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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97275_cuf2 >transcript:BL97275_cuf2-protein ID=transcript:BL97275_cuf2-protein|Name=transcript:BL97275_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=145bp
VSGMSSSTDLEFVNVTETTSTLRVTWVPPDAVLTGYRIMYGQEEATEQLI
PSPGPGERSALLEGLQPDTMYKVEIITIGVGQESLPLIGQNATEPDECAT
VNGRCDHICSNVPGGYRCQCHQGFVLMADAHGCGVCGQCQGGDVN Run BLAST on NCBI mRNA from alignment at Sc0000012:5029388..5030552+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97275_cuf2 ID=transcript:BL97275_cuf2|Name=transcript:BL97275_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=1165bp|location=Sequence derived from alignment at Sc0000012:5029388..5030552+ (Branchiostoma lanceolatum)
AGTTTCAGGAATGAGCTCCTCTACAGACCTGGAGTTCGTTAATGTGACCG
AGACGACGTCCACGCTGAGGGTCACCTGGGTGCCTCCTGATGCGGTCTTG
ACCGGATACCGCATCATGTACGGACAGGAGGAGGCGACGGAACAGCTCAT
CCCCTCCCCGGGTCCAGGAGAGAGATCTGCTCTGCTTGAGGGCCTCCAGC
CAGACACCATGTACAAGGTGGAGATCATCACCATCGGAGTTGGCCAAGAA
AGTCTGCCTCTGATTGGACAAAATGCAACTGGTAAGCACATTTAACAACT
TCTATTCATAATGTTATGGATTAAGATATCCATGCAAGAGCACTGATTAC
ACCATGCGGTTCTCCTGCAATACCCTTTATTTAATTCACTGTTTGATTCC
ACTCAAATGCAAAACTTCAGACTCAACTTTTTCTTACATCTGAGGTACAA
ACCTCTTTACTCTACATCAACAAGGGAGCCAGCAGCAAAACATTCAGATA
AGAACTTTTATCCTCTAGAATTGTAGCTTTAAGTTTGTAGTAACGGTTGT
AAAGTTTCTTGTAGATGATTCTTACTCTGAATTTTGCCTTTGTTCTCTTT
GCAGAGCCAGACGAATGTGCGACAGTGAACGGTCGGTGTGACCACATCTG
CTCCAACGTTCCGGGGGGGTACAGGTGCCAATGTCACCAGGGCTTCGTGC
TGATGGCAGACGCCCACGGCTGTGGAGGTAAAAAATGTTGTTGCGGGATT
GTAGTTCATTGCTCAGTCATGCACACAATAGGAATAAACATTAAGGCCTA
CTTCACATCATCTGCAGTTCATGATTTATCAAGCAGCTTATTCTCACAAT
GGACACTTAGAGGGTAATAACTTTGATCAAACTACACATTTCTGTTCTCT
ATTTGTTTTATGTTCTTTGTCATTTGTGTTCTATGTTAACCCAACATTGA
TGCCAGCTTCGCTAGGAGAGGTTTGAAATGTAAGCATAACAATGTAATTA
TTCAACCTGCAATATTTAAAATGNAACAATGTAATTATTCAACCTGCAAC
ATTTAAAATGGCAATCTAGAAAAGGCAACATAGCATTGTCTACTACATTG
TGTTGTGTTGATAGCGTGTTTTTTGTTTCTAAGTGTGCGGCCAATGCCAA
GGTGGGGACGTCAAC Coding sequence (CDS) from alignment at Sc0000012:5029388..5030552+ >transcript:BL97275_cuf2 ID=transcript:BL97275_cuf2|Name=transcript:BL97275_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1305bp|location=Sequence derived from alignment at Sc0000012:5029388..5030552+ (Branchiostoma lanceolatum)
GTTTCAGGAATGAGCTCCTCTACAGACCTGGAGTTCGTTAATGTGACCGA
GACGACGTCCACGCTGAGGGTCACCTGGGTGCCTCCTGATGCGGTCTTGA
CCGGATACCGCATCATGTACGGACAGGAGGAGGCGACGGAACAGCTCATC
CCCTCCCCGGGTCCAGGAGAGAGATCTGCTCTGCTTGAGGGCCTCCAGCC
AGACACCATGTACAAGGTGGAGATCATCACCATCGGAGTTGGCCAAGAAA
GTCTGCCTCTGATTGGACAAAATGCAACTGAGCCAGACGAATGTGCGACA
GTGAACGGTCGGTGTGACCACATCTGCTCCAACGTTCCGGGGGGGTACAG
GTGCCAATGTCACCAGGGCTTCGTGCTGATGGCAGACGCCCACGGCTGTG
GAGTGTGCGGCCAATGCCAAGGTGGGGACGTCAACGTTTCAGGAATGAGC
TCCTCTACAGACCTGGAGTTCGTTAATGTGACCGAGACGACGTCCACGCT
GAGGGTCACCTGGGTGCCTCCTGATGCGGTCTTGACCGGATACCGCATCA
TGTACGGACAGGAGGAGGCGACGGAACAGCTCATCCCCTCCCCGGGTCCA
GGAGAGAGATCTGCTCTGCTTGAGGGCCTCCAGCCAGACACCATGTACAA
GGTGGAGATCATCACCATCGGAGTTGGCCAAGAAAGTCTGCCTCTGATTG
GACAAAATGCAACTGAGCCAGACGAATGTGCGACAGTGAACGGTCGGTGT
GACCACATCTGCTCCAACGTTCCGGGGGGGTACAGGTGCCAATGTCACCA
GGGCTTCGTGCTGATGGCAGACGCCCACGGCTGTGGAGTGTGCGGCCAAT
GCCAAGGTGGGGACGTCAACGTTTCAGGAATGAGCTCCTCTACAGACCTG
GAGTTCGTTAATGTGACCGAGACGACGTCCACGCTGAGGGTCACCTGGGT
GCCTCCTGATGCGGTCTTGACCGGATACCGCATCATGTACGGACAGGAGG
AGGCGACGGAACAGCTCATCCCCTCCCCGGGTCCAGGAGAGAGATCTGCT
CTGCTTGAGGGCCTCCAGCCAGACACCATGTACAAGGTGGAGATCATCAC
CATCGGAGTTGGCCAAGAAAGTCTGCCTCTGATTGGACAAAATGCAACTG
AGCCAGACGAATGTGCGACAGTGAACGGTCGGTGTGACCACATCTGCTCC
AACGTTCCGGGGGGGTACAGGTGCCAATGTCACCAGGGCTTCGTGCTGAT
GGCAGACGCCCACGGCTGTGGAGTGTGCGGCCAATGCCAAGGTGGGGACG
TCAAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000012 | genome | Sc0000012:5029388..5030552 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97275_cuf2 |
| Biotype | protein_coding |
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