|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97212_cuf1 >transcript:BL97212_cuf1-protein ID=transcript:BL97212_cuf1-protein|Name=transcript:BL97212_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=156bp
RNERSPNKMAEGQEDSGQQVIFPCDLPTWSDLKLLLQGLKTVKTSDDLVS
ALDHVYEVAHSRQKVPKRGKHSRRARGRKPPKRERDSHVSGLAWFLQNVL
DERERRDFFGKTLPCIADRALELETLKPADGLNVSQRQRGENEYLASVRD
FLSDRM Run BLAST on NCBI mRNA from alignment at Sc0000054:352614..353433+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97212_cuf1 ID=transcript:BL97212_cuf1|Name=transcript:BL97212_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=820bp|location=Sequence derived from alignment at Sc0000054:352614..353433+ (Branchiostoma lanceolatum)
ATCGAAACGAACGGTCTCCAAACAAAATGGCTGAAGGACAAGAAGACAGC
GGACAACAAGTCATCTTTCCCTGCGATCTACCCACCTGGAGTGACCTCAA
GCTGCTTCTGCAGGGCCTGAAGACGGTGAAGACATCCGATGATCTAGTCT
CGGCGCTAGATCACGTTTACGAGGTTGCCCACTCTCGCCAGAAGGTACCG
AAGAGGGGTAAACACTCTCGCCGGGCGAGGGGGAGGAAGCCCCCGAAGAG
GGAGCGAGACAGTCACGTATCGGGACTGGCATGGTTCCTACAAAACGTCC
TTGACGAGCGAGAGAGACGGGACTTTTTCGGAAAGACCTTGCCGTGTATA
GCAGACAGGGCTTTGGAACTGGAGACTTTGAAACCAGCAGATGGACTGAA
CGTTAGCCAAAGACAGCGAGGTAAGGTTTGGTGGGGGGAGGGCAACAAAG
CTAGTAGCAACAAATCCGCGCTGCACTGCATAATGATATAATATTTCATT
GACATTTATTACGTTCAACTGATTGTATATTTGCTACATAAGACATTTAC
ATTTTTTTGCAAGCCACAGGAAATTCTGATTGCCATGTCATTTGTTTATT
ATATGCTCCATGTTTATTTGTTTATATGGTGACCTTGTGGTTAGGGTTGT
TGACTCGGAACCCGGAGGTACCGAGTTCGAATCCCTGACAGGTCCCAATG
TTGTGCCCTTGGGAAAAGGCACTTAACACCTATTTCCTTACTCTACTCAG
GTGAAAATGAGTACCTAGCTTCAGTTAGGGACTTCCTCTCGGACAGGATG
TAAAGTTGGAGGTCCTGTGT Coding sequence (CDS) from alignment at Sc0000054:352614..353433+ >transcript:BL97212_cuf1 ID=transcript:BL97212_cuf1|Name=transcript:BL97212_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=942bp|location=Sequence derived from alignment at Sc0000054:352614..353433+ (Branchiostoma lanceolatum)
CGAAACGAACGGTCTCCAAACAAAATGGCTGAAGGACAAGAAGACAGCGG
ACAACAAGTCATCTTTCCCTGCGATCTACCCACCTGGAGTGACCTCAAGC
TGCTTCTGCAGGGCCTGAAGACGGTGAAGACATCCGATGATCTAGTCTCG
GCGCTAGATCACGTTTACGAGGTTGCCCACTCTCGCCAGAAGGTACCGAA
GAGGGGTAAACACTCTCGCCGGGCGAGGGGGAGGAAGCCCCCGAAGAGGG
AGCGAGACAGTCACGTATCGGGACTGGCATGGTTCCTACAAAACGTCCTT
GACGAGCGAGAGAGACGGGACTTTTTCGGAAAGACCTTGCCGTGTATAGC
AGACAGGGCTTTGGAACTGGAGACTTTGAAACCAGCAGATGGACTGAACG
TTAGCCAAAGACAGCGAGGTGAAAATGAGTACCTAGCTTCAGTTAGGGAC
TTCCTCTCGGACAGGATGTAACGAAACGAACGGTCTCCAAACAAAATGGC
TGAAGGACAAGAAGACAGCGGACAACAAGTCATCTTTCCCTGCGATCTAC
CCACCTGGAGTGACCTCAAGCTGCTTCTGCAGGGCCTGAAGACGGTGAAG
ACATCCGATGATCTAGTCTCGGCGCTAGATCACGTTTACGAGGTTGCCCA
CTCTCGCCAGAAGGTACCGAAGAGGGGTAAACACTCTCGCCGGGCGAGGG
GGAGGAAGCCCCCGAAGAGGGAGCGAGACAGTCACGTATCGGGACTGGCA
TGGTTCCTACAAAACGTCCTTGACGAGCGAGAGAGACGGGACTTTTTCGG
AAAGACCTTGCCGTGTATAGCAGACAGGGCTTTGGAACTGGAGACTTTGA
AACCAGCAGATGGACTGAACGTTAGCCAAAGACAGCGAGGTGAAAATGAG
TACCTAGCTTCAGTTAGGGACTTCCTCTCGGACAGGATGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000054 | genome | Sc0000054:352614..353433 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97212_cuf1 |
| Biotype | protein_coding |
|
