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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97184_cuf1 >transcript:BL97184_cuf1-protein ID=transcript:BL97184_cuf1-protein|Name=transcript:BL97184_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=229bp
MQFDVEQRPNPPPLQRYLSAPEFWEKRRMRVNYRCTTNCMAEALGIPVRG
RGMGVFPGLGPGGKAVADYIDALESEFALVLIYERLNQSLVLLKRHMCWT
IRDILYDVGFKEPPANQRDASDESKKLQFRRVNGADHLLYYHFYDIFRAK
VAAEGEDFKREVRHYERVLDKVSRYCSSAINDWKVANQTVIWESEWNEEF
VVTRRMCWEIRRKRDDWDKLFRERYSSRS Run BLAST on NCBI mRNA from alignment at Sc0000032:102215..104898+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97184_cuf1 ID=transcript:BL97184_cuf1|Name=transcript:BL97184_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2684bp|location=Sequence derived from alignment at Sc0000032:102215..104898+ (Branchiostoma lanceolatum)
ATACCATTCATCAAACAACAGAAATCATGACTAGATGATAATTGAAATAA
CGATAACTTTATAGAACAGTAATATTGTGTCATAATGATAGGAAATCAAA
TCCATTTGTTCAGATAACGTTAGATTTCCGTTTAACCACGGGACTTTATT
TTCTGGACTCATGTCATAACATCGCACATCCATGATGATTGCTTTTGCAA
TGTCACAGCAATATTCGTATTCGCACAAGGTTTCAGATATCCGCAGTTGA
ACAAAGAAGAGATGTACAGGAAAATGTAAAACACGACATCTCCAAGTTGT
TGTGTGATTGTCTTTACATCTTGACCAAGAAACATGAATTGGGTGCTTTG
ATTTCATTTTGATTTTATCAGGATTGCAACAGTCCAATACACGTTGGACA
CAGGCGTGGGTGCTTTAAGATACTTATAAAGCTAAGCTAATACAGTTTTT
AGGTTCCCAATAGGACTTCGAAGTCAACACTGTTGGACATCCCTCTATCT
TAAAGTACGTGTCTTATTCTGTACCACCAGGTGCGCTACAACCGCGACGC
GCTGCACAAGATAGTCAAGAGAAACGCCCAGTACGTCACCATCTTGAGGA
ACCCCCTGGATCGGTTTGAGACGGATTTCGTCTCCTCCCACTTGGAGATG
CAGTTCGACGTCGAGCAGAGACCGAACCCGCCTCCGCTGCAGAGGTACCA
GTATCTGTATTTGTGCATGGCCGGTAACCGCCCTTCGGCGTAATACATCA
GAATCTGTATGGATGTTTCACTGCCCTTGGGTGTGAGGCACCAGCTTCTG
TATCTGTATAGCTGGTATAACCAGCCTTTGGGGTAACACACCAGCTTCTG
TATCTGTATAGCTGGTATAACCAGCCTTTGAAGTAACACACCAGCTTCTG
TATCTGTATCTATATAGCCGGTATAACCACCCTTCGGTAAAACACACAAG
CTTCTGTATGACTATCTGTATCTGTATAGCCGATATAATTGTTCTTCGGC
ATACCACACCAGCTGCACAGGCACGAGGTGCGGCCAGCAGCTGGTTATAC
TACACCGAATGGCCTGTCACACATAGCCTTTGCACAACAAGCTATAGCTG
TTAGCGTTCTTCAAAGCTACCTAGTGCGGATGCATCTACTATACTTGGTG
GCAACGAAGTCACTCTACACTAGTTATAGGGTGAAACGAATTTTTGAACC
CCTCAATTCGAGGTTGATAACTCTGGTGCTTGAAAGCATGACTCTTTCTT
GTCTACTGTCTCTATTTCTAGGTACCTGAGCGCTCCGGAGTTCTGGGAAA
AGAGACGCATGCGCGTGAACTACCGCTGCACCACTAACTGCATGGCCGAG
GCCTTGGGCATTCCCGTCCGCGGACGCGGCATGGGAGTCTTCCCCGGACT
CGGACCGGGCGGCAAGGCCGTGGCGGACTACATCGACGCGTTAGAGTCAG
AGTTCGCCCTGGTCCTGATCTACGAGCGGCTCAACCAGTCCCTGGTGCTG
CTGAAGAGGCACATGTGCTGGACCATCCGGGACATTCTCTATGACGTGGG
ATTCAAGGAGCCGCCGGCCAATCAGAGAGACGCAAGCGACGAATCCAAGA
AACTGCAGTTCCGACGAGTGAACGGCGCCGACCACCTACTGTATTACCAC
TTCTACGACATCTTCAGGGCCAAGGTTGCCGCGGAGGGTGAAGACTTCAA
GCGCGAGGTCAGGCATTACGAGCGCGTTTTAGACAAGGTGTCGCGGTATT
GCAGTTCTGCCATAAACGACTGGAAGGTGGCCAACCAGACGGTGATTTGG
GAGAGCGAGTGGAATGAGGAGTTCGTGGTGACGCGGCGGATGTGCTGGGA
GATCAGGAGGAAGAGAGACGACTGGGATAAACTGTTCAGGGAGCGGTACA
GTTCAAGGTCGTAAGGCAACAACTAACGTTGGGAGTCCAAGAGATTAGGT
CGATGAGAGGCTATTGACAGTCTCCCGGGGATCTCTCAAAGATTCTTCAA
TGATCTGTCAGATCTTTCAGTATGTTATGTTACGTCATGTTACGTTACGT
AACGTTGTGTTATGTTATGTTATGTTATGTTATGTTATGTTACGTAACTG
TTGAACAGAAACTAGTCTTTTGCATCTTTTGATGTTGTACATAGGTGAAG
GTTCCTTACAGAGATAATGCTTCTAAGACTAAGAGACGGATGAGTGTCCA
ATTTGGCATACCCTTTATGATCATGAGTCATACAGTGAGCGCCCATTGAT
ATTTCAATTATATTCAAGGTCTCTGTATGATCTGTCAATGACCGTTGAGT
TTGGCATTTGGCTTTTGTTTGTTGGCAGACTTGGCACCCAATGGTCTCGT
TCTGCATCCTTTATATATGGGGTTAAAGGCACTAGTCTGGAACAAATGGT
GCTTGATAAGAGTTTATGGCGTTGTCGTCAAACCCATTGTATGCAATTTA
CTGTTTTACGCTTTACTATTTGTAAAAAGAACTTGGACATATCATTTTGT
GCTGTTGCCGTCAAAGCAATATATAAATATATATACATATCACTGTTAAA
ACAAAAGTACGCTTTAGTACTCATGAACAACCCGAATTTATCATTTTGTG
GTGAAGCCTACAAAGTCGTTTTGTGTATATATGTATATACATATAACAAG
TTATGTACAAAGGTACGCTTTAGTTGAAACCAAT Coding sequence (CDS) from alignment at Sc0000032:102215..104898+ >transcript:BL97184_cuf1 ID=transcript:BL97184_cuf1|Name=transcript:BL97184_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1380bp|location=Sequence derived from alignment at Sc0000032:102215..104898+ (Branchiostoma lanceolatum)
ATGCAGTTCGACGTCGAGCAGAGACCGAACCCGCCTCCGCTGCAGAGGTA
CCTGAGCGCTCCGGAGTTCTGGGAAAAGAGACGCATGCGCGTGAACTACC
GCTGCACCACTAACTGCATGGCCGAGGCCTTGGGCATTCCCGTCCGCGGA
CGCGGCATGGGAGTCTTCCCCGGACTCGGACCGGGCGGCAAGGCCGTGGC
GGACTACATCGACGCGTTAGAGTCAGAGTTCGCCCTGGTCCTGATCTACG
AGCGGCTCAACCAGTCCCTGGTGCTGCTGAAGAGGCACATGTGCTGGACC
ATCCGGGACATTCTCTATGACGTGGGATTCAAGGAGCCGCCGGCCAATCA
GAGAGACGCAAGCGACGAATCCAAGAAACTGCAGTTCCGACGAGTGAACG
GCGCCGACCACCTACTGTATTACCACTTCTACGACATCTTCAGGGCCAAG
GTTGCCGCGGAGGGTGAAGACTTCAAGCGCGAGGTCAGGCATTACGAGCG
CGTTTTAGACAAGGTGTCGCGGTATTGCAGTTCTGCCATAAACGACTGGA
AGGTGGCCAACCAGACGGTGATTTGGGAGAGCGAGTGGAATGAGGAGTTC
GTGGTGACGCGGCGGATGTGCTGGGAGATCAGGAGGAAGAGAGACGACTG
GGATAAACTGTTCAGGGAGCGGTACAGTTCAAGGTCGTAAATGCAGTTCG
ACGTCGAGCAGAGACCGAACCCGCCTCCGCTGCAGAGGTACCTGAGCGCT
CCGGAGTTCTGGGAAAAGAGACGCATGCGCGTGAACTACCGCTGCACCAC
TAACTGCATGGCCGAGGCCTTGGGCATTCCCGTCCGCGGACGCGGCATGG
GAGTCTTCCCCGGACTCGGACCGGGCGGCAAGGCCGTGGCGGACTACATC
GACGCGTTAGAGTCAGAGTTCGCCCTGGTCCTGATCTACGAGCGGCTCAA
CCAGTCCCTGGTGCTGCTGAAGAGGCACATGTGCTGGACCATCCGGGACA
TTCTCTATGACGTGGGATTCAAGGAGCCGCCGGCCAATCAGAGAGACGCA
AGCGACGAATCCAAGAAACTGCAGTTCCGACGAGTGAACGGCGCCGACCA
CCTACTGTATTACCACTTCTACGACATCTTCAGGGCCAAGGTTGCCGCGG
AGGGTGAAGACTTCAAGCGCGAGGTCAGGCATTACGAGCGCGTTTTAGAC
AAGGTGTCGCGGTATTGCAGTTCTGCCATAAACGACTGGAAGGTGGCCAA
CCAGACGGTGATTTGGGAGAGCGAGTGGAATGAGGAGTTCGTGGTGACGC
GGCGGATGTGCTGGGAGATCAGGAGGAAGAGAGACGACTGGGATAAACTG
TTCAGGGAGCGGTACAGTTCAAGGTCGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000032 | genome | Sc0000032:102215..104898 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97184_cuf1 |
| Biotype | protein_coding |
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