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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97178_cuf2 >transcript:BL97178_cuf2-protein ID=transcript:BL97178_cuf2-protein|Name=transcript:BL97178_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=194bp
HSGPAPAGRRLKRASERYLDTQPQSGDMHSGPAPAGRRLKRASEKYHDTQ
ACDGINDCSTGKDEANCEEMECVLRCETESGDPCIPKRWICDNTADCLHG
EDEEECKNEKASRGCFFKCMNTAAFVAEICVPPHQLADGQENCRQGEDED
PRQVELALETWFGSCSYDCPSVYGNASCVPDLFVCDGTADCLGE Run BLAST on NCBI mRNA from alignment at Sc0000050:127167..129074- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97178_cuf2 ID=transcript:BL97178_cuf2|Name=transcript:BL97178_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=1908bp|location=Sequence derived from alignment at Sc0000050:127167..129074- (Branchiostoma lanceolatum)
TGCACTCCGGACCCGCTCCAGCCGGCAGGAGGTTGAAGAGAGCCTCTGAA
AGGTACCTCGACACCCAGCCTCAATCCGGTGACATGCACTCCGGACCCGC
TCCAGCCGGCAGGAGGTTGAAGAGAGCCTCTGAAAAATACCACGACACCC
AGGCTTGTGACGGCATCAATGACTGCTCGACGGGAAAGGACGAGGCTAAC
TGTGAAGAAATGGGTAAGTCGGCCAAGTTCAATGTCCTCATATGCCCTCA
ATTAGACATAGCAAAACTATGCTGGTCTAGATATTTACATGTACAAAAAA
GAAGTCGAACACAGTAACTTATTATTGTACGACTAACAGTTATGGTTATT
AGATCTAAAACGCTTTTTTCTTTCTTCCGACCTTCCTTGTTATTAATGTA
TAATGAGCATATTTTCCTTCTCTGTTACTAGAACTCAAGCATTCATTATC
ATTTTATCACGAACATCCACATGTATTCCATTTTTGTATACAGTTAACTA
GATCATTCATTTATTCATTCATTCATTCATTCATTCACTTATTCATTCAT
TGTTCCCGTGACAGAGTGTGTGCTGCGCTGTGAGACGGAGTCAGGTGACC
CGTGTATTCCCAAGAGATGGATCTGTGACAACACCGCGGACTGTCTGCAT
GGGGAGGATGAAGAGGAGTGCAAGAATGAGAAAGGTAAATATCAGATTGG
TTACTAATGAAGATAGTTACATGTAAACCCATCACCTTCAACTTGCCCCA
TCCTCATCTTGAGGGTCGGGGACCATGGTCGCCTTCAGCACAAGCTTCCT
CCATCCTTCCCTGTCCTACGTCCTCTGTGTATAGTTTGCCAGTGACCTTC
CTGTCCAGTCCCTGATGCCATCTCCCCATCTCCTGTGTGGCCTCCCCTGC
TTCTGGTGCCACAGATCTTCCCTTTACCTTAACATTGGTGAATAGTTTAA
TCAGGTTAATGATCTCTGGTTATAGAGACCATTAACATACAAGCAATGTC
TTTCACATGCCGACGCTTCGATGGACCGCTGCCTATTTCACGGAGGTATG
AAATCTTCAACTTCTTATATTTCCTGCAGCATCCAGGGGCTGCTTTTTCA
AGTGTATGAACACAGCCGCTTTTGTGGCGGAGATTTGCGTCCCACCACAC
CAGCTAGCGGACGGCCAGGAGAACTGCAGGCAGGGAGAAGACGAAGATCC
AAGACAGGGTAAGAGGTAACCTGGTCTTCGGTGTCTAGCGGCCCATAGGT
CAGCAGGTTTACTATAGCAGGGTATATTTTTACTGGGAGGGGTTGCTAGC
CCTCCCCCCTTTAACGTGCTCGAGGCAACTCCTCAAACACAAGACCCCCA
TTTTACGCCCCTTCCGAAAGACGGGTGCAGCCCCAACCGAGATGCTCCTC
CCAGGATTTGAACCTGGGTCTCCAGTCTCTCCCAGGGCTGTAGGCTTGGT
TTTATCGGCACTGTAAGCTTCTGTCCCGCCTGTCCAACTTAGCCAACATC
GGAGACTTGACCAGTCTCTCCAAGGGCAGTTATACTAGTGGAGCATCCCT
GTAGTTCTACAGTACTGGTACATAGTAGCAGACTCACAATAATAACTAAA
AATATAACCTGCTACAGAAACGGAAAGGAAACATGCTGCCCTATGTGCCA
CTAGACACTACAGGGGCCTGAACGAAGGAACGAACGAAGTCTTCTATTAG
TATACATACTCCAACCTTTTGGACTCTATCTGTAACTGCTAAAAACTGGT
CCTGGCTGACGATTGTACGAATTTTGGATTACAGTTGAACTGGCTCTGGA
AACCTGGTTCGGTTCCTGTAGCTACGACTGCCCGTCCGTCTACGGTAACG
CGTCCTGCGTCCCGGACTTGTTCGTCTGTGACGGGACCGCCGACTGCTTG
GGCGAGGA Coding sequence (CDS) from alignment at Sc0000050:127167..129074- >transcript:BL97178_cuf2 ID=transcript:BL97178_cuf2|Name=transcript:BL97178_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=2328bp|location=Sequence derived from alignment at Sc0000050:127167..129074- (Branchiostoma lanceolatum)
CACTCCGGACCCGCTCCAGCCGGCAGGAGGTTGAAGAGAGCCTCTGAAAG
GTACCTCGACACCCAGCCTCAATCCGGTGACATGCACTCCGGACCCGCTC
CAGCCGGCAGGAGGTTGAAGAGAGCCTCTGAAAAATACCACGACACCCAG
GCTTGTGACGGCATCAATGACTGCTCGACGGGAAAGGACGAGGCTAACTG
TGAAGAAATGGAGTGTGTGCTGCGCTGTGAGACGGAGTCAGGTGACCCGT
GTATTCCCAAGAGATGGATCTGTGACAACACCGCGGACTGTCTGCATGGG
GAGGATGAAGAGGAGTGCAAGAATGAGAAAGCATCCAGGGGCTGCTTTTT
CAAGTGTATGAACACAGCCGCTTTTGTGGCGGAGATTTGCGTCCCACCAC
ACCAGCTAGCGGACGGCCAGGAGAACTGCAGGCAGGGAGAAGACGAAGAT
CCAAGACAGGTTGAACTGGCTCTGGAAACCTGGTTCGGTTCCTGTAGCTA
CGACTGCCCGTCCGTCTACGGTAACGCGTCCTGCGTCCCGGACTTGTTCG
TCTGTGACGGGACCGCCGACTGCTTGGGCGAGCACTCCGGACCCGCTCCA
GCCGGCAGGAGGTTGAAGAGAGCCTCTGAAAGGTACCTCGACACCCAGCC
TCAATCCGGTGACATGCACTCCGGACCCGCTCCAGCCGGCAGGAGGTTGA
AGAGAGCCTCTGAAAAATACCACGACACCCAGGCTTGTGACGGCATCAAT
GACTGCTCGACGGGAAAGGACGAGGCTAACTGTGAAGAAATGGAGTGTGT
GCTGCGCTGTGAGACGGAGTCAGGTGACCCGTGTATTCCCAAGAGATGGA
TCTGTGACAACACCGCGGACTGTCTGCATGGGGAGGATGAAGAGGAGTGC
AAGAATGAGAAAGCATCCAGGGGCTGCTTTTTCAAGTGTATGAACACAGC
CGCTTTTGTGGCGGAGATTTGCGTCCCACCACACCAGCTAGCGGACGGCC
AGGAGAACTGCAGGCAGGGAGAAGACGAAGATCCAAGACAGGTTGAACTG
GCTCTGGAAACCTGGTTCGGTTCCTGTAGCTACGACTGCCCGTCCGTCTA
CGGTAACGCGTCCTGCGTCCCGGACTTGTTCGTCTGTGACGGGACCGCCG
ACTGCTTGGGCGAGCACTCCGGACCCGCTCCAGCCGGCAGGAGGTTGAAG
AGAGCCTCTGAAAGGTACCTCGACACCCAGCCTCAATCCGGTGACATGCA
CTCCGGACCCGCTCCAGCCGGCAGGAGGTTGAAGAGAGCCTCTGAAAAAT
ACCACGACACCCAGGCTTGTGACGGCATCAATGACTGCTCGACGGGAAAG
GACGAGGCTAACTGTGAAGAAATGGAGTGTGTGCTGCGCTGTGAGACGGA
GTCAGGTGACCCGTGTATTCCCAAGAGATGGATCTGTGACAACACCGCGG
ACTGTCTGCATGGGGAGGATGAAGAGGAGTGCAAGAATGAGAAAGCATCC
AGGGGCTGCTTTTTCAAGTGTATGAACACAGCCGCTTTTGTGGCGGAGAT
TTGCGTCCCACCACACCAGCTAGCGGACGGCCAGGAGAACTGCAGGCAGG
GAGAAGACGAAGATCCAAGACAGGTTGAACTGGCTCTGGAAACCTGGTTC
GGTTCCTGTAGCTACGACTGCCCGTCCGTCTACGGTAACGCGTCCTGCGT
CCCGGACTTGTTCGTCTGTGACGGGACCGCCGACTGCTTGGGCGAGCACT
CCGGACCCGCTCCAGCCGGCAGGAGGTTGAAGAGAGCCTCTGAAAGGTAC
CTCGACACCCAGCCTCAATCCGGTGACATGCACTCCGGACCCGCTCCAGC
CGGCAGGAGGTTGAAGAGAGCCTCTGAAAAATACCACGACACCCAGGCTT
GTGACGGCATCAATGACTGCTCGACGGGAAAGGACGAGGCTAACTGTGAA
GAAATGGAGTGTGTGCTGCGCTGTGAGACGGAGTCAGGTGACCCGTGTAT
TCCCAAGAGATGGATCTGTGACAACACCGCGGACTGTCTGCATGGGGAGG
ATGAAGAGGAGTGCAAGAATGAGAAAGCATCCAGGGGCTGCTTTTTCAAG
TGTATGAACACAGCCGCTTTTGTGGCGGAGATTTGCGTCCCACCACACCA
GCTAGCGGACGGCCAGGAGAACTGCAGGCAGGGAGAAGACGAAGATCCAA
GACAGGTTGAACTGGCTCTGGAAACCTGGTTCGGTTCCTGTAGCTACGAC
TGCCCGTCCGTCTACGGTAACGCGTCCTGCGTCCCGGACTTGTTCGTCTG
TGACGGGACCGCCGACTGCTTGGGCGAG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000050 | genome | Sc0000050:127167..129074 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97178_cuf2 |
| Biotype | protein_coding |
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