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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97216_cuf4 >transcript:BL97216_cuf4-protein ID=transcript:BL97216_cuf4-protein|Name=transcript:BL97216_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=165bp
SGLHAHPACSSYCITKAALESFSDALRHEMHKWGVKVVLVEPCAFSTCTD
IVKAETYNRLIQNLRDNIEEAVKEDYGMEYVDFKLGKIRAAHFAPFQAKD
AKAVIDALADAVTLTTPSHRYLIGGSFEDYVNNAWLGYFPSKWTDSTERN
EREDDPKPAMLQKTT Run BLAST on NCBI mRNA from alignment at Sc0000054:539405..541585- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97216_cuf4 ID=transcript:BL97216_cuf4|Name=transcript:BL97216_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=2181bp|location=Sequence derived from alignment at Sc0000054:539405..541585- (Branchiostoma lanceolatum)
GTCCGGACTTCACGCACACCCGGCTTGTTCTTCCTACTGCATAACCAAGG
CGGCCCTGGAGTCTTTCTCGGATGCGCTCAGGTATGTAACAAGTGCATAT
ATTTATACGGATGTACATACATATGCATGGACATACATACCTACGTACAC
ACATACATACATACATGCTTATTACATCATCTTCATTATCATCACTGCAT
ATCAATGTATAGTACTGAGGCGGGCCGTCATGTTCGTCCACATCTTAGCA
GTTGCTATCCCCATATATATATATATATGTTATATATGAATGCATCATGC
TTACATACATGCATTATACACTTACACATTAAGTACAATGTCACAACTCA
TACATATGAGTATGTCATAATTGAGAAGTTGCACAGTGTGAAAGGTCTCC
TTAAACAAAGAGCCCTGCAGCAGCATTCCTGCGTTCCTTTAGATTTTAAA
CGCATGTGAGAAGGCCTCAGTCTATTTACATGAATGAATTCAAGGTTTAT
TGCAAGTTTGTTGCAAAAGTATATTATAAGCAACTTGCTGAATTAGGTAC
GTAGCGCAGTCAAACGATTTTACATCGAAGAGAAACAAAAGGAAAATCTT
GAAAAATTCAAACCTTTGTGTTTTTTCTACCTTGTTAACTAACGAACTTG
ACTAATACTACAGGCATGAGATGCACAAGTGGGGTGTGAAAGTCGTCCTG
GTAGAGCCATGTGCCTTTTCTACGTGTACGGATATTGTTAAGGCGGAGAC
CTACAATAGGCTCATTCAGGTATGCCGTCTGCATCATGGTTGTATTGGTA
CCCTTTTGAAGCCATTGAGTTTTTCATAAAACCAACGGCTATTGCACAAC
TTAACTGAGCATGTTATAGACAAGGAGAACACCGGGTTGTAAAGGGCTAT
TGCAAATATTGACATTAAGGAAACGTCTAGTTCTATCTTCAATCATATGT
TTCAGGAATAAGAACAAATATGACGATAACACAGAAACTCTACGACAAAA
AAAAAAGAAGTATATAGTGCAGGAGGCTAGCTTTTTTTGTTCTTCATTTT
CACGAAACGACCACTTACATGTATCATCCAGAACCTGCGGGACAACATAG
AAGAAGCTGTGAAGGAGGATTATGGCATGGAGTACGTCGACTTCAAGTTG
GGAAAGATACGAGCAGCTCATTTTGCCCCATTCCAAGCTAAAGATGCTAA
GGCTGTTATAGATGTGAGTCTTTTCTGAGTCTACATAGTCACTCCGGCAA
GGTTTGCTGATTGCTGAATCATGATTCTATTCAAAGAACAAAAAGTCAGT
AAAACAGGTTAAGTTGTGATTTGAGCAGAGAAAAAGTTTTACCTCACCTG
TATTTGATGGAATTGATGTGAATGATAATGATGTCTAAAGAGGATACTTA
ATAGTAGAATGGGGCGTATTAGGAACATGTGGAAGTCGCCTGTAAATACT
AGGTTGTTAGTTTTGACGTAGAAAGTATTTCTCTGGTTTGATACGTCTTA
CTAACATCAAACTACAGGTATGATGCATTCTAGACAACAACATTACCTGC
TGATAGCAAAGATTGAATACAGTGCACAACTTCTAATACATTTATTGCCC
TGCTAGAATTCTGCCTGCAACGTTTTATCAATCGTACGGAAAATTCAAAG
GACACAAAGAACAACATTGATGTTGCTGATGTTCAATTCGCAGGCCCTGG
CGGACGCTGTCACCCTGACCACCCCCTCTCATCGCTACTTGATCGGAGGC
AGTTTTGAGGACTACGTAAACAACGCCTGGCTGGGCTACTTCCCCTCGAA
GTGGACTGACTCTACAGAGAGGAACGAGAGGGAAGACGACCCTAAACCTG
CCATGCTGCAGAAAACTACATAAGACAGCCCCAGTTGGTTTCGTAGCGTT
CGTAAATTCAATAACTCAGTGTTTTTGAGGTTTGAAACACATTGTTTATT
GTCTATTTTGCTCAAATACTTTAATTACAATATATAGATACAGAAAATGG
ATAGATAGAAAAGATCATTATCAAACTTTTCTTGTTAGATTATCATATGT
TAGAATCCTTTAATTAGACACGCTCAGAGTCAAAGCTCCTGTGTTGAGGA
AAAAGGAAAGTAGGGATAAAGAGCAATATATGAGTAGTAATAAACAGCAA
AATACAGTACAACATATTCTTGGCAAGTTTG Coding sequence (CDS) from alignment at Sc0000054:539405..541585- >transcript:BL97216_cuf4 ID=transcript:BL97216_cuf4|Name=transcript:BL97216_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=1992bp|location=Sequence derived from alignment at Sc0000054:539405..541585- (Branchiostoma lanceolatum)
TCCGGACTTCACGCACACCCGGCTTGTTCTTCCTACTGCATAACCAAGGC
GGCCCTGGAGTCTTTCTCGGATGCGCTCAGGCATGAGATGCACAAGTGGG
GTGTGAAAGTCGTCCTGGTAGAGCCATGTGCCTTTTCTACGTGTACGGAT
ATTGTTAAGGCGGAGACCTACAATAGGCTCATTCAGAACCTGCGGGACAA
CATAGAAGAAGCTGTGAAGGAGGATTATGGCATGGAGTACGTCGACTTCA
AGTTGGGAAAGATACGAGCAGCTCATTTTGCCCCATTCCAAGCTAAAGAT
GCTAAGGCTGTTATAGATGCCCTGGCGGACGCTGTCACCCTGACCACCCC
CTCTCATCGCTACTTGATCGGAGGCAGTTTTGAGGACTACGTAAACAACG
CCTGGCTGGGCTACTTCCCCTCGAAGTGGACTGACTCTACAGAGAGGAAC
GAGAGGGAAGACGACCCTAAACCTGCCATGCTGCAGAAAACTACATAATC
CGGACTTCACGCACACCCGGCTTGTTCTTCCTACTGCATAACCAAGGCGG
CCCTGGAGTCTTTCTCGGATGCGCTCAGGCATGAGATGCACAAGTGGGGT
GTGAAAGTCGTCCTGGTAGAGCCATGTGCCTTTTCTACGTGTACGGATAT
TGTTAAGGCGGAGACCTACAATAGGCTCATTCAGAACCTGCGGGACAACA
TAGAAGAAGCTGTGAAGGAGGATTATGGCATGGAGTACGTCGACTTCAAG
TTGGGAAAGATACGAGCAGCTCATTTTGCCCCATTCCAAGCTAAAGATGC
TAAGGCTGTTATAGATGCCCTGGCGGACGCTGTCACCCTGACCACCCCCT
CTCATCGCTACTTGATCGGAGGCAGTTTTGAGGACTACGTAAACAACGCC
TGGCTGGGCTACTTCCCCTCGAAGTGGACTGACTCTACAGAGAGGAACGA
GAGGGAAGACGACCCTAAACCTGCCATGCTGCAGAAAACTACATAATCCG
GACTTCACGCACACCCGGCTTGTTCTTCCTACTGCATAACCAAGGCGGCC
CTGGAGTCTTTCTCGGATGCGCTCAGGCATGAGATGCACAAGTGGGGTGT
GAAAGTCGTCCTGGTAGAGCCATGTGCCTTTTCTACGTGTACGGATATTG
TTAAGGCGGAGACCTACAATAGGCTCATTCAGAACCTGCGGGACAACATA
GAAGAAGCTGTGAAGGAGGATTATGGCATGGAGTACGTCGACTTCAAGTT
GGGAAAGATACGAGCAGCTCATTTTGCCCCATTCCAAGCTAAAGATGCTA
AGGCTGTTATAGATGCCCTGGCGGACGCTGTCACCCTGACCACCCCCTCT
CATCGCTACTTGATCGGAGGCAGTTTTGAGGACTACGTAAACAACGCCTG
GCTGGGCTACTTCCCCTCGAAGTGGACTGACTCTACAGAGAGGAACGAGA
GGGAAGACGACCCTAAACCTGCCATGCTGCAGAAAACTACATAATCCGGA
CTTCACGCACACCCGGCTTGTTCTTCCTACTGCATAACCAAGGCGGCCCT
GGAGTCTTTCTCGGATGCGCTCAGGCATGAGATGCACAAGTGGGGTGTGA
AAGTCGTCCTGGTAGAGCCATGTGCCTTTTCTACGTGTACGGATATTGTT
AAGGCGGAGACCTACAATAGGCTCATTCAGAACCTGCGGGACAACATAGA
AGAAGCTGTGAAGGAGGATTATGGCATGGAGTACGTCGACTTCAAGTTGG
GAAAGATACGAGCAGCTCATTTTGCCCCATTCCAAGCTAAAGATGCTAAG
GCTGTTATAGATGCCCTGGCGGACGCTGTCACCCTGACCACCCCCTCTCA
TCGCTACTTGATCGGAGGCAGTTTTGAGGACTACGTAAACAACGCCTGGC
TGGGCTACTTCCCCTCGAAGTGGACTGACTCTACAGAGAGGAACGAGAGG
GAAGACGACCCTAAACCTGCCATGCTGCAGAAAACTACATAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000054 | genome | Sc0000054:539405..541585 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97216_cuf4 |
| Biotype | protein_coding |
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