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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97242_cuf0 >transcript:BL97242_cuf0-protein ID=transcript:BL97242_cuf0-protein|Name=transcript:BL97242_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=223bp
LLKQNCNFDVPGDLCGYIQSQGDDFDWTQDTGATPTSFTGPTDDVTAGQT
GTAGYYMYIETSSPQSRGDKAQLLTPLLEPTAERCLTFYYHMYGTSVGTL
NVYKISRGQRPQLWTQSGAQGNQWNYAEIDYDSKYQYQFEFEGVISGSYG
DIGLDHIIMKNGPCSGSNAQCGSPLGMEDGSIPDGSISASTSKPGNPASA
GRLNSNGYWSPQDSDQDPWIQVK Run BLAST on NCBI mRNA from alignment at Sc0000002:8244443..8246385+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97242_cuf0 ID=transcript:BL97242_cuf0|Name=transcript:BL97242_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=1943bp|location=Sequence derived from alignment at Sc0000002:8244443..8246385+ (Branchiostoma lanceolatum)
TTACTGAAACAGAACTGTAATTTTGACGTGCCCGGGGACCTATGCGGGTA
CATCCAGTCCCAGGGGGACGACTTCGACTGGACACAGGACACCGGGGCTA
CCCCCACATCCTTCACCGGACCCACAGATGACGTCACGGCGGGACAAACT
GGTACTGCAGGTAAAGCAAATACATTTTTATATATTTTTGTCATTCTAGG
TTTCTTATCAGGGTCTATTACCTATTACCTCGACCAAGAAGTGGGTGAGT
GAGAGCATGTGTGAGGGTGGGTGTTCGTCAGAACTCGAGAAGTTGTGAAT
AGATGTTTATGTTTTTTGGCAAGTAAGTGTTGGCAAACCAAAGGACAAGT
TCCTTTATATTATGGGCCCCCAACTGACTTTCATTGGTACTGTAAGAGAA
CATAGGTTTGGTATCCCGTGTTCGGCTCGTAAAGAAGTGATATAGAATCT
ATTCACCCTTATGTGGACGCCCTCGTTTACACGGGTTTATGTCTATTTCG
AAACATAGACAGCAGAATAACTTGCACCCTTTTTAACGCTATAGGTTATT
ACATGTACATCGAGACATCATCACCCCAGAGTCGAGGCGACAAGGCCCAG
TTGCTGACGCCGCTGCTGGAGCCCACGGCGGAGAGATGTCTCACGTTCTA
CTACCACATGTACGGGACGTCTGTCGGCACGTTGAACGTGTACAAGATTT
CCAGAGGACAGCGACCCCAGCTGTGGACCCAGTCGGGAGCCCAGGGGAAC
CAGTGGAACTATGCGGAGATCGATTATGACAGCAAGTACCAATACCAGGT
TTGTGTTATATACTTTTGTATTTTTTTTTTCTTTCTGTTCAGTATTTGAC
GGTTATGGTAATTTGTACCTCTGTCCTCTTGCCATGTGTATTTCGTTTGT
TCTGTACTTTCTTTAGGTGTCTTTCGAGCTCACAAGGACTGGGCGCTAAA
AAGCGCAAGCCAATAAAGCCTCGTTCACTCACTCACTCACTCACTCGCTC
ATTCGAATTCATTTCTTATTCATTCATTCATTCATTCATCTTTTTTATAT
CAAAAATATGAAGAAAACAAATTTTGAAAAACAAGAGACTTATGTTACCA
ACTAATGATTTCAATTTATTTCAACATGCAGTTTGAATTTGAAGGGGTGA
TATCTGGTAGTTACGGTGACATCGGGCTTGATCACATCATCATGAAGAAT
GGACCATGTAGCGGCAGTAACGGTAAGCTATGTTTTGACAGTATTACTAG
TGCTAAGTACATTTTCCTGTAACACTCGGCGACATAGTCTTTTGCATGCT
GCCTTATAACGACTTCGACACCTTGAATTCCAGATGTCACATAAGGACAC
TTCGTTTGGATTTCTAAGACAACACTGTGTGTTGACCCTAACATCATTAA
CAGTTCATTAATAACTACGTACAATTAAGAACATCTACTGTTATAAATGT
GACGAAGGCTTAATTGAGAAGAGCTAACAAGTTAATGAATCAAATATTTA
TTCTGCAATTACTTAATATATAGTACAGTAATAGCTTTTTTCCACTAACT
GCAAAACTCTGGAATTCCCTCCCAGCCCACTGCTTTCCCCCCGAATACAA
CCTACAAACCTTCAAAACAAACACACACCGCTGTCTCTCACCTATGCCAC
ATTAGTTCAATTAGTTCAATGCCGACAAGCGGCCTCTTACGGTCTTGCAT
TGAGCGAGATCGTTAAAAACAAGAAAAAAACCCGTTAACCATATAATGAT
CCGGACAATTTTTCCTACTCTAATATAGCTCAATGTGGCAGTCCTCTCGG
CATGGAGGACGGCTCCATCCCGGACGGGTCCATCTCTGCGTCCACGTCCA
AACCGGGCAACCCAGCTTCGGCCGGACGCCTCAACTCCAACGGCTACTGG
TCACCGCAGGACAGCGATCAGGATCCGTGGATTCAGGTAAAGC Coding sequence (CDS) from alignment at Sc0000002:8244443..8246385+ >transcript:BL97242_cuf0 ID=transcript:BL97242_cuf0|Name=transcript:BL97242_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2676bp|location=Sequence derived from alignment at Sc0000002:8244443..8246385+ (Branchiostoma lanceolatum)
TTACTGAAACAGAACTGTAATTTTGACGTGCCCGGGGACCTATGCGGGTA
CATCCAGTCCCAGGGGGACGACTTCGACTGGACACAGGACACCGGGGCTA
CCCCCACATCCTTCACCGGACCCACAGATGACGTCACGGCGGGACAAACT
GGTACTGCAGGTTATTACATGTACATCGAGACATCATCACCCCAGAGTCG
AGGCGACAAGGCCCAGTTGCTGACGCCGCTGCTGGAGCCCACGGCGGAGA
GATGTCTCACGTTCTACTACCACATGTACGGGACGTCTGTCGGCACGTTG
AACGTGTACAAGATTTCCAGAGGACAGCGACCCCAGCTGTGGACCCAGTC
GGGAGCCCAGGGGAACCAGTGGAACTATGCGGAGATCGATTATGACAGCA
AGTACCAATACCAGTTTGAATTTGAAGGGGTGATATCTGGTAGTTACGGT
GACATCGGGCTTGATCACATCATCATGAAGAATGGACCATGTAGCGGCAG
TAACGCTCAATGTGGCAGTCCTCTCGGCATGGAGGACGGCTCCATCCCGG
ACGGGTCCATCTCTGCGTCCACGTCCAAACCGGGCAACCCAGCTTCGGCC
GGACGCCTCAACTCCAACGGCTACTGGTCACCGCAGGACAGCGATCAGGA
TCCGTGGATTCAGGTAAAGTTACTGAAACAGAACTGTAATTTTGACGTGC
CCGGGGACCTATGCGGGTACATCCAGTCCCAGGGGGACGACTTCGACTGG
ACACAGGACACCGGGGCTACCCCCACATCCTTCACCGGACCCACAGATGA
CGTCACGGCGGGACAAACTGGTACTGCAGGTTATTACATGTACATCGAGA
CATCATCACCCCAGAGTCGAGGCGACAAGGCCCAGTTGCTGACGCCGCTG
CTGGAGCCCACGGCGGAGAGATGTCTCACGTTCTACTACCACATGTACGG
GACGTCTGTCGGCACGTTGAACGTGTACAAGATTTCCAGAGGACAGCGAC
CCCAGCTGTGGACCCAGTCGGGAGCCCAGGGGAACCAGTGGAACTATGCG
GAGATCGATTATGACAGCAAGTACCAATACCAGTTTGAATTTGAAGGGGT
GATATCTGGTAGTTACGGTGACATCGGGCTTGATCACATCATCATGAAGA
ATGGACCATGTAGCGGCAGTAACGCTCAATGTGGCAGTCCTCTCGGCATG
GAGGACGGCTCCATCCCGGACGGGTCCATCTCTGCGTCCACGTCCAAACC
GGGCAACCCAGCTTCGGCCGGACGCCTCAACTCCAACGGCTACTGGTCAC
CGCAGGACAGCGATCAGGATCCGTGGATTCAGGTAAAGTTACTGAAACAG
AACTGTAATTTTGACGTGCCCGGGGACCTATGCGGGTACATCCAGTCCCA
GGGGGACGACTTCGACTGGACACAGGACACCGGGGCTACCCCCACATCCT
TCACCGGACCCACAGATGACGTCACGGCGGGACAAACTGGTACTGCAGGT
TATTACATGTACATCGAGACATCATCACCCCAGAGTCGAGGCGACAAGGC
CCAGTTGCTGACGCCGCTGCTGGAGCCCACGGCGGAGAGATGTCTCACGT
TCTACTACCACATGTACGGGACGTCTGTCGGCACGTTGAACGTGTACAAG
ATTTCCAGAGGACAGCGACCCCAGCTGTGGACCCAGTCGGGAGCCCAGGG
GAACCAGTGGAACTATGCGGAGATCGATTATGACAGCAAGTACCAATACC
AGTTTGAATTTGAAGGGGTGATATCTGGTAGTTACGGTGACATCGGGCTT
GATCACATCATCATGAAGAATGGACCATGTAGCGGCAGTAACGCTCAATG
TGGCAGTCCTCTCGGCATGGAGGACGGCTCCATCCCGGACGGGTCCATCT
CTGCGTCCACGTCCAAACCGGGCAACCCAGCTTCGGCCGGACGCCTCAAC
TCCAACGGCTACTGGTCACCGCAGGACAGCGATCAGGATCCGTGGATTCA
GGTAAAGTTACTGAAACAGAACTGTAATTTTGACGTGCCCGGGGACCTAT
GCGGGTACATCCAGTCCCAGGGGGACGACTTCGACTGGACACAGGACACC
GGGGCTACCCCCACATCCTTCACCGGACCCACAGATGACGTCACGGCGGG
ACAAACTGGTACTGCAGGTTATTACATGTACATCGAGACATCATCACCCC
AGAGTCGAGGCGACAAGGCCCAGTTGCTGACGCCGCTGCTGGAGCCCACG
GCGGAGAGATGTCTCACGTTCTACTACCACATGTACGGGACGTCTGTCGG
CACGTTGAACGTGTACAAGATTTCCAGAGGACAGCGACCCCAGCTGTGGA
CCCAGTCGGGAGCCCAGGGGAACCAGTGGAACTATGCGGAGATCGATTAT
GACAGCAAGTACCAATACCAGTTTGAATTTGAAGGGGTGATATCTGGTAG
TTACGGTGACATCGGGCTTGATCACATCATCATGAAGAATGGACCATGTA
GCGGCAGTAACGCTCAATGTGGCAGTCCTCTCGGCATGGAGGACGGCTCC
ATCCCGGACGGGTCCATCTCTGCGTCCACGTCCAAACCGGGCAACCCAGC
TTCGGCCGGACGCCTCAACTCCAACGGCTACTGGTCACCGCAGGACAGCG
ATCAGGATCCGTGGATTCAGGTAAAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000002 | genome | Sc0000002:8244443..8246385 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97242_cuf0 |
| Biotype | protein_coding |
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