACATGGACATGTGGAGACTGCGCTGTGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000012 | genome | Sc0000012:4142924..4145188 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97283_cuf7 |
| Biotype | protein_coding |
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