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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97211_cuf12 >transcript:BL97211_cuf12-protein ID=transcript:BL97211_cuf12-protein|Name=transcript:BL97211_cuf12|organism=Branchiostoma lanceolatum|type=polypeptide|length=170bp
MAGLPRSLGGRATLLVVLGLLLTPLLAESTGSAADAAKAARREQLFQKVR
AQVDKILQKAIRTKRNVVRIRVGFKVCSTKEAQPEIQRRITDAVDSGRIG
GFSTEPGSTRFGNLEYYAAYRLTMGFHDDLRNETSMRYTAVKDDIFVNAS
SELALVRGVAKVDLDEFRPG Run BLAST on NCBI mRNA from alignment at Sc0000054:80753..85413- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97211_cuf12 ID=transcript:BL97211_cuf12|Name=transcript:BL97211_cuf12|organism=Branchiostoma lanceolatum|type=mRNA|length=4661bp|location=Sequence derived from alignment at Sc0000054:80753..85413- (Branchiostoma lanceolatum)
GCCGACTTAGAGAGACGGATCCGCAGTGAGCTCGTTTACCGTGCAACATG
GCGGGTCTTCCGAGGAGTTTGGGAGGCCGAGCGACCTTGTTGGTCGTGCT
GGGTCTCTTGTTGACTCCGTTACTGGCTGAATCGACAGGTGAGAAAGTTT
GGGCGTATTGAACCACTTTGGACTGTACAACTTCTGTTTACAAGGTCATG
TGTAGTGTTGTCAAAGCACGACTGTGAGATACTGAAATTGAGTTTAAAAC
GACAGAGAAGAAAATCTGGACTGGTCATTCTCTGAAAGGTGTGTTATAAT
GGCCAGAGTGAATAGAAATATCATTGTTCTTTTAATTTCCCTGCGTGAAA
CAGTTTGGCCAAATTGGTAAACCCCAGTGCAGTCCACTTTCACAATTGAG
AGGTGGACTGCACTGGGCGATACGACTTCCCTATACGACTTTCTNCGACT
TCCCTGTACGACTTTCTCTACCCTATCCCAGGGAGGGGAACTTTTCTATC
ATTTGTTTATTGGTTTACGATCTCCTCTCCGATTTAGCTTAATTACCGAT
AGCATTAATCTCACGGTAAAGGTTGTATCTGTGTGTATATTTGCTTGAAG
TTACTAGCATTAAACAAAATTTACGTGGAATTTGGACGCCCTAACATTGA
GAACAGACCGACATTTCTGTACCTATACTTGTTCAAAAATCGTTTGTTGA
TGTCAGAATGGTGGTGCAACATATTCGGTACACGTGCGCCCAGGTTTCCT
TCTTGCAGCTTGCTGCTCAAGTATCGAAAATGATTTAAGACAGACACTTC
GTCGTCACTTTGTGCAGAAAATATTATACATGTATTCACTAAAGAATAAG
TCAACACATGGGTGTGCCGTATTTTGCTGATAACCTTTGTAACCCTTTGT
CGTATAAAAAGGGGAACCTCCCATTGGTTGTAAACCTCCCTCGTCGTTTA
AAGTCGTCTTGTCCTTTCTCTGGGCCGGGTCTACTGGCCAAAGGTAGCTT
TTTTACACCGTTTATTCGAACTCGGATCTAGAGTCCAACACGCACTTTTT
CTCGGTTTTTGTCTGTTTTGGGACGTTTTCCCACATATATGAGTCATCAA
GGTTATACCCCTGGAGACATGATTAGATCTTGTTGAACGAGTACTGAGCG
AGGTCAACCCAAACATGAGCCAGTATACTTAGTTTACTTTCATACAATGC
TGTCGCTTGTTTTATGTCAAATCAGGGACAATGGTACATAGATTTTATGC
AAGACTTCTAGCAACTAGCTTGAAACTAACAACGTTTACTAAGATCTAGA
ATAAATTGTAGACCTTTTTCAGATCCATGTTTTTTTTAATAAGCAGGAAC
CGAATTGGAGTTTAAAACCCAGTAAATCCCTTGTTTGAACAGCTAGGCTA
GGTTCATTTGTCCAAAAGAGCTGCATGTGTGTTGCCTGTGGGGCTTGTAT
TTTGAGACAATGAGCAGGAAAATCTTCAAATAGTCCAATCGCACGAACAA
CATAGCCCTGATTTCCAAATAGAAAGTTAGTGATTTGCAATGCCCACACG
CGGGAGCTCGACATTTTAAATGTCAAAAGCCATAAGCCATACGTCATGAT
GTTGTCATACATGGTCGGCGTTTCAGTGGTTGAACAATTTTGACGCAAAC
GAAGGAGTATGTGTCATAACAATTGTGCAAGGTTTTAAACTGAAGTGCCA
AGTTCTATATCTTGATGAAAAACCTTTGACCAATATTTTTTCGCCAATTA
TGAAAGACAGGAGAACATTCACTTGACTAATACTGTGAGCGCTACGTCAT
AAAAATACTTCTCAGCCTAATACCATATACCTTGAAAAATGATACAAGAT
GACATACAATATCATGGGAGATGTACGTCACTGTCGACCCACTATCAGTG
CAGACTAACTGACCCAACAGCAGAAGCTGGGGGTGTTCTATCCACCTATC
AAACGATGAAATTGGGACAACAATGTCAAATACAATGAAGCACAAAAATG
ACCGTTCTTTCTTGAATGAACGTTTCTCCAGGTTCTGCTGCAGACGCCGC
CAAAGCCGCGCGTCGTGAGCAGCTGTTTCAGAAGGTTCGGGCTCAAGTGG
ACAAAATCCTGCAGAAAGCCATCCGCACCAAACGCAACGTTGTGTAAGTA
CAAGTCGGCTTAAGTCACCGACGAAAGATAGCGGATGCTGTCTGAAACGT
CTGACTGTTTCAAAATGTTATCCAGTTGCTTGAGTAACTGTTATTTGGAG
AGTCAGTTAGATTTTTATGCCCTATACGTTTTGAAATCGCCGAGACAATC
GTTTTGACACCTGCAAAAGGTCTTTGAGTTTAAGCTTGTTAAACGATGAA
GCAATCTGCGCTGATTCCTTTAACTCTCACTGTGACTTTAAGTGCATACT
GACAGAACAAAATCTTTCCACGACAACGGACATCACAAATGTATCGGACA
AGCCTGATACTGGACTAATATCAAACCTAAATGTTTTCCATAGGCGGATC
CGGGTGGGCTTTAAGGTATGCTCCACGAAAGAGGCCCAGCCGGAGATACA
GCGGCGTATCACTGACGCTGTTGACTCAGGCCGCATCGGCGGCTTTAGCA
CCGAGCCGGGGTCGACGCGATTCGGTAAGTTATCGTCATCGCTGGCGCTA
GATGTTAGAGGTGAACGTGTTGTAGTTGTAGGTAGGTAAAAATCCCCGTT
TAGACATACATTTTAATAACTTACGAGTTGCCTACTTCGTTCAAGTGAAC
GTGTTGTATATGATAACTAGAGTTCCACGAACACATTATCTTCGCCAAAT
AATCAAGGCTTATTATGGAGAGCGATTGATATTTACGTGCTTATCACCCC
CTGCAAAGTTGATCATGCACCATACCATTTGGAAGTTATGATGGGGCGAA
TGAGTCCAGTCTAGATGGGGTTAAAAATCGTTTGGTGGTACAGGACTAGT
ATATGTGTAGAGTGTGCTGATACAAATGTATATGTTATAACTGGTCATGA
AAAAATATGAGTATGATGATATTATATGGGCCACAAAGGTTCGATATTGC
AGTGTTGTAAGTTGAAAGTGATGATGAAATGGTACAGTCAATATATATGA
ATAGAATAGATCTTTATTCCATATCATACACATTTTGAAAGACATAGTAC
ATAGTACATTTACATGTGACTTTTCCGCACCTAGCAGTGGTGCAGTTTTG
GTGAAATTTATGAAATTCATAAATATCATAATATCATAATATCATAATAT
CATAATATCATAATATCATAATATCATAATATCATAATATCATAATATCA
TAATATCATAATATCATAATATCATAATATCATAATATCATAATATCATA
ATATCATAATATCATAATATCATAATATCATAATATCATAATATCATAAT
ATCATAATATCATAATATCATAATATCATAATATCATAATATCATAATAT
CATAATATCATAATATCATAATATCATAATATCATAATATCATAATATCA
TAATATCATAATATCATAATATCATAATATCATAATATCATAATATCATA
ATATCATAATATCATAATATCATAATATCATAATATCATAATATCATAAT
ATCATAATATCATAATATCATAATATCATAATATCATAATATGATATTAT
TACAGTAAAAAGGGTTAGCTTCCAACTTTGACATGTTCAGACTTTACAGA
GTATAATCCTTTACAGAGAAATATCCTCGGCGAAGATAATTAACGTTTGC
ACATTCATTTTAGCACTTTACAACCCAAGGACTGCCTACTTGGTTCTTTG
CTATGTCAAAAAGCAATATTCAAAGTGTTTAATGACGTTGTGTGTCAGGC
TAACCGTTGACCTTTGATTGCAAAAGGGAACTTGGAGTACTACGCAGCCT
ATCGATTAACCATGGGGTTCCACGATGATCTGCGCAATGAAACATCCATG
CGGTACACAGCAGTCAAAGACGACATTTTTGTGGTACGAATTCATATACA
ATGCTTTATTTCCTTTATTTGTATGGTAGGCATATCTTTCTTACTTATTT
TACCTGTCACAGGAAATAGCAGTATGGGGGAAAGACGAAAAGAGCTGAAG
CAAAAGTGTACATGTTGTACTTCTTACTTGTTGAGGTACCTCTTGACAAA
AATGTTGACAACTTTGAAATGTGAAGAGGAAAAGAAACAGAGACAAAGTA
GACAATGTAATGTCACAATCAGTGTAAAGCTAGTGCTAAGTTAAAAAGTG
GACCAGTATCTTTGTGGTTTCTACAGACACGAGGTACAAAAGGTGCTAAA
TACATTTTTAACGTTACATACGTTAAACAATTTTCCAATAAAAAACGTCC
TACATGTCTGTGTATATTGGTTAAGCAGAAAAACCAAGATACAGATTCCA
TTTGAAAGCTGGTAATATATTTGAATATATATCTTTTTTTTCGATTTGTA
GAATGCCTCATCTGAGCTGGCGCTTGTGAGAGGAGTAGCCAAGGTGGACT
TGGACGAGTTCAGGCCAGGGTGAGTTGGGCTGGATCTTTGTGAGCTTGTC
TATTCTTGTTGAATATTTTTTTGTTCCTTCACAGTTCTCACGAAACTTTT
CCGTTTGATTTTTCTGCTCTGGAAACAATCAATAACGTTACAGGTTGTTG
ATGCAACGAAC Coding sequence (CDS) from alignment at Sc0000054:80753..85413- >transcript:BL97211_cuf12 ID=transcript:BL97211_cuf12|Name=transcript:BL97211_cuf12|organism=Branchiostoma lanceolatum|type=CDS|length=2565bp|location=Sequence derived from alignment at Sc0000054:80753..85413- (Branchiostoma lanceolatum)
ATGGCGGGTCTTCCGAGGAGTTTGGGAGGCCGAGCGACCTTGTTGGTCGT
GCTGGGTCTCTTGTTGACTCCGTTACTGGCTGAATCGACAGGTTCTGCTG
CAGACGCCGCCAAAGCCGCGCGTCGTGAGCAGCTGTTTCAGAAGGTTCGG
GCTCAAGTGGACAAAATCCTGCAGAAAGCCATCCGCACCAAACGCAACGT
TGTGCGGATCCGGGTGGGCTTTAAGGTATGCTCCACGAAAGAGGCCCAGC
CGGAGATACAGCGGCGTATCACTGACGCTGTTGACTCAGGCCGCATCGGC
GGCTTTAGCACCGAGCCGGGGTCGACGCGATTCGGGAACTTGGAGTACTA
CGCAGCCTATCGATTAACCATGGGGTTCCACGATGATCTGCGCAATGAAA
CATCCATGCGGTACACAGCAGTCAAAGACGACATTTTTGTGAATGCCTCA
TCTGAGCTGGCGCTTGTGAGAGGAGTAGCCAAGGTGGACTTGGACGAGTT
CAGGCCAGGGTGAATGGCGGGTCTTCCGAGGAGTTTGGGAGGCCGAGCGA
CCTTGTTGGTCGTGCTGGGTCTCTTGTTGACTCCGTTACTGGCTGAATCG
ACAGGTTCTGCTGCAGACGCCGCCAAAGCCGCGCGTCGTGAGCAGCTGTT
TCAGAAGGTTCGGGCTCAAGTGGACAAAATCCTGCAGAAAGCCATCCGCA
CCAAACGCAACGTTGTGCGGATCCGGGTGGGCTTTAAGGTATGCTCCACG
AAAGAGGCCCAGCCGGAGATACAGCGGCGTATCACTGACGCTGTTGACTC
AGGCCGCATCGGCGGCTTTAGCACCGAGCCGGGGTCGACGCGATTCGGGA
ACTTGGAGTACTACGCAGCCTATCGATTAACCATGGGGTTCCACGATGAT
CTGCGCAATGAAACATCCATGCGGTACACAGCAGTCAAAGACGACATTTT
TGTGAATGCCTCATCTGAGCTGGCGCTTGTGAGAGGAGTAGCCAAGGTGG
ACTTGGACGAGTTCAGGCCAGGGTGAATGGCGGGTCTTCCGAGGAGTTTG
GGAGGCCGAGCGACCTTGTTGGTCGTGCTGGGTCTCTTGTTGACTCCGTT
ACTGGCTGAATCGACAGGTTCTGCTGCAGACGCCGCCAAAGCCGCGCGTC
GTGAGCAGCTGTTTCAGAAGGTTCGGGCTCAAGTGGACAAAATCCTGCAG
AAAGCCATCCGCACCAAACGCAACGTTGTGCGGATCCGGGTGGGCTTTAA
GGTATGCTCCACGAAAGAGGCCCAGCCGGAGATACAGCGGCGTATCACTG
ACGCTGTTGACTCAGGCCGCATCGGCGGCTTTAGCACCGAGCCGGGGTCG
ACGCGATTCGGGAACTTGGAGTACTACGCAGCCTATCGATTAACCATGGG
GTTCCACGATGATCTGCGCAATGAAACATCCATGCGGTACACAGCAGTCA
AAGACGACATTTTTGTGAATGCCTCATCTGAGCTGGCGCTTGTGAGAGGA
GTAGCCAAGGTGGACTTGGACGAGTTCAGGCCAGGGTGAATGGCGGGTCT
TCCGAGGAGTTTGGGAGGCCGAGCGACCTTGTTGGTCGTGCTGGGTCTCT
TGTTGACTCCGTTACTGGCTGAATCGACAGGTTCTGCTGCAGACGCCGCC
AAAGCCGCGCGTCGTGAGCAGCTGTTTCAGAAGGTTCGGGCTCAAGTGGA
CAAAATCCTGCAGAAAGCCATCCGCACCAAACGCAACGTTGTGCGGATCC
GGGTGGGCTTTAAGGTATGCTCCACGAAAGAGGCCCAGCCGGAGATACAG
CGGCGTATCACTGACGCTGTTGACTCAGGCCGCATCGGCGGCTTTAGCAC
CGAGCCGGGGTCGACGCGATTCGGGAACTTGGAGTACTACGCAGCCTATC
GATTAACCATGGGGTTCCACGATGATCTGCGCAATGAAACATCCATGCGG
TACACAGCAGTCAAAGACGACATTTTTGTGAATGCCTCATCTGAGCTGGC
GCTTGTGAGAGGAGTAGCCAAGGTGGACTTGGACGAGTTCAGGCCAGGGT
GAATGGCGGGTCTTCCGAGGAGTTTGGGAGGCCGAGCGACCTTGTTGGTC
GTGCTGGGTCTCTTGTTGACTCCGTTACTGGCTGAATCGACAGGTTCTGC
TGCAGACGCCGCCAAAGCCGCGCGTCGTGAGCAGCTGTTTCAGAAGGTTC
GGGCTCAAGTGGACAAAATCCTGCAGAAAGCCATCCGCACCAAACGCAAC
GTTGTGCGGATCCGGGTGGGCTTTAAGGTATGCTCCACGAAAGAGGCCCA
GCCGGAGATACAGCGGCGTATCACTGACGCTGTTGACTCAGGCCGCATCG
GCGGCTTTAGCACCGAGCCGGGGTCGACGCGATTCGGGAACTTGGAGTAC
TACGCAGCCTATCGATTAACCATGGGGTTCCACGATGATCTGCGCAATGA
AACATCCATGCGGTACACAGCAGTCAAAGACGACATTTTTGTGAATGCCT
CATCTGAGCTGGCGCTTGTGAGAGGAGTAGCCAAGGTGGACTTGGACGAG
TTCAGGCCAGGGTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000054 | genome | Sc0000054:80753..85413 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97211_cuf12 |
| Biotype | protein_coding |
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