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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97215_cuf3 >transcript:BL97215_cuf3-protein ID=transcript:BL97215_cuf3-protein|Name=transcript:BL97215_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=159bp
VQQVKDRLSTSSEGLYALVNNAGVWQPGEIEWVSIAAYRRVMEVNTFGNV
RVTKAFLPLIRRAKGRVVAVTSAVGLHATPAASAYCMTKAATEFFSDALR
HEMHKWGVKVVIVEPGNFAQSTDIILPAVFNKYTEDLRNGMEEVVKEDYG
MEYFDFKME Run BLAST on NCBI mRNA from alignment at Sc0000054:531711..533576- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97215_cuf3 ID=transcript:BL97215_cuf3|Name=transcript:BL97215_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=1866bp|location=Sequence derived from alignment at Sc0000054:531711..533576- (Branchiostoma lanceolatum)
GTACAACAGGTCAAAGATCGTCTATCGACATCTTCCGAAGGCAATTACCT
ATATTCTTAGTCAATCATCAGTAAATGCTTTGGCCATCTAGGTATTTTGG
TAATTTGATCATGTAAAGGCAGTCAGAAATGTTACCTATTGTCCTTTTTA
TTACAAAAGTCCTCTCCTTTGTCTATAGAATCAATTATTGGCTTGTTCCA
ACATATTTCAACAGGTCTTTACGCACTGGTGAACAATGCTGGAGTCTGGC
AGCCGGGAGAGATAGAGTGGGTCAGCATCGCCGCCTACAGACGTGTGATG
GAAGTGAACACGTTTGGTAACGTGCGGGTCACCAAGGCGTTCTTGCCTCT
GATTCGTCGGGCGAAAGGTGAGAATCACTGCAGTTGTGCGACTCTTTTAC
AGCAAATGTCTACAACACTCTGTAGTTAACAGCAGTAGTTATCTTCATAT
ATGCATTCCATTCCACAAAAGAATTCTACTAGGACATTTTCATTTTTAAG
GGACCGGTCACATTCGTTGTACGATCGCAAAATGAGATCATTCTTGGAAT
GGTCGTGCATTTGGTCTACAAAATCTTGCTGTTTTGCTACCGAAATAGCT
GTCTTAGATCCTTGTCGGCGACTGGTTCTGTCACAACCTGGTCGAAAAAC
CCAACGACATCAAAATCGTACGACGACCTACATCTACGACGAACGTGATT
GCGTCGTTACTTGGCTGCGTCGTTTATTTTTTAATTCTTAATTTTGCTTT
TGGACGGACAAGCACGACACGGAACTGCACTGAAGTTTTTATAACTTATA
TTAACAGTGCCACAAGAAGGTTGGGTAGAGGCGTGTAAAGTGCCCTTTCC
AAGGTCACAACATCGATGGCGTCAGGGGATTCGAACCCGGGACCGTTGTG
TTCTGGGTCGAACACCCTGCCGTTACGCTACACGACCCCACCTTACTTCT
TGAGACATGATGTATGGATGTCGGTATATCTCTGCACGTTAGGGCGAGTC
GTGGCTGTCACGAGTGCGGTGGGGCTGCACGCCACCCCCGCTGCGTCTGC
CTACTGCATGACGAAAGCGGCCACGGAATTCTTCTCCGATGCCCTCAGGT
ATGTCACCAACCATACAAGTTTTCAGACTCAAGCGCATTTAGGTCCAACA
TATATCCCTATCCGAGAAAACAGAAACGTTTAAAGGACACCATAAAATAA
CACATTGTCAGCTATTGTCTTTGCCTATAGGGAACGACTAAAGTATGTAT
TGACATACATGTATGTCGTCTCGTATCACGACCTAAGTCATTCATGGTGC
GACTTGGGGCGTTAAGGGAAACTCGCTTGGAAACTCGAGCCTATCACTAG
TTGTTTGACACACGACTTATAACTTAACTTGAGCTGACCGACCAGGGATC
TGCATATGAGCTCGAGTACTTGTCAACTTGACACATCTTCAGTCACCTAG
AAAATTAAGTCGTTGTTTAGACACGCCACAGGTCGTATCTGCAGTTCGTA
CTCCACATACCACAACCTATCAACGTTCTGTCTTCATCGTTTCATATCTC
TGATGAACACCATCGGAAATGCAGGCATGAGATGCACAAGTGGGGCGTGA
AGGTCGTCATCGTGGAGCCGGGAAACTTTGCGCAGTCCACTGACATCATT
TTGCCAGCGGTGTTCAATAAGTATACTGAGGTATGGCGTCTACACTACAT
TTGAAAAAAGCATATTATAAACCTTGCTTTTCTTGATGGGTATCTGTAGG
ACTGTATTTTGTGATGGAACAAGTTTCTTCACTTTTTGAACAGGACTTAC
GGAACGGCATGGAAGAGGTTGTAAAGGAGGACTATGGCATGGAGTACTTT
GACTTCAAAATGGAGC Coding sequence (CDS) from alignment at Sc0000054:531711..533576- >transcript:BL97215_cuf3 ID=transcript:BL97215_cuf3|Name=transcript:BL97215_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=2385bp|location=Sequence derived from alignment at Sc0000054:531711..533576- (Branchiostoma lanceolatum)
GTACAACAGGTCAAAGATCGTCTATCGACATCTTCCGAAGGTCTTTACGC
ACTGGTGAACAATGCTGGAGTCTGGCAGCCGGGAGAGATAGAGTGGGTCA
GCATCGCCGCCTACAGACGTGTGATGGAAGTGAACACGTTTGGTAACGTG
CGGGTCACCAAGGCGTTCTTGCCTCTGATTCGTCGGGCGAAAGGGCGAGT
CGTGGCTGTCACGAGTGCGGTGGGGCTGCACGCCACCCCCGCTGCGTCTG
CCTACTGCATGACGAAAGCGGCCACGGAATTCTTCTCCGATGCCCTCAGG
CATGAGATGCACAAGTGGGGCGTGAAGGTCGTCATCGTGGAGCCGGGAAA
CTTTGCGCAGTCCACTGACATCATTTTGCCAGCGGTGTTCAATAAGTATA
CTGAGGACTTACGGAACGGCATGGAAGAGGTTGTAAAGGAGGACTATGGC
ATGGAGTACTTTGACTTCAAAATGGAGGTACAACAGGTCAAAGATCGTCT
ATCGACATCTTCCGAAGGTCTTTACGCACTGGTGAACAATGCTGGAGTCT
GGCAGCCGGGAGAGATAGAGTGGGTCAGCATCGCCGCCTACAGACGTGTG
ATGGAAGTGAACACGTTTGGTAACGTGCGGGTCACCAAGGCGTTCTTGCC
TCTGATTCGTCGGGCGAAAGGGCGAGTCGTGGCTGTCACGAGTGCGGTGG
GGCTGCACGCCACCCCCGCTGCGTCTGCCTACTGCATGACGAAAGCGGCC
ACGGAATTCTTCTCCGATGCCCTCAGGCATGAGATGCACAAGTGGGGCGT
GAAGGTCGTCATCGTGGAGCCGGGAAACTTTGCGCAGTCCACTGACATCA
TTTTGCCAGCGGTGTTCAATAAGTATACTGAGGACTTACGGAACGGCATG
GAAGAGGTTGTAAAGGAGGACTATGGCATGGAGTACTTTGACTTCAAAAT
GGAGGTACAACAGGTCAAAGATCGTCTATCGACATCTTCCGAAGGTCTTT
ACGCACTGGTGAACAATGCTGGAGTCTGGCAGCCGGGAGAGATAGAGTGG
GTCAGCATCGCCGCCTACAGACGTGTGATGGAAGTGAACACGTTTGGTAA
CGTGCGGGTCACCAAGGCGTTCTTGCCTCTGATTCGTCGGGCGAAAGGGC
GAGTCGTGGCTGTCACGAGTGCGGTGGGGCTGCACGCCACCCCCGCTGCG
TCTGCCTACTGCATGACGAAAGCGGCCACGGAATTCTTCTCCGATGCCCT
CAGGCATGAGATGCACAAGTGGGGCGTGAAGGTCGTCATCGTGGAGCCGG
GAAACTTTGCGCAGTCCACTGACATCATTTTGCCAGCGGTGTTCAATAAG
TATACTGAGGACTTACGGAACGGCATGGAAGAGGTTGTAAAGGAGGACTA
TGGCATGGAGTACTTTGACTTCAAAATGGAGGTACAACAGGTCAAAGATC
GTCTATCGACATCTTCCGAAGGTCTTTACGCACTGGTGAACAATGCTGGA
GTCTGGCAGCCGGGAGAGATAGAGTGGGTCAGCATCGCCGCCTACAGACG
TGTGATGGAAGTGAACACGTTTGGTAACGTGCGGGTCACCAAGGCGTTCT
TGCCTCTGATTCGTCGGGCGAAAGGGCGAGTCGTGGCTGTCACGAGTGCG
GTGGGGCTGCACGCCACCCCCGCTGCGTCTGCCTACTGCATGACGAAAGC
GGCCACGGAATTCTTCTCCGATGCCCTCAGGCATGAGATGCACAAGTGGG
GCGTGAAGGTCGTCATCGTGGAGCCGGGAAACTTTGCGCAGTCCACTGAC
ATCATTTTGCCAGCGGTGTTCAATAAGTATACTGAGGACTTACGGAACGG
CATGGAAGAGGTTGTAAAGGAGGACTATGGCATGGAGTACTTTGACTTCA
AAATGGAGGTACAACAGGTCAAAGATCGTCTATCGACATCTTCCGAAGGT
CTTTACGCACTGGTGAACAATGCTGGAGTCTGGCAGCCGGGAGAGATAGA
GTGGGTCAGCATCGCCGCCTACAGACGTGTGATGGAAGTGAACACGTTTG
GTAACGTGCGGGTCACCAAGGCGTTCTTGCCTCTGATTCGTCGGGCGAAA
GGGCGAGTCGTGGCTGTCACGAGTGCGGTGGGGCTGCACGCCACCCCCGC
TGCGTCTGCCTACTGCATGACGAAAGCGGCCACGGAATTCTTCTCCGATG
CCCTCAGGCATGAGATGCACAAGTGGGGCGTGAAGGTCGTCATCGTGGAG
CCGGGAAACTTTGCGCAGTCCACTGACATCATTTTGCCAGCGGTGTTCAA
TAAGTATACTGAGGACTTACGGAACGGCATGGAAGAGGTTGTAAAGGAGG
ACTATGGCATGGAGTACTTTGACTTCAAAATGGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000054 | genome | Sc0000054:531711..533576 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97215_cuf3 |
| Biotype | protein_coding |
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