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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97181_cuf1 >transcript:BL97181_cuf1-protein ID=transcript:BL97181_cuf1-protein|Name=transcript:BL97181_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=184bp
NIMQLVLVTDAAANEIGFKIHFEEFFLPDGFCMDPGVPISGYRNGDNFTV
GSVVSFGCDDGFTMKGRMNHTCITGGVKGWDVNDLPTCGAECGGDIYGRR
FGVVYSPYYPGDYGSNMNCTWTIEVNSGGRVKLTPEIFDLEGRDYLFIYD
GGGALLGNYSRGIDKIPEDIHSTSNTVRLVLTTD Run BLAST on NCBI mRNA from alignment at Sc0000511:50135..51774+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97181_cuf1 ID=transcript:BL97181_cuf1|Name=transcript:BL97181_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=1640bp|location=Sequence derived from alignment at Sc0000511:50135..51774+ (Branchiostoma lanceolatum)
CCAACATCATGCAGCTTGTCCTCGTTACTGACGCCGCTGCCAATGAGATC
GGTTTCAAGATTCACTTCGAAGGTAATGATAGCAAGAACTATATGATGTA
CAGATTCAAGATGTATAATGTATGAATAATGCCGAATAAAAGTAAAAATT
ACGAGGTTAATTTACATCAAACGGTCTAATTTACATAAATTCAGTTTTAA
TCCACATGGACAATAGCGCACAGAAGATTGAAATTCAACATAGACTCACA
TGATTCCTGCAAAGAAGAAAAAAGATATGCAATTCTGAACTTTCAGGTTT
AATATATTTGATTTCAATTTTTTATCATTATTGGAAATTAGAATTTTTCT
TACCGGATGGATTTTGCATGGACCCCGGCGTTCCGATAAGTGGCTACAGG
AATGGAGACAATTTCACAGTAGGATCGGTTGTTTCCTTTGGATGCGATGA
CGGCTTTACAATGAAAGGCCGGATGAACCACACCTGCATAACTGGTGGTG
TAAAAGGTTGGGACGTTAACGACCTACCGACGTGTGGAGGTATGTTTTCG
CTCAGTAACCTGGAAATATTCTTTAGAATTATTCAATAATTTTTGTGCTC
CGTCCGTATGTGCTAGTCACTGTACACTGGCAAGAACCTTAGGTCTAAAT
ACCAGTTAACGCAATTCAAATTTAGGGCCGCTAGATATAGAAAGACTACA
CTACCTTACCTGGTTGACCTTCTCAATAACAAAGTGTTAGCGCCGATCGA
AGATAAGCACTTAGTAAGTATATATTTTAAATCGAGTGTTGTTAAGGTAT
GTGATATTTTACAGTATGTATATCTGTTTGCTTTTAGACTGATTGTAAGA
CATACTTCACTTCAACCAGCTAGGCTGCTATTGTATGTTGTGTCATGGGA
CGTCAATAAACCATTCATATAGTATTTAGATTTTGTACGGATGAGTTGAA
TATAATCTCCTTCTATGTAGCTGAATGTGGTGGCGACATATATGGACGGC
GTTTTGGGGTAGTTTACTCTCCCTACTATCCCGGTGATTACGGCAGCAAC
ATGAACTGCACCTGGACCATAGAGGTCAACTCGGGGGGAAGGGTGAAGCT
TACGCCAGAAATATTCGATTTAGAAGGGCGCGATTATCTTTTCATCTACG
ACGGAGGCGGCGCCTTGTTGGGAAACTACTCGAGTACGCTAATTCATTTT
GTTGCGGATGAAATTGAATATAAAATTAGTTGTTGGATTTGGCATTTCTA
AGGCATGGACTGTGGAAAAGTAAACGTCCTAGTGTTTCTGTGGATGGCAT
AGGGCCATACAGTGATCCATACATTTCGGCATCTTCTATACATAAAAATA
AGATATTTGGCATTCGTAACCGTTTATTGTAGCCACAGTGATGTTTGATT
ATAGTTGTGTTGCTCTTTGATAAGACTGATAAGATCATTTAACATTGACA
ATGATTTCCACATGGTCTGCATAAAGCACTAGATTGTGTTTAAATTACAT
CCTTACGCCAATCTGATAATTGATTATGATTACCATCTGATTCTTTGCCT
ACTCAACTCACTTAAACAGGAGGAATTGATAAAATTCCCGAAGACATTCA
CTCTACATCAAACACAGTCCGCCTTGTCCTCACTACCGAC Coding sequence (CDS) from alignment at Sc0000511:50135..51774+ >transcript:BL97181_cuf1 ID=transcript:BL97181_cuf1|Name=transcript:BL97181_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=2208bp|location=Sequence derived from alignment at Sc0000511:50135..51774+ (Branchiostoma lanceolatum)
AACATCATGCAGCTTGTCCTCGTTACTGACGCCGCTGCCAATGAGATCGG
TTTCAAGATTCACTTCGAAGAATTTTTCTTACCGGATGGATTTTGCATGG
ACCCCGGCGTTCCGATAAGTGGCTACAGGAATGGAGACAATTTCACAGTA
GGATCGGTTGTTTCCTTTGGATGCGATGACGGCTTTACAATGAAAGGCCG
GATGAACCACACCTGCATAACTGGTGGTGTAAAAGGTTGGGACGTTAACG
ACCTACCGACGTGTGGAGCTGAATGTGGTGGCGACATATATGGACGGCGT
TTTGGGGTAGTTTACTCTCCCTACTATCCCGGTGATTACGGCAGCAACAT
GAACTGCACCTGGACCATAGAGGTCAACTCGGGGGGAAGGGTGAAGCTTA
CGCCAGAAATATTCGATTTAGAAGGGCGCGATTATCTTTTCATCTACGAC
GGAGGCGGCGCCTTGTTGGGAAACTACTCGAGAGGAATTGATAAAATTCC
CGAAGACATTCACTCTACATCAAACACAGTCCGCCTTGTCCTCACTACCG
ACAACATCATGCAGCTTGTCCTCGTTACTGACGCCGCTGCCAATGAGATC
GGTTTCAAGATTCACTTCGAAGAATTTTTCTTACCGGATGGATTTTGCAT
GGACCCCGGCGTTCCGATAAGTGGCTACAGGAATGGAGACAATTTCACAG
TAGGATCGGTTGTTTCCTTTGGATGCGATGACGGCTTTACAATGAAAGGC
CGGATGAACCACACCTGCATAACTGGTGGTGTAAAAGGTTGGGACGTTAA
CGACCTACCGACGTGTGGAGCTGAATGTGGTGGCGACATATATGGACGGC
GTTTTGGGGTAGTTTACTCTCCCTACTATCCCGGTGATTACGGCAGCAAC
ATGAACTGCACCTGGACCATAGAGGTCAACTCGGGGGGAAGGGTGAAGCT
TACGCCAGAAATATTCGATTTAGAAGGGCGCGATTATCTTTTCATCTACG
ACGGAGGCGGCGCCTTGTTGGGAAACTACTCGAGAGGAATTGATAAAATT
CCCGAAGACATTCACTCTACATCAAACACAGTCCGCCTTGTCCTCACTAC
CGACAACATCATGCAGCTTGTCCTCGTTACTGACGCCGCTGCCAATGAGA
TCGGTTTCAAGATTCACTTCGAAGAATTTTTCTTACCGGATGGATTTTGC
ATGGACCCCGGCGTTCCGATAAGTGGCTACAGGAATGGAGACAATTTCAC
AGTAGGATCGGTTGTTTCCTTTGGATGCGATGACGGCTTTACAATGAAAG
GCCGGATGAACCACACCTGCATAACTGGTGGTGTAAAAGGTTGGGACGTT
AACGACCTACCGACGTGTGGAGCTGAATGTGGTGGCGACATATATGGACG
GCGTTTTGGGGTAGTTTACTCTCCCTACTATCCCGGTGATTACGGCAGCA
ACATGAACTGCACCTGGACCATAGAGGTCAACTCGGGGGGAAGGGTGAAG
CTTACGCCAGAAATATTCGATTTAGAAGGGCGCGATTATCTTTTCATCTA
CGACGGAGGCGGCGCCTTGTTGGGAAACTACTCGAGAGGAATTGATAAAA
TTCCCGAAGACATTCACTCTACATCAAACACAGTCCGCCTTGTCCTCACT
ACCGACAACATCATGCAGCTTGTCCTCGTTACTGACGCCGCTGCCAATGA
GATCGGTTTCAAGATTCACTTCGAAGAATTTTTCTTACCGGATGGATTTT
GCATGGACCCCGGCGTTCCGATAAGTGGCTACAGGAATGGAGACAATTTC
ACAGTAGGATCGGTTGTTTCCTTTGGATGCGATGACGGCTTTACAATGAA
AGGCCGGATGAACCACACCTGCATAACTGGTGGTGTAAAAGGTTGGGACG
TTAACGACCTACCGACGTGTGGAGCTGAATGTGGTGGCGACATATATGGA
CGGCGTTTTGGGGTAGTTTACTCTCCCTACTATCCCGGTGATTACGGCAG
CAACATGAACTGCACCTGGACCATAGAGGTCAACTCGGGGGGAAGGGTGA
AGCTTACGCCAGAAATATTCGATTTAGAAGGGCGCGATTATCTTTTCATC
TACGACGGAGGCGGCGCCTTGTTGGGAAACTACTCGAGAGGAATTGATAA
AATTCCCGAAGACATTCACTCTACATCAAACACAGTCCGCCTTGTCCTCA
CTACCGAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000511 | genome | Sc0000511:50135..51774 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97181_cuf1 |
| Biotype | protein_coding |
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