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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97190_cuf1 >transcript:BL97190_cuf1-protein ID=transcript:BL97190_cuf1-protein|Name=transcript:BL97190_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=270bp
TDTDDTGTGTDTGTGTDTGDTGTRTDTGDTGTGTDTGDTGTGTKSEAQNH
RPFTISFNGYVEQIVDLDEKKEFLVASVVIDFTWQDSRLKWDLKYYENIE
SLTVPASSIWTPTFTLKRNANPLYEGLPKDVPLRISLNGTVTWRVETLTT
TICEADPFFFPADTMTCDICFSAFSAIGEFIECEEGSACDVWSTAGPEGE
WNRKDKISARDNKEACFTLQLDRMPLFHLATTVGPCAILVVLMIITFIMP
IDRGDRISFGVTIQLSVVMC Run BLAST on NCBI mRNA from alignment at Sc0000069:1132949..1134965- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97190_cuf1 ID=transcript:BL97190_cuf1|Name=transcript:BL97190_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2017bp|location=Sequence derived from alignment at Sc0000069:1132949..1134965- (Branchiostoma lanceolatum)
ACTGACACCGATGACACTGGGACCGGGACCGACACTGGGACCGGGACTGA
CACAGGTGACACGGGGACCAGGACGGACACTGGTGACACTGGGACCGGGA
CTGACACTGGTGACACCGGGACCGGGACCAAGTCTGAGGCTCAGAACCAT
CGCCCGTTCACCATCAGCTTCAACGGCTATGTGGAACAGATCGTTGACTT
GGTAAGCTTCAGACTGTCTGTAACACATCTGAGATCCTTGCAGGTTTATA
TATGACTCATGCAGGCAACTAAACACAACTAAACACAACTAATCAATACT
ACAACTTTCATTTCAGGATGAAAAGAAGGAGTTCCTGGTTGCCTCTGTTG
TCATCGACTTTGTAAGTTAACCTATTTATGAACTTTTCATCATTCCAGTT
TCCATTCAAGTAATCTTGTCATGAAAATGTCTGAAAACTTTTTTCTATAG
TAATTGTTATGATATGCACAACAAAATCATTTTGTTTTGTTTCAGACTTG
GCAGGACAGCCGACTGAAGTGGGACCTAAAGTACTACGAGAACATTGAGA
GTCTCACCGTCCCAGCCAGCAGCATCTGGACCCCAACATTTACTCTAAAG
AGGAAGTATGTAGACTCCTTATCAATTGCTATCATTGAATCAAGATTTAA
TCATGTTAAATCTGCTTTTTCATACAGATAATTGTTCTAAAGATATTGTT
TTACTAGCAGGACGCGTGGTGTAGAGGTCTGCGTACTGGCCACTTGACTT
TCTGTTTTAAATGCTGTGGAGCCAGGGGTCCTGGGTTTGCGCCCAGGTCT
GGATATGACTGGAAAAGAGTCGCATCGTCTTTTTTGAGTTGGGCGTAAAG
CCATCGGCCCCATGTATGAGGCCGAGCTTTAGGCGTTAGTCTTTAGCGCC
AAACTTCTGCGCATAAAAAACAACAACACACTTATCCAGAAGATTAGGGG
TGACCCGGTGTGCTTGGGCAAAAATGCGAGCCGTAGCGAAACCGCAGCGC
ACTTACCACAAGCTCCTTGAAAAAGCATGGTGCTTCACCTCAATTGAGTA
TAACTGCTTTATCTTAAGCAGAAACAATATTCTGAATTTACAGTGCCTTA
GCTGAAGCTGAATAAGGGTCTTTATTATTTTCACACAACCAGGAAGTCTC
TGAAGAAGGTAGCCCTTAAAGGATAGTGTCTTTTTAAACCAACCCACGGA
AGATTACCAGAGTAATGGATTCAGACGCACAAGGAATATCATTCTAGTAG
TGAAAACAACATCTTAACTTTTTAATCCAACACTAGTCCAACACAACAAA
ATGAACAGCTCATGTGCGAGGGAACAGTGGTTGTCGGAAAATATGACACT
GACTAGTCTAAGTCAAGACTTTATTGGTTACTCCACAGTGCTAACCCTTT
GTACGAAGGCCTGCCAAAGGACGTACCACTCCGGATCAGCCTGAATGGTA
CGGTAACATGGAGGGTAGAAACTCTGACCACCACCATTTGTGAAGCAGAC
CCGTTCTTCTTCCCTGCTGACACCATGACATGCGACATCTGTTTCTCTGC
ATTTTCAGCAATTGGGGAATTCATTGGTAAAGCTTTACAAATATGTCATA
AAAAGATATTGATATCAATAATTATAAGTTTACCTCTCTTATGGATAAAG
AGTACTAGTTTCTCTGACTTATTTCAGTTTACTAGTATATGAATTGTAGA
ATGCCTAAACTTGTTTTATATAATTTTTAATGTGATTTGTTGGACACAGA
ATGCGAAGAGGGCAGCGCCTGTGACGTCTGGTCTACCGCAGGACCTGAGG
GTGAGTGGAATCGGAAGGACAAGATCTCCGCAAGAGACAACAAGGAGGCG
TGCTTCACTCTTCAGCTGGACAGGATGCCCCTGTTCCACCTCGCCACGAC
TGTCGGGCCCTGCGCCATCCTGGTGGTGCTGATGATCATCACCTTCATCA
TGCCCATAGACAGGGGAGACCGGATCTCCTTCGGAGTGACCATCCAACTC
TCTGTGGTCATGTGTCT Coding sequence (CDS) from alignment at Sc0000069:1132949..1134965- >transcript:BL97190_cuf1 ID=transcript:BL97190_cuf1|Name=transcript:BL97190_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=4050bp|location=Sequence derived from alignment at Sc0000069:1132949..1134965- (Branchiostoma lanceolatum)
ACTGACACCGATGACACTGGGACCGGGACCGACACTGGGACCGGGACTGA
CACAGGTGACACGGGGACCAGGACGGACACTGGTGACACTGGGACCGGGA
CTGACACTGGTGACACCGGGACCGGGACCAAGTCTGAGGCTCAGAACCAT
CGCCCGTTCACCATCAGCTTCAACGGCTATGTGGAACAGATCGTTGACTT
GGATGAAAAGAAGGAGTTCCTGGTTGCCTCTGTTGTCATCGACTTTACTT
GGCAGGACAGCCGACTGAAGTGGGACCTAAAGTACTACGAGAACATTGAG
AGTCTCACCGTCCCAGCCAGCAGCATCTGGACCCCAACATTTACTCTAAA
GAGGAATGCTAACCCTTTGTACGAAGGCCTGCCAAAGGACGTACCACTCC
GGATCAGCCTGAATGGTACGGTAACATGGAGGGTAGAAACTCTGACCACC
ACCATTTGTGAAGCAGACCCGTTCTTCTTCCCTGCTGACACCATGACATG
CGACATCTGTTTCTCTGCATTTTCAGCAATTGGGGAATTCATTGAATGCG
AAGAGGGCAGCGCCTGTGACGTCTGGTCTACCGCAGGACCTGAGGGTGAG
TGGAATCGGAAGGACAAGATCTCCGCAAGAGACAACAAGGAGGCGTGCTT
CACTCTTCAGCTGGACAGGATGCCCCTGTTCCACCTCGCCACGACTGTCG
GGCCCTGCGCCATCCTGGTGGTGCTGATGATCATCACCTTCATCATGCCC
ATAGACAGGGGAGACCGGATCTCCTTCGGAGTGACCATCCAACTCTCTGT
GGTCATGTGTACTGACACCGATGACACTGGGACCGGGACCGACACTGGGA
CCGGGACTGACACAGGTGACACGGGGACCAGGACGGACACTGGTGACACT
GGGACCGGGACTGACACTGGTGACACCGGGACCGGGACCAAGTCTGAGGC
TCAGAACCATCGCCCGTTCACCATCAGCTTCAACGGCTATGTGGAACAGA
TCGTTGACTTGGATGAAAAGAAGGAGTTCCTGGTTGCCTCTGTTGTCATC
GACTTTACTTGGCAGGACAGCCGACTGAAGTGGGACCTAAAGTACTACGA
GAACATTGAGAGTCTCACCGTCCCAGCCAGCAGCATCTGGACCCCAACAT
TTACTCTAAAGAGGAATGCTAACCCTTTGTACGAAGGCCTGCCAAAGGAC
GTACCACTCCGGATCAGCCTGAATGGTACGGTAACATGGAGGGTAGAAAC
TCTGACCACCACCATTTGTGAAGCAGACCCGTTCTTCTTCCCTGCTGACA
CCATGACATGCGACATCTGTTTCTCTGCATTTTCAGCAATTGGGGAATTC
ATTGAATGCGAAGAGGGCAGCGCCTGTGACGTCTGGTCTACCGCAGGACC
TGAGGGTGAGTGGAATCGGAAGGACAAGATCTCCGCAAGAGACAACAAGG
AGGCGTGCTTCACTCTTCAGCTGGACAGGATGCCCCTGTTCCACCTCGCC
ACGACTGTCGGGCCCTGCGCCATCCTGGTGGTGCTGATGATCATCACCTT
CATCATGCCCATAGACAGGGGAGACCGGATCTCCTTCGGAGTGACCATCC
AACTCTCTGTGGTCATGTGTACTGACACCGATGACACTGGGACCGGGACC
GACACTGGGACCGGGACTGACACAGGTGACACGGGGACCAGGACGGACAC
TGGTGACACTGGGACCGGGACTGACACTGGTGACACCGGGACCGGGACCA
AGTCTGAGGCTCAGAACCATCGCCCGTTCACCATCAGCTTCAACGGCTAT
GTGGAACAGATCGTTGACTTGGATGAAAAGAAGGAGTTCCTGGTTGCCTC
TGTTGTCATCGACTTTACTTGGCAGGACAGCCGACTGAAGTGGGACCTAA
AGTACTACGAGAACATTGAGAGTCTCACCGTCCCAGCCAGCAGCATCTGG
ACCCCAACATTTACTCTAAAGAGGAATGCTAACCCTTTGTACGAAGGCCT
GCCAAAGGACGTACCACTCCGGATCAGCCTGAATGGTACGGTAACATGGA
GGGTAGAAACTCTGACCACCACCATTTGTGAAGCAGACCCGTTCTTCTTC
CCTGCTGACACCATGACATGCGACATCTGTTTCTCTGCATTTTCAGCAAT
TGGGGAATTCATTGAATGCGAAGAGGGCAGCGCCTGTGACGTCTGGTCTA
CCGCAGGACCTGAGGGTGAGTGGAATCGGAAGGACAAGATCTCCGCAAGA
GACAACAAGGAGGCGTGCTTCACTCTTCAGCTGGACAGGATGCCCCTGTT
CCACCTCGCCACGACTGTCGGGCCCTGCGCCATCCTGGTGGTGCTGATGA
TCATCACCTTCATCATGCCCATAGACAGGGGAGACCGGATCTCCTTCGGA
GTGACCATCCAACTCTCTGTGGTCATGTGTACTGACACCGATGACACTGG
GACCGGGACCGACACTGGGACCGGGACTGACACAGGTGACACGGGGACCA
GGACGGACACTGGTGACACTGGGACCGGGACTGACACTGGTGACACCGGG
ACCGGGACCAAGTCTGAGGCTCAGAACCATCGCCCGTTCACCATCAGCTT
CAACGGCTATGTGGAACAGATCGTTGACTTGGATGAAAAGAAGGAGTTCC
TGGTTGCCTCTGTTGTCATCGACTTTACTTGGCAGGACAGCCGACTGAAG
TGGGACCTAAAGTACTACGAGAACATTGAGAGTCTCACCGTCCCAGCCAG
CAGCATCTGGACCCCAACATTTACTCTAAAGAGGAATGCTAACCCTTTGT
ACGAAGGCCTGCCAAAGGACGTACCACTCCGGATCAGCCTGAATGGTACG
GTAACATGGAGGGTAGAAACTCTGACCACCACCATTTGTGAAGCAGACCC
GTTCTTCTTCCCTGCTGACACCATGACATGCGACATCTGTTTCTCTGCAT
TTTCAGCAATTGGGGAATTCATTGAATGCGAAGAGGGCAGCGCCTGTGAC
GTCTGGTCTACCGCAGGACCTGAGGGTGAGTGGAATCGGAAGGACAAGAT
CTCCGCAAGAGACAACAAGGAGGCGTGCTTCACTCTTCAGCTGGACAGGA
TGCCCCTGTTCCACCTCGCCACGACTGTCGGGCCCTGCGCCATCCTGGTG
GTGCTGATGATCATCACCTTCATCATGCCCATAGACAGGGGAGACCGGAT
CTCCTTCGGAGTGACCATCCAACTCTCTGTGGTCATGTGTACTGACACCG
ATGACACTGGGACCGGGACCGACACTGGGACCGGGACTGACACAGGTGAC
ACGGGGACCAGGACGGACACTGGTGACACTGGGACCGGGACTGACACTGG
TGACACCGGGACCGGGACCAAGTCTGAGGCTCAGAACCATCGCCCGTTCA
CCATCAGCTTCAACGGCTATGTGGAACAGATCGTTGACTTGGATGAAAAG
AAGGAGTTCCTGGTTGCCTCTGTTGTCATCGACTTTACTTGGCAGGACAG
CCGACTGAAGTGGGACCTAAAGTACTACGAGAACATTGAGAGTCTCACCG
TCCCAGCCAGCAGCATCTGGACCCCAACATTTACTCTAAAGAGGAATGCT
AACCCTTTGTACGAAGGCCTGCCAAAGGACGTACCACTCCGGATCAGCCT
GAATGGTACGGTAACATGGAGGGTAGAAACTCTGACCACCACCATTTGTG
AAGCAGACCCGTTCTTCTTCCCTGCTGACACCATGACATGCGACATCTGT
TTCTCTGCATTTTCAGCAATTGGGGAATTCATTGAATGCGAAGAGGGCAG
CGCCTGTGACGTCTGGTCTACCGCAGGACCTGAGGGTGAGTGGAATCGGA
AGGACAAGATCTCCGCAAGAGACAACAAGGAGGCGTGCTTCACTCTTCAG
CTGGACAGGATGCCCCTGTTCCACCTCGCCACGACTGTCGGGCCCTGCGC
CATCCTGGTGGTGCTGATGATCATCACCTTCATCATGCCCATAGACAGGG
GAGACCGGATCTCCTTCGGAGTGACCATCCAACTCTCTGTGGTCATGTGT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000069 | genome | Sc0000069:1132949..1134965 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97190_cuf1 |
| Biotype | protein_coding |
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