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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97261_cuf3 >transcript:BL97261_cuf3-protein ID=transcript:BL97261_cuf3-protein|Name=transcript:BL97261_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=167bp
VQHNETDGCSSSPCQNGASCCEDPEGGWYCDCPLGYEEPDCATFNDPCAG ENPCMHGGTCQFDSTMPDYAYCQCPHGFTGQVCETTVPTDCTLDECQNGA TCQMDSWGVWCVCPDGFTGPYCEFLFGDCQEDSCEQGDCHPVGCEGYHTC ECEEGYSGSFCETSGSG Run BLAST on NCBI mRNA from alignment at Sc0000002:8105035..8107828+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97261_cuf3 ID=transcript:BL97261_cuf3|Name=transcript:BL97261_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=2794bp|location=Sequence derived from alignment at Sc0000002:8105035..8107828+ (Branchiostoma lanceolatum) GTGCAGCACAATGAGACCGGTGAGTACATACCTCTTAATTTCGTATCTGT
GATCTTTCAATTACTGCGATATATTTTAATTCATATTGAACTTAAACTTG
TCTGTTCTCATACCTCCATCTATTCTTAATCTTGAATTGCTAACTATTTG
TCATATCAAGTTACTGTTAACAAACGGCAAATTGGAGGAAGATACAGTGA
TTTTCAGCTCTTCAGCACGCTAACCACCACCCCTCGCCCTCTCCGCAGAT
GGTTGCAGCAGCTCGCCCTGTCAAAACGGCGCTTCCTGCTGCGAGGATCC
CGAAGGAGGCTGGTACTGTGACTGTCCGCTGGGGTACGAAGGACCTGACT
GTGCCACCTTTAACGACCCCTGCGCTGGAGAGAACCCCTGCATGCACGGG
GGCACCTGTCAGTTCGACAGTACCATGCCTGACTACGCCTACTGCCATTG
TCCACATGGATTCACAGGTAGGAATATCACTTAAGGCTGATATACATTGC
TTATCTTTTGGACAGAAACAGATGAAAATGCTTGAAAAAAATATCACTTT
TTAGTTCTGGCATGTTTTTGTATTGCTCTCCTTTTTTGACATACCGAGTT
CGAGTGACCTTCAAGGCAAAAGGGAAAAGATGATCTGTGGCATATTGAAC
TATCTATAAACAAAAAGAACAGCCCCTTCCAGCCTAGTATACCTTTTTGT
TCTACTAATAGGTTTTTGGCCCATAACCGAGAGATCTTGGATTAGAACCC
CTATAGGCCTAGCATTCCACCGATGCTGTGTCATCGGGAAAGGTACCGAT
TTCCTCACTAGACCCAGGTGAAAAAAATGGATACCTGACTTCGGTTGGGG
ATGTAAAAGGCCGCGGAAGGAGAGGATTGGGCAACAAATTCGGATAACAA
CCCACTGCCCCTAAAGCCTCAATATGCTATGGGACTACGTTTACGTACAT
ACTTACTGATGGTAAAAAAATGTTTGCCCGAATTAGGTAAAGTGTGTGAG
ACCACCGTACCCACCGACTGTACTTTGGGCGAGTGTCAGAACGGGGCAAC
CTGTCAGATGGACTCCTGGGGAAGTGGAGACGTCTGGTGTGTCTGCCCGG
AGGGATTCACGGGGCCGTACTGCGAGTTTCTGTTCGGAGACTGCCAAGAA
GACAGCTGTGAGCAGGGAGACTGTCACCCGGTGGGCTGTGAGGGATACCA
CACGTGCGAGTGTGAGGAAGGTATGTACCATGTATCAGGTCGATACAATA
GTGTTTTTACACCGCTGGTGTTTTTCTTTGTTATTTTTTTGCGCGCTCTC
CTATTGTTCCTGTCTGAATATTTTCCAGGGCTCCTGATCTCCAGACAGAC
ACTTACTACAGGCAAGCTAAATTTGCTGGACGTTCATTGCTTACAGAATC
TAATCCAAGTATGGTAATTTTTGTAGGTTATTCGGGGACATTCTGCGAGG
TGCACGATGATAGTCACTACAACGATACCGGTGAGTACATATACCTGCTT
TCTTAATATCTGTGATATTTTCAAAACCAGAAAAGATTGATTTTTAGCTC
TCCAGCATCCCAACAACCCATTCCCTTTATCCATCCGCAGATGGGTGCAG
CAGCTCGCCCTGTCAAAACGGCGCTTCCTGCTGCGAGGATCCCGAAGGAG
GCTGGTACTGTGACTGTCCGCTGGGGTACGAGGAACCGGACTGTGCCACC
TTTAACGACCCCTGCGCTGGAGAGAACCCCTGCATGCACGGGGGCACCTG
TCAGTTCGACAGTACCATGCCTGACTACGCCTACTGCCAGTGTCCACATG
GATTCACAGGTAGGAACATCACTTAAGGCTGATATACATTGCTTATCTTT
TGGACAGAAACAGATGAAAATGGTTGAAAAAGATATCACTTTTTAGTTCT
GGCATGTTTTTGTATTGCTCTCCTTTTTTTGACATACCGAGTTCGAGTGA
CCTTCAAGGCAAGAGGGAAAAGATGATCTGTGGCATATTGAACTATCTAT
AAACAAAAAGAACAGCCCCTTCCAGCCTAGTATACCTTTTTGTTCTACTA
ATAGGTTTTAGGCCCAGAACCGGGAGATCTTGGATAAGAACCCCTATAGG
CCTAGCATTCCACCGATGCTATGTCATCGGGAAAGGTACCGATTTCCTCA
CTAGACCCAGGTGAAAAAAAATGGATACCTGACTTCAGTTGGGGATGTAA
AAGGCTGCAGAAGGAGAGGATTGGGCTCCAACTTCGGATAACAACCCACT
GCCCCTAAAGCCTCAATATGCTATGGGACTACGTTTACCTACCTACTTAC
TGATGGAATAAACATGTTTGTCTGATTTAGGTCAAGTGTGTGAGACCACC
GTACCCACCGACTGTACTTTGGACGAATGTCAGAACGGGGCAACCTGTCA
GATGGACTCGTGGGGAGTCTGGTGTGTTTGCCCGGACGGTTTCACGGGGC
CCTACTGCGAGTTTCTGTTCGGGGACTGCCAAGAAGACAGCTGTGAGCAG
GGAGACTGTCACCCGGTGGGCTGTGAGGGATATCACACCTGCGAGTGTGA
GGAAGGTATGTACCATGTACCATGTCGATACAATAGTGTTTTTCGACCGC
TGGTGTTTTTCTATGTTAAACTTTTTGCACGCTCTCCTGATGTTCCTGTC
TGAATATTTTCCAGGGCTCCTTATCTCCAGACAGACACTTACTACAGGCA
AGCTAAATTTGCTGGGCATTCGTTGAATCTAATCCAAGTATGGCAATTTT
TGCAGGTTATTCGGGATCATTCTGCGAGACAAGCGGTTCCGGGT Coding sequence (CDS) from alignment at Sc0000002:8105035..8107828+ >transcript:BL97261_cuf3 ID=transcript:BL97261_cuf3|Name=transcript:BL97261_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=2004bp|location=Sequence derived from alignment at Sc0000002:8105035..8107828+ (Branchiostoma lanceolatum) GTGCAGCACAATGAGACCGATGGGTGCAGCAGCTCGCCCTGTCAAAACGG CGCTTCCTGCTGCGAGGATCCCGAAGGAGGCTGGTACTGTGACTGTCCGC TGGGGTACGAGGAACCGGACTGTGCCACCTTTAACGACCCCTGCGCTGGA GAGAACCCCTGCATGCACGGGGGCACCTGTCAGTTCGACAGTACCATGCC TGACTACGCCTACTGCCAGTGTCCACATGGATTCACAGGTCAAGTGTGTG AGACCACCGTACCCACCGACTGTACTTTGGACGAATGTCAGAACGGGGCA ACCTGTCAGATGGACTCGTGGGGAGTCTGGTGTGTTTGCCCGGACGGTTT CACGGGGCCCTACTGCGAGTTTCTGTTCGGGGACTGCCAAGAAGACAGCT GTGAGCAGGGAGACTGTCACCCGGTGGGCTGTGAGGGATATCACACCTGC GAGTGTGAGGAAGGTTATTCGGGATCATTCTGCGAGACAAGCGGTTCCGG GGTGCAGCACAATGAGACCGATGGGTGCAGCAGCTCGCCCTGTCAAAACG GCGCTTCCTGCTGCGAGGATCCCGAAGGAGGCTGGTACTGTGACTGTCCG CTGGGGTACGAGGAACCGGACTGTGCCACCTTTAACGACCCCTGCGCTGG AGAGAACCCCTGCATGCACGGGGGCACCTGTCAGTTCGACAGTACCATGC CTGACTACGCCTACTGCCAGTGTCCACATGGATTCACAGGTCAAGTGTGT GAGACCACCGTACCCACCGACTGTACTTTGGACGAATGTCAGAACGGGGC AACCTGTCAGATGGACTCGTGGGGAGTCTGGTGTGTTTGCCCGGACGGTT TCACGGGGCCCTACTGCGAGTTTCTGTTCGGGGACTGCCAAGAAGACAGC TGTGAGCAGGGAGACTGTCACCCGGTGGGCTGTGAGGGATATCACACCTG CGAGTGTGAGGAAGGTTATTCGGGATCATTCTGCGAGACAAGCGGTTCCG GGGTGCAGCACAATGAGACCGATGGGTGCAGCAGCTCGCCCTGTCAAAAC GGCGCTTCCTGCTGCGAGGATCCCGAAGGAGGCTGGTACTGTGACTGTCC GCTGGGGTACGAGGAACCGGACTGTGCCACCTTTAACGACCCCTGCGCTG GAGAGAACCCCTGCATGCACGGGGGCACCTGTCAGTTCGACAGTACCATG CCTGACTACGCCTACTGCCAGTGTCCACATGGATTCACAGGTCAAGTGTG TGAGACCACCGTACCCACCGACTGTACTTTGGACGAATGTCAGAACGGGG CAACCTGTCAGATGGACTCGTGGGGAGTCTGGTGTGTTTGCCCGGACGGT TTCACGGGGCCCTACTGCGAGTTTCTGTTCGGGGACTGCCAAGAAGACAG CTGTGAGCAGGGAGACTGTCACCCGGTGGGCTGTGAGGGATATCACACCT GCGAGTGTGAGGAAGGTTATTCGGGATCATTCTGCGAGACAAGCGGTTCC GGGGTGCAGCACAATGAGACCGATGGGTGCAGCAGCTCGCCCTGTCAAAA CGGCGCTTCCTGCTGCGAGGATCCCGAAGGAGGCTGGTACTGTGACTGTC CGCTGGGGTACGAGGAACCGGACTGTGCCACCTTTAACGACCCCTGCGCT GGAGAGAACCCCTGCATGCACGGGGGCACCTGTCAGTTCGACAGTACCAT GCCTGACTACGCCTACTGCCAGTGTCCACATGGATTCACAGGTCAAGTGT GTGAGACCACCGTACCCACCGACTGTACTTTGGACGAATGTCAGAACGGG GCAACCTGTCAGATGGACTCGTGGGGAGTCTGGTGTGTTTGCCCGGACGG TTTCACGGGGCCCTACTGCGAGTTTCTGTTCGGGGACTGCCAAGAAGACA GCTGTGAGCAGGGAGACTGTCACCCGGTGGGCTGTGAGGGATATCACACC TGCGAGTGTGAGGAAGGTTATTCGGGATCATTCTGCGAGACAAGCGGTTC CGGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000002 | genome | Sc0000002:8105035..8107828 + |
Properties
Property Name | Value |
Transcript id | BL97261_cuf3 |
Biotype | protein_coding |
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