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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97225_cuf1 >transcript:BL97225_cuf1-protein ID=transcript:BL97225_cuf1-protein|Name=transcript:BL97225_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=192bp
ELCEEGYFGDATKGTPEDCKPMKQCQCHGHSNRCDSTGVCKNCRHNTMGQ MCERCRPGYVGNPRQQTPRDCSPLFPGCNCHGHSLTCDALGKCTFCAHNT VGDRCQKCLPGYVGDARRGTPTDCQQYRPTTPCVCNGHSKQCDQSGTCVN CQHNTEGARCERCKSGYHGDATRGTADDCQSVRQQCFCHGHS Run BLAST on NCBI mRNA from alignment at Sc0000303:118222..124471+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97225_cuf1 ID=transcript:BL97225_cuf1|Name=transcript:BL97225_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=6250bp|location=Sequence derived from alignment at Sc0000303:118222..124471+ (Branchiostoma lanceolatum) GTGAGCTGTGTGAGGAGGGGTACTTCGGAGACGCCACGAAAGGGACCCCT
GAGGACTGCAAACCCATGAAACAGTGTCAGTGCCATGGCCACTCCAACAG
ATGCGACAGTACTGGAGTTTGTAAGGTAAACTTCTAACTAGAANCCCATT
AAGCCCCCGTCACAAATCAAGAATTTCGCTCGGCCGACTTGTCGGCGAGC
TCCAAATGGCGATTTTCGGCCGAAGTACGACCGACGTCCTGGCGATTCTG
CGAGCTTCGGGCGATTTTTCGGAGCTCGGCCGACGTTCGCGGGTCACTGG
AAGCTGCGCTTAAATTCAGCGAGGCCTCGGCGACGATTTTTGAACTCGCA
CAGCTCGTCAACAGTTTGCCCGTAGCTCGCCCGAGCAACGCCCAGCGCTC
GGCCAATATTCGGGCGGGCATCCGAGGATTTTAGACCCGATTTTTGGTCG
GTCGGAGGTCGCCCGANCGGCCTCGTGCGAGCCTCGCACGGGCTTTGTAC
AATAATCGGACGACGGTTAGCCTGTATTACACAAGCTCTCGGCCGGAGGT
TTATTGCCCCCCACCCAAGGGTGGGGGGCAATAAACCTCCGGCCGAGAGC
TTGTGTAATACAGGCTAGACGACGGTCGTCAGTGTTCCGGCCGACTCATG
AAAAATAAGGCGTGCTTCGGGCGAGCGTTGTACAAGTATCGATGGGCGCT
TGGACGGGCTCCGGCCGAACTCCTTCTTGTTTATATNNNNNNNNNNNNNN
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NNNNNNNNNNNNNATTTGGATTGGTCTATAACAAAATTCCTGTCTATAGT
ATTATTTTCAGTGTGGCCGTCCACTTCACTCATGCCCTACAGATTTGCCA
CAACTCAGAAAGTAAAGTTGGTCCAAGTATGCGCTTGTTACCAGGTCAGT
TGATTCTGACTTCGTCCGTGTCCAAGAGATGGTACCGTCTCATGAGGTAT
TTATGATTATTAGTGTTTGACGGACGTCGCCCGAGCTCCGTTCAATTTGT
GACGGGGCAGGTTTTCAGCGAAAAATACGGTCGAAGCTCGGGCGATTGTG
AAATTCGGCGAGCTTCCGGCGATCTACAAAATCGGCCGATGCTCGCATGA
ATTGTGACGCCGGCTTTAGGGAAGACAAAAAGATGACGTTGTTGGACTAT
GAGGTGACATTTTCTTGATCTGTTCTTCAAGTATGATGTTTTAGTGTCAG
GTAAATAGATCACTGTTACATAGTACGTCTCTTGAGGACTTTCTGAGTGT
CTTTTTAACATTAGATGGAAATTGTGTCCGGGGACTTACGAGGGTGAGAC
AATACGTCATGCAATTTCTCTGATAACAGGCCAAGTTTTTTTTCCATCAA
AAACGCGTTGAAATCTAACACAAAGGTGAAGGTTGATATTTTCTTGAGAC
TGAAACATCTCAATTTATTGCTCAGATTTTCATGAGCGACTGAGTTGATT
TTAGAATGACAGCAACCTTATTGACTCACCCTCATACCATCTACAATAGA
ACTGCAGGCATAACACCATGGGGCAGATGTGCGAGCGGTGCAGGCCGGGA
TACGTGGGGAACCCCAGACAGCAGACACCCAGAGACTGCAGCCCGCTCTT
CCCAGGATGCAACTGTCACGGCCACTCCCTGACCTGCGACGCGTTGGGCA
AGTGCACGGTAAGGCCTAGAAAATAAGTAAGGTTGTGCTGTTGATCCTAT
AAGGCCTAGCCTTTTTTGTCACGATCAGACGCTTGCGAGGGACTTTATAT
TTCATATTTCATAATATTTCATCTGACATTTAAGTGACGAAATTTAAAAC
AGACCTCCTGTATTTCACACTCTGTTAACAGAAGAGGGCGGCTTTGACAG
TTGATGTAAGAATAAATATTAATCTTAACCGGAAACGCAACATCCATTCC
TCGACCTAAGCATCAACATTTTTAAGTGGTGTTTCTTCTTTCTTTGATTT
GCTTCTCCTTTTTCGGAAAGTCTACACTACTGTTTGGAAGTAAAGATATG
GTACAGTACACTGTATAAGTTTATTGCAAGTTCTTGCCCGCAGGCTAATT
GCAAGTTCATAAAACATGGAAGGACTGACAGACAATTGGTAACAATATAG
CATGTGACTATTCTAGTTCAAATACTAACACTAAATTCTATATTATTTGG
GTTTGACTTCTCTTTTCGAGACAGTGGAAGACGAATGCTCCCACATTTTC
TGAAATGTGTGGGTTTTGTGATGTTAACAGGAGAGTAGTTCTCTTTTGGT
ATGTAAACTGAATGTTAACTCTGAATTCTAGACGACGCCCTAGCATACTC
GTATACAAGGCACTTTAACTTTATACAAAATATTCCATGTGTCTTTTTGG
TAGTTCTGCGCACACAACACCGTCGGTGACCGGTGTCAGAAGTGCCTGCC
GGGGTACGTGGGAGACGCGCGGCGCGGTACACCCACCGACTGTCAGCAGT
ACAGACCGACCACGCCCTGCGTGTGCAACGGACACTCCAAACAATGCGAC
CAGTCTGGCACCTGCGTGGTACGCGTATGTACATTTTTACAGGTTTGCGA
TAGCAGAGCCTATATTGGTTTAGGTCCCGTCCTTTAGAGGCCGCCATTTC
CAAACTGTACAGAAAATATGTATGCTCGTTAATGGAAGACCAGCTGTCAG
CCAATCAGAGATTCAGCTTTGCGTATATAAAACATATAGGCGATGCTCTG
ATTGGTTAACAGCAGGTAGGAAGCCACGTTCACAAAAATGGAAACCTCAG
CCCGGGTTAACAGAGCATCTCCAAGGCATATGCACAGTAGGCTTTGCTAA
GGAGGAGAATAGTTAAGTTGTATTGCGTAGATTTAGCCAATGGCTTATCA
AGGAAAGCAGTTTGTCAAAATTCAAGCGAACGACCATATTTAATGAAAGT
CCTTTTTAATTTTTTTTCAAGAACTGTCAACACAACACGGAGGGCGCGCG
CTGTGAGCGGTGCAAGTCCGGTTACCATGGCGACGCCACTAGGGGAACTG
CAGACGACTGTCAGTCCGTCAGACAGCAGTGTTTCTGTCACGGGCACTCC
Coding sequence (CDS) from alignment at Sc0000303:118222..124471+ >transcript:BL97225_cuf1 ID=transcript:BL97225_cuf1|Name=transcript:BL97225_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=2304bp|location=Sequence derived from alignment at Sc0000303:118222..124471+ (Branchiostoma lanceolatum) GAGCTGTGTGAGGAGGGGTACTTCGGAGACGCCACGAAAGGGACCCCTGA GGACTGCAAACCCATGAAACAGTGTCAGTGCCATGGCCACTCCAACAGAT GCGACAGTACTGGAGTTTGTAAGAACTGCAGGCATAACACCATGGGGCAG ATGTGCGAGCGGTGCAGGCCGGGATACGTGGGGAACCCCAGACAGCAGAC ACCCAGAGACTGCAGCCCGCTCTTCCCAGGATGCAACTGTCACGGCCACT CCCTGACCTGCGACGCGTTGGGCAAGTGCACGTTCTGCGCACACAACACC GTCGGTGACCGGTGTCAGAAGTGCCTGCCGGGGTACGTGGGAGACGCGCG GCGCGGTACACCCACCGACTGTCAGCAGTACAGACCGACCACGCCCTGCG TGTGCAACGGACACTCCAAACAATGCGACCAGTCTGGCACCTGCGTGAAC TGTCAACACAACACGGAGGGCGCGCGCTGTGAGCGGTGCAAGTCCGGTTA CCATGGCGACGCCACTAGGGGAACTGCAGACGACTGTCAGTCCGTCAGAC AGCAGTGTTTCTGTCACGGGCACTCCGAGCTGTGTGAGGAGGGGTACTTC GGAGACGCCACGAAAGGGACCCCTGAGGACTGCAAACCCATGAAACAGTG TCAGTGCCATGGCCACTCCAACAGATGCGACAGTACTGGAGTTTGTAAGA ACTGCAGGCATAACACCATGGGGCAGATGTGCGAGCGGTGCAGGCCGGGA TACGTGGGGAACCCCAGACAGCAGACACCCAGAGACTGCAGCCCGCTCTT CCCAGGATGCAACTGTCACGGCCACTCCCTGACCTGCGACGCGTTGGGCA AGTGCACGTTCTGCGCACACAACACCGTCGGTGACCGGTGTCAGAAGTGC CTGCCGGGGTACGTGGGAGACGCGCGGCGCGGTACACCCACCGACTGTCA GCAGTACAGACCGACCACGCCCTGCGTGTGCAACGGACACTCCAAACAAT GCGACCAGTCTGGCACCTGCGTGAACTGTCAACACAACACGGAGGGCGCG CGCTGTGAGCGGTGCAAGTCCGGTTACCATGGCGACGCCACTAGGGGAAC TGCAGACGACTGTCAGTCCGTCAGACAGCAGTGTTTCTGTCACGGGCACT CCGAGCTGTGTGAGGAGGGGTACTTCGGAGACGCCACGAAAGGGACCCCT GAGGACTGCAAACCCATGAAACAGTGTCAGTGCCATGGCCACTCCAACAG ATGCGACAGTACTGGAGTTTGTAAGAACTGCAGGCATAACACCATGGGGC AGATGTGCGAGCGGTGCAGGCCGGGATACGTGGGGAACCCCAGACAGCAG ACACCCAGAGACTGCAGCCCGCTCTTCCCAGGATGCAACTGTCACGGCCA CTCCCTGACCTGCGACGCGTTGGGCAAGTGCACGTTCTGCGCACACAACA CCGTCGGTGACCGGTGTCAGAAGTGCCTGCCGGGGTACGTGGGAGACGCG CGGCGCGGTACACCCACCGACTGTCAGCAGTACAGACCGACCACGCCCTG CGTGTGCAACGGACACTCCAAACAATGCGACCAGTCTGGCACCTGCGTGA ACTGTCAACACAACACGGAGGGCGCGCGCTGTGAGCGGTGCAAGTCCGGT TACCATGGCGACGCCACTAGGGGAACTGCAGACGACTGTCAGTCCGTCAG ACAGCAGTGTTTCTGTCACGGGCACTCCGAGCTGTGTGAGGAGGGGTACT TCGGAGACGCCACGAAAGGGACCCCTGAGGACTGCAAACCCATGAAACAG TGTCAGTGCCATGGCCACTCCAACAGATGCGACAGTACTGGAGTTTGTAA GAACTGCAGGCATAACACCATGGGGCAGATGTGCGAGCGGTGCAGGCCGG GATACGTGGGGAACCCCAGACAGCAGACACCCAGAGACTGCAGCCCGCTC TTCCCAGGATGCAACTGTCACGGCCACTCCCTGACCTGCGACGCGTTGGG CAAGTGCACGTTCTGCGCACACAACACCGTCGGTGACCGGTGTCAGAAGT GCCTGCCGGGGTACGTGGGAGACGCGCGGCGCGGTACACCCACCGACTGT CAGCAGTACAGACCGACCACGCCCTGCGTGTGCAACGGACACTCCAAACA ATGCGACCAGTCTGGCACCTGCGTGAACTGTCAACACAACACGGAGGGCG CGCGCTGTGAGCGGTGCAAGTCCGGTTACCATGGCGACGCCACTAGGGGA ACTGCAGACGACTGTCAGTCCGTCAGACAGCAGTGTTTCTGTCACGGGCA CTCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000303 | genome | Sc0000303:118222..124471 + |
Properties
Property Name | Value |
Transcript id | BL97225_cuf1 |
Biotype | protein_coding |
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