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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97270_cuf5 >transcript:BL97270_cuf5-protein ID=transcript:BL97270_cuf5-protein|Name=transcript:BL97270_cuf5|organism=Branchiostoma lanceolatum|type=polypeptide|length=153bp
ITSYGGKLRYTVDYEEDPNAPPGAENTISQQEDGPQVVIHGIDTAIILDI
PEVIAAVPARHEIDLVEFKWQLYQSLLSRTPTRAELMMILQNIQAILIKA
TYGRSMLRCKISNVSLDVGRERRSNDTGREPPTDSVEECMCPPGYTGLSC
HES Run BLAST on NCBI mRNA from alignment at Sc0000002:2057757..2059409- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97270_cuf5 ID=transcript:BL97270_cuf5|Name=transcript:BL97270_cuf5|organism=Branchiostoma lanceolatum|type=mRNA|length=1653bp|location=Sequence derived from alignment at Sc0000002:2057757..2059409- (Branchiostoma lanceolatum)
GATCACGTCCTATGGAGGTAAGCTGAGGTACACAGTGGATTATGAAGAAG
ACCCGAACGCCCCGCCCGGCGCCGAGAACACCATCAGCCAACAGGAGGAC
GGTCCGCAGGTGGTCATCCACGGCATCGACACCGCCATCATACTGGACAT
CCCAGAAGTCATCGCGGCCGTTCCCGCCAGACATGAGATCGATCTTGTGG
AGGTACTCGTTGTTAACCTTCTTTTGACAATAGATGTTGGATTAAGGAGG
CCGTATGGATGAGGGGGGATATAAACTTGGTTGCATTTGAGACAGCATTC
TTCACACTGCAGCAGTGACACATACTCATAGCTGCAGTGTAAAGTAGAAC
CAATTAGCATTGCCCTGAGGAAGGTGACAGACGGTTACCAAAACTTTGCT
CTCTCATTTTATGCATCAGAAAGGAAAATGATACAATACCTGAAAACACA
ATAACTGAAGGGTACAAACTCTAACTGAGGAGACTAAAAAAATGATGATG
GTGTAACATTGATATAAATAAATCAAGCAACTGCATAATTTGTCTAAAAT
CTACTGCTAAAAAGTCTAGATCAGTTTTTCTCACTTTTTCAGCAGCAGCT
TTCTTGTCACTGAAGGAGATTGTTTTTTCTCACAGTTTAAATGGTAGCTA
TACCAGTCCCTCCTCCATTTGCTGTTTGAGCAGTTCTTATACTGACAAAA
CACTTTTCCTCCAGTTTTATTCACATTGTCGCTAGCAGTTTTCTTGTCAC
TAATTAAAAGATTTGTTTTTTCTCTTGCAGTTTAAATGGCAGCTGTACCA
GTCCCTCCTGAGTCGTACTCCGACCCGCGCTGAACTGATGATGATCCTAC
AGAACATCCAGGCCATCCTCATCAAGGCTACGTACGGACGCAGCATGCTC
AGATGCAAGTAAGTACAGCAGGCACTGTCAGTAGTTAGATATGTAGTATA
ACTTGTAGTCTGGCTGTTTATCCCTTAACAGTTTACCAAACTCATTGTTG
AAGAAACACAATACAAAAGTTATAAAGCAACTGGATAAATTTGGAAACAT
TATCTGCTATCTTTCATTAGTGTGTGGAGATAGCAAATGCTACATGAAAC
GTCTGACCATTTACAAAACATTTCCAGTTTCTTGAGCAACTTTTTTTTAC
TGTGTATTTTCTTACCTGGATGTCTAACATATTGATGCATTGTTGAACAG
GTTTAGAGTGTTTTATTGTTGTATTCATGTAATAATGTACTGTTGAGTGG
TCTGTAACATCAGCTTGTCTGTCTGGCACTCCACTATGTATTGTCTCGTT
GCAATTTTCAATAATTTAAAAGAAAGAATTAAAGAATGAAGAAGTTTTGA
CTAATAGACTAATAAATGTTACTTTCATGGCCACAGGATCAGCAATGTCT
CTTTGGACGTTGGCCGTGAACGCCGGTCCAACGACACTGGTCGGGAGCCC
CCTACTGACAGTGTGGAGGAGTGCATGTGTCCCCCTGGGTACACTGGACT
GTCGTGCCATGTAAGTCACTCTTCTCAACTCGATAATGAATGAATGAAGA
CCTTTTTTGTGCATTTTTGCCACACTGTTCTAAGTACAGGTCACAACAAA
ACTTGTTCAAAGTTAAGATGCAAGGTACACTGGGCTGTCATGCCATGAAA
GTC Coding sequence (CDS) from alignment at Sc0000002:2057757..2059409- >transcript:BL97270_cuf5 ID=transcript:BL97270_cuf5|Name=transcript:BL97270_cuf5|organism=Branchiostoma lanceolatum|type=CDS|length=1836bp|location=Sequence derived from alignment at Sc0000002:2057757..2059409- (Branchiostoma lanceolatum)
ATCACGTCCTATGGAGGTAAGCTGAGGTACACAGTGGATTATGAAGAAGA
CCCGAACGCCCCGCCCGGCGCCGAGAACACCATCAGCCAACAGGAGGACG
GTCCGCAGGTGGTCATCCACGGCATCGACACCGCCATCATACTGGACATC
CCAGAAGTCATCGCGGCCGTTCCCGCCAGACATGAGATCGATCTTGTGGA
GTTTAAATGGCAGCTGTACCAGTCCCTCCTGAGTCGTACTCCGACCCGCG
CTGAACTGATGATGATCCTACAGAACATCCAGGCCATCCTCATCAAGGCT
ACGTACGGACGCAGCATGCTCAGATGCAAGATCAGCAATGTCTCTTTGGA
CGTTGGCCGTGAACGCCGGTCCAACGACACTGGTCGGGAGCCCCCTACTG
ACAGTGTGGAGGAGTGCATGTGTCCCCCTGGGTACACTGGGCTGTCATGC
CATGAAAGTATCACGTCCTATGGAGGTAAGCTGAGGTACACAGTGGATTA
TGAAGAAGACCCGAACGCCCCGCCCGGCGCCGAGAACACCATCAGCCAAC
AGGAGGACGGTCCGCAGGTGGTCATCCACGGCATCGACACCGCCATCATA
CTGGACATCCCAGAAGTCATCGCGGCCGTTCCCGCCAGACATGAGATCGA
TCTTGTGGAGTTTAAATGGCAGCTGTACCAGTCCCTCCTGAGTCGTACTC
CGACCCGCGCTGAACTGATGATGATCCTACAGAACATCCAGGCCATCCTC
ATCAAGGCTACGTACGGACGCAGCATGCTCAGATGCAAGATCAGCAATGT
CTCTTTGGACGTTGGCCGTGAACGCCGGTCCAACGACACTGGTCGGGAGC
CCCCTACTGACAGTGTGGAGGAGTGCATGTGTCCCCCTGGGTACACTGGG
CTGTCATGCCATGAAAGTATCACGTCCTATGGAGGTAAGCTGAGGTACAC
AGTGGATTATGAAGAAGACCCGAACGCCCCGCCCGGCGCCGAGAACACCA
TCAGCCAACAGGAGGACGGTCCGCAGGTGGTCATCCACGGCATCGACACC
GCCATCATACTGGACATCCCAGAAGTCATCGCGGCCGTTCCCGCCAGACA
TGAGATCGATCTTGTGGAGTTTAAATGGCAGCTGTACCAGTCCCTCCTGA
GTCGTACTCCGACCCGCGCTGAACTGATGATGATCCTACAGAACATCCAG
GCCATCCTCATCAAGGCTACGTACGGACGCAGCATGCTCAGATGCAAGAT
CAGCAATGTCTCTTTGGACGTTGGCCGTGAACGCCGGTCCAACGACACTG
GTCGGGAGCCCCCTACTGACAGTGTGGAGGAGTGCATGTGTCCCCCTGGG
TACACTGGGCTGTCATGCCATGAAAGTATCACGTCCTATGGAGGTAAGCT
GAGGTACACAGTGGATTATGAAGAAGACCCGAACGCCCCGCCCGGCGCCG
AGAACACCATCAGCCAACAGGAGGACGGTCCGCAGGTGGTCATCCACGGC
ATCGACACCGCCATCATACTGGACATCCCAGAAGTCATCGCGGCCGTTCC
CGCCAGACATGAGATCGATCTTGTGGAGTTTAAATGGCAGCTGTACCAGT
CCCTCCTGAGTCGTACTCCGACCCGCGCTGAACTGATGATGATCCTACAG
AACATCCAGGCCATCCTCATCAAGGCTACGTACGGACGCAGCATGCTCAG
ATGCAAGATCAGCAATGTCTCTTTGGACGTTGGCCGTGAACGCCGGTCCA
ACGACACTGGTCGGGAGCCCCCTACTGACAGTGTGGAGGAGTGCATGTGT
CCCCCTGGGTACACTGGGCTGTCATGCCATGAAAGT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000002 | genome | Sc0000002:2057757..2059409 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97270_cuf5 |
| Biotype | protein_coding |
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