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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97273_cuf2 >transcript:BL97273_cuf2-protein ID=transcript:BL97273_cuf2-protein|Name=transcript:BL97273_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=139bp
IITGPFGLVLMPSRSHDEVFPRIYIGEGDIAKKVAWLQELGITHVVNAAH
NIGVFTGPHFYRDTAIQYLAKVLVHCLEGFSRSATLVIAYLMLKQGMTVQ
EAVKTVRDRREVCPNDGFLKQLCILNDKLLSSRSKQKES Run BLAST on NCBI mRNA from alignment at Sc0000012:3526248..3528333+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97273_cuf2 ID=transcript:BL97273_cuf2|Name=transcript:BL97273_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=2086bp|location=Sequence derived from alignment at Sc0000012:3526248..3528333+ (Branchiostoma lanceolatum)
CATCATCACGGGACCGTTCGGTCTGGTCCTGATGCCCTCTCGGTCACACG
ACGAGGTGTTCCCGCGAATATACATCGGCGAAGGGTGCGTCTGTCTTTCC
TTATTTGTCAGAGAGGTCACACCAAAGTAGAAACTACCCGACACAACAAA
GAGAAATCGTGGCAACTTCATATTTTTCCAAGTCATTCGAACGAAGAAAA
CATCGTTTCGAAATTGAATTCGCAGTTGAGCAGGCAGACATCTAATTGCT
TTGGTTTAAGAAAAATTCCAAGTAATATACAAAAGTTTTGGCACTTCATA
TGTTGCGGATCATCCGTTGATGAAGGTTAGACATCCAGGTAAAAAGATAT
GCCAAAAATAGTTACTCAAGCAACTGGATAAGCAACTGTTGTGGCTCATA
CATTGTTTTATTTCCCCTTTTAATGCAATTGAAATCGTCTTTGAAATAGG
ACATTTTATGAGAAAAGAGTGTATGTATGACTGTTTTTGCAATGTAGATA
ACTTCCATTTCTCATGATGTAGTAAGTACATGTATCCTACATTCTTGCCT
CTCACAGTGACATTGCTAAGAAGGTGGCCTGGCTGCAGGAGTTGGGCATC
ACTCATGTTGTAAACGCTGCGCACAATATCGGCGTGTTTACCGGCCCCCA
CTTCTACCGAGACACGGCCATTCAGTACCTAGGTAATGCTACGGTCACAT
TTCCAAGCCGGGGCCCGGCCGGGCTGTTTAAGAAAACAAAGAATAAAAGA
CGCATATCAAGGATATACTAGTACATAACGTATGGTAAGGAATAATTTTT
CAAAAGTTTTGTTTGTTTTGTTGTCTTTTATATGATAATTTTCGTTCCCG
CAAGCTGCCCGGCCGGGCCCCGGCTTGGAAATGTGACCCTAGCATTAGGA
CAGCATAGAGCCAAGGTGCTAGAGCGGCGGTGAACGGTTGCGGATGGACT
CTGTCCTTGGTGCTACTCCGCTATCTCCCAGAGTAGTACTTGCTATAGTG
TTCTGATATACACAGGTTTGTGTTTGAGGACACAAAAGGTCCTCAACTTT
TGGCGAATTCCGCATTGAAATGTGTGTTTTCTCGGGTGGGTATGACATAA
ATGAAATACAACACTGTTATGTGTATTCCGCATCACCCTCGGTCCCAGCC
CTCTCGCGGGTCGGATCGTACCTGCAGTCGGGCGATCCTACCCGTGGTCG
GGCTGGTACCTCGGGCGATACCGAATACCCGGTGTTGTATTCTATATATA
TTTCCTCGAAAGTGTATATGCATATTGTCACTTGTTCAAAACAAGTACTG
TGTATAGACCTCTTGGATAGTATTTTGCTTGTACCAATGGTGTCTAACTC
GTCCTTTTGTACACAATGTCTCCTTCGCGTTTGTCAAATGATTGCAGACA
AATCTGTTCTTGTAACGTTCATTTGGCGTAAACGATCCTTTTTCAGGAGT
TGAGGCAGTGGATCATGATGGTTTTGACATGATGCCGCACTTCATACAGA
CCACCGACTTCATACAGGATGCTCTTAGAGATGACACTGGTATCACACGC
CTTAGATATACTTTCAATTGACTATTGCTGCCAATTTCAAGGCTCCCGTT
GCCTACGTCTCCGTGTTTATCACACTTACTAGTATTAAACCTCTATTGTT
TGGTCCTAGCGAAAGTCCTGGTACACTGTCTGGAGGGCTTCAGTCGGTCC
GCTACCTTGGTCATAGCCTACCTGATGCTAAAGCAGGGCATGACGGTACA
GGAGGCCGTAAAGACGGTCAGGGATCGGCGTGAGGTGTGCCCAAATGACG
GATTTCTCAAGCAACTCTGCATACTGAACGACAAGCTGCTATCGTCAAGG
AGTAAACAAAAAGAATCTTAATTAGTCTGGTCGCTACAAACCTGCTTAGC
AGCCTCACTTTAAAAAAGAATTTAATACAATCTTTTACAAACTGAAGTAC
ACATTTTCTAACAAACACTGAAACATTGCATGTACACGTATGTACTTGTG
AAGTAGTCGAATTATTAATTTTATGTTATATCTGCATTTGACTGTAAGAT
ATACATAAATACTTTTGAATACCTTTGTCGAATCCA Coding sequence (CDS) from alignment at Sc0000012:3526248..3528333+ >transcript:BL97273_cuf2 ID=transcript:BL97273_cuf2|Name=transcript:BL97273_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1260bp|location=Sequence derived from alignment at Sc0000012:3526248..3528333+ (Branchiostoma lanceolatum)
ATCATCACGGGACCGTTCGGTCTGGTCCTGATGCCCTCTCGGTCACACGA
CGAGGTGTTCCCGCGAATATACATCGGCGAAGGTGACATTGCTAAGAAGG
TGGCCTGGCTGCAGGAGTTGGGCATCACTCATGTTGTAAACGCTGCGCAC
AATATCGGCGTGTTTACCGGCCCCCACTTCTACCGAGACACGGCCATTCA
GTACCTAGCGAAAGTCCTGGTACACTGTCTGGAGGGCTTCAGTCGGTCCG
CTACCTTGGTCATAGCCTACCTGATGCTAAAGCAGGGCATGACGGTACAG
GAGGCCGTAAAGACGGTCAGGGATCGGCGTGAGGTGTGCCCAAATGACGG
ATTTCTCAAGCAACTCTGCATACTGAACGACAAGCTGCTATCGTCAAGGA
GTAAACAAAAAGAATCTTAAATCATCACGGGACCGTTCGGTCTGGTCCTG
ATGCCCTCTCGGTCACACGACGAGGTGTTCCCGCGAATATACATCGGCGA
AGGTGACATTGCTAAGAAGGTGGCCTGGCTGCAGGAGTTGGGCATCACTC
ATGTTGTAAACGCTGCGCACAATATCGGCGTGTTTACCGGCCCCCACTTC
TACCGAGACACGGCCATTCAGTACCTAGCGAAAGTCCTGGTACACTGTCT
GGAGGGCTTCAGTCGGTCCGCTACCTTGGTCATAGCCTACCTGATGCTAA
AGCAGGGCATGACGGTACAGGAGGCCGTAAAGACGGTCAGGGATCGGCGT
GAGGTGTGCCCAAATGACGGATTTCTCAAGCAACTCTGCATACTGAACGA
CAAGCTGCTATCGTCAAGGAGTAAACAAAAAGAATCTTAAATCATCACGG
GACCGTTCGGTCTGGTCCTGATGCCCTCTCGGTCACACGACGAGGTGTTC
CCGCGAATATACATCGGCGAAGGTGACATTGCTAAGAAGGTGGCCTGGCT
GCAGGAGTTGGGCATCACTCATGTTGTAAACGCTGCGCACAATATCGGCG
TGTTTACCGGCCCCCACTTCTACCGAGACACGGCCATTCAGTACCTAGCG
AAAGTCCTGGTACACTGTCTGGAGGGCTTCAGTCGGTCCGCTACCTTGGT
CATAGCCTACCTGATGCTAAAGCAGGGCATGACGGTACAGGAGGCCGTAA
AGACGGTCAGGGATCGGCGTGAGGTGTGCCCAAATGACGGATTTCTCAAG
CAACTCTGCATACTGAACGACAAGCTGCTATCGTCAAGGAGTAAACAAAA
AGAATCTTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000012 | genome | Sc0000012:3526248..3528333 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97273_cuf2 |
| Biotype | protein_coding |
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