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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97153_cuf0 >transcript:BL97153_cuf0-protein ID=transcript:BL97153_cuf0-protein|Name=transcript:BL97153_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=150bp
MLDFTACAAFKGHDIWVGVILYNCVPRTYFKLGQYTRNSPTMRGKIHYIM YEGGETRTGVAIRHMRDTSDFRDGVPGAAVILTDGQTSDDYAYEAGAARA AGVDLYAVGVGFPAFVDQAALETITDYSDRVFDTTQPCVVAQKIVDDLCG Run BLAST on NCBI mRNA from alignment at Sc0000600:46962..49803- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97153_cuf0 ID=transcript:BL97153_cuf0|Name=transcript:BL97153_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2842bp|location=Sequence derived from alignment at Sc0000600:46962..49803- (Branchiostoma lanceolatum) GCTCTTTCCCAGACCTTAGAACCACAATTAGGATGATTCGATTCCAAATT
AAGGATGGCAATTATTCACGCTGTCTTGATTTGAGGGATAGCATCCAACC
GGGTTTATATTAACGAGAAATCAAATACTCGTGGAACAAGAGGCAAAGAT
ATCTAGGACCGGACAACACTGTCATTCATAATGATACCTGACCTAGGCAT
GGCCTATTGGAATTTAGTAATAAGCACTTAGCAAACACCGTGTAGTGGGC
AAAATATGTTCCAGTCAAACGTTATAAAACGAGATGTACAGAAAGATCCA
TCATCTCTTTATCTGAAACAGCTTGCATCGCTGACATTGTTCTCGTCCTC
GACCTTTCTTCGAGCATCCCGCGGACTCAGTTCGCCCTCGCCCGGGACTT
CATGCTGGATTTCACGGCATGTGCGGCTTTCAAGGGCCATGACATATGGG
TGAGTCGTTGATTTGTACTATCGTTACTAACCGTAGAACCAACAGTCCAC
AAACTTCTTTTCTTAAGCCACTTTAGAGGCGTGCAGACATGTTAAAAGTT
AGTCCTCACCGCACCAAACGGTGCATAAGGCGGCGCCCATCTCCGTTGCA
GACTTGTGAGGAGCCTGAAATGTACTTACCTACATTAGCGACTTGGAACA
TGGGCCTATCAGGTTTAAATAGGCTGCAATGGGCTTCTGACGACGTGAGG
AAATAACGGCGACACTCTTTGCTCTTTCTCACTACGTGTTTCATAGGTCG
GAGTCATCCTCTACAACTGCGTACCTCGGACCTACTTCAAGCTGGGCCAA
TATACGCGCAACAGCCCCACGATGCGTGGAAAAATTCACTATATAATGTA
CGAGGGAGGCGAGACTCGAACTGGCGTGGCCATCCGCCACATGAGGGATA
CGGTACGAGACTGTTAATAACATGTCAATAAGAACGATATGGCACCGCTC
TCAATGCTGCACTTGCTAGGTTAAACACAGTACCACATGGTAGAGGAGCT
AATGCAGCACTTGCTGGGTTAAACACAGTACCACATGGTACAGAAGCTAT
TGCTGCAATTGCTGGGTTAAACACAGTACCACATGGTACAGAAGCTAATG
CTGCACTTGCTGGGTTAAACACAGTACCACATGGTACAGGAGCTAATGCT
GCACTTGCTGGGTTAAACACAGTACCACATGGTACAGAAGCTAACGTGGT
ACAAAATAGATATCCCTGGAATTCTCCATCTGTGATTTTCTGGTATTTTT
TTCCAGTCCGATTTCCGAGACGGGGTTCCTGGGGCGGCGGTCATCCTGAC
AGACGGACAGGTATGGAGACATGTTTTTACTTGTGCCAGGTGTTCTTTCT
TGTGCCATGTGCTCCTTCTTACCTGTGTCGTGTAAGAACACATAAGCTAG
GTGCCCTTACCTACTCCATGTATTCTAAAATGCTACGCGTTCCTACTTGT
GCCTGGTGTTCTAACCTGTTGCAGTCTCTCAGATAAAGTGCCATTCATTA
CTCATCCCTAGTGTCATGCTTCTCGTTCTCTCAGACAAGTGATGATTACG
CGTACGAGGCCGGAGCGGCGCGGGCGGCAGGGGTTGATCTGTACGCTGTG
GGTGTCGGGTTCCCGGCTTTTGTGGACCAGGCTGCGCTGGAGACGATCAC
AGACTACAGCGACCGCGTGTTCGACACAACCCAACCCTGCGTGGTCGCCC
AGAAAATCGTGGATGATCTGTGCGGTGGGTAGATGTTGCATTTTCAGAAC
TACAGATGGATTTAAAGAGGTGCAATGAGTGGCTGAATGGTTAATGTCTT
TAGCTAACAATCAAGAGGTTTGCAATTCTGGCCATGGGAAAAAAACGTCA
GTGATTGTTTTCAGGAGTCAAAAAGGTTTCAACCAAACCCGACCTGTCGA
CAAAGTTACTGATATAACTCAAACGTTATCCGTCTTATGCTTTATTAAGT
TACTTACCTTATAATCTAAGGTTGGTGTTAGATTCATCAATGTCGTGTGA
AATTTCTCTAGTTTCCCAAGCCCAGAATCCTTCTTCACTACGGACATATT
ATGACATATAATGACTCATAGAGTCGCACAAGATTGGCAGTCAGACTAAG
AACTAGCAGCTGATTTACAGAACGATTTCTTGTATGTCTTCAGGGTAAAG
AATAACAGAGGCATCTGGACCGTCTGACTTGACCTGACCTGACCTGATCT
CGACCACTACTTTCCAACGGACATCCAGTAATCTCCAAGCAGATGTTGGG
GGGACAGATCATACCATTTCCTGACTGCTCAGTTTTTGTTGTTGACATTA
ACGCTGCAGTCGGAAAATGTTGGCACCTTTTCTTCTAACGTCTACTTGGA
GACATTTGAAAATTTCCAGGAAAGATAAACACCCTAAAGGGCTGGTACTA
TATGTGATCTTCGGCGATATCAGAAATTCTATGATGGGAGGGGAGAGGGA
GGTCCCAGCAAAATAACGGATTTTCCATATGTGGCCAATCAGAAAAATTC
TGCTCCATTTGTTGGGTGGACCTTGCATAATTGACAAACAGTTCCACTTG
GACATTAGATATCCCTTGAAATGTCTAACATGAGAAAGCTGAAAACATTT
CGCTTAATTTGTCAAATCAATTCTAATATCAAATACGGTCGTTTCTAATA
AAGAATATGATGACATTACTGCTGAAACCCTACTAATCTGCATACTTTAA
ACCGAAGCATGACATGATTTACTCAGCAAATCGAAGAAAGGCTACATGAA
ATCACTGAAATAAGTCCAAAAATGTCCCTATTTCAAACCAGTTTCAAACA
GGAGCTGGCACCAATGAAAAGTGCCTGTCCAATCAAACTCAT Coding sequence (CDS) from alignment at Sc0000600:46962..49803- >transcript:BL97153_cuf0 ID=transcript:BL97153_cuf0|Name=transcript:BL97153_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=2265bp|location=Sequence derived from alignment at Sc0000600:46962..49803- (Branchiostoma lanceolatum) ATGCTGGATTTCACGGCATGTGCGGCTTTCAAGGGCCATGACATATGGGT CGGAGTCATCCTCTACAACTGCGTACCTCGGACCTACTTCAAGCTGGGCC AATATACGCGCAACAGCCCCACGATGCGTGGAAAAATTCACTATATAATG TACGAGGGAGGCGAGACTCGAACTGGCGTGGCCATCCGCCACATGAGGGA TACGTCCGATTTCCGAGACGGGGTTCCTGGGGCGGCGGTCATCCTGACAG ACGGACAGACAAGTGATGATTACGCGTACGAGGCCGGAGCGGCGCGGGCG GCAGGGGTTGATCTGTACGCTGTGGGTGTCGGGTTCCCGGCTTTTGTGGA CCAGGCTGCGCTGGAGACGATCACAGACTACAGCGACCGCGTGTTCGACA CAACCCAACCCTGCGTGGTCGCCCAGAAAATCGTGGATGATCTGTGCGGG TAAATGCTGGATTTCACGGCATGTGCGGCTTTCAAGGGCCATGACATATG GGTCGGAGTCATCCTCTACAACTGCGTACCTCGGACCTACTTCAAGCTGG GCCAATATACGCGCAACAGCCCCACGATGCGTGGAAAAATTCACTATATA ATGTACGAGGGAGGCGAGACTCGAACTGGCGTGGCCATCCGCCACATGAG GGATACGTCCGATTTCCGAGACGGGGTTCCTGGGGCGGCGGTCATCCTGA CAGACGGACAGACAAGTGATGATTACGCGTACGAGGCCGGAGCGGCGCGG GCGGCAGGGGTTGATCTGTACGCTGTGGGTGTCGGGTTCCCGGCTTTTGT GGACCAGGCTGCGCTGGAGACGATCACAGACTACAGCGACCGCGTGTTCG ACACAACCCAACCCTGCGTGGTCGCCCAGAAAATCGTGGATGATCTGTGC GGGTAAATGCTGGATTTCACGGCATGTGCGGCTTTCAAGGGCCATGACAT ATGGGTCGGAGTCATCCTCTACAACTGCGTACCTCGGACCTACTTCAAGC TGGGCCAATATACGCGCAACAGCCCCACGATGCGTGGAAAAATTCACTAT ATAATGTACGAGGGAGGCGAGACTCGAACTGGCGTGGCCATCCGCCACAT GAGGGATACGTCCGATTTCCGAGACGGGGTTCCTGGGGCGGCGGTCATCC TGACAGACGGACAGACAAGTGATGATTACGCGTACGAGGCCGGAGCGGCG CGGGCGGCAGGGGTTGATCTGTACGCTGTGGGTGTCGGGTTCCCGGCTTT TGTGGACCAGGCTGCGCTGGAGACGATCACAGACTACAGCGACCGCGTGT TCGACACAACCCAACCCTGCGTGGTCGCCCAGAAAATCGTGGATGATCTG TGCGGGTAAATGCTGGATTTCACGGCATGTGCGGCTTTCAAGGGCCATGA CATATGGGTCGGAGTCATCCTCTACAACTGCGTACCTCGGACCTACTTCA AGCTGGGCCAATATACGCGCAACAGCCCCACGATGCGTGGAAAAATTCAC TATATAATGTACGAGGGAGGCGAGACTCGAACTGGCGTGGCCATCCGCCA CATGAGGGATACGTCCGATTTCCGAGACGGGGTTCCTGGGGCGGCGGTCA TCCTGACAGACGGACAGACAAGTGATGATTACGCGTACGAGGCCGGAGCG GCGCGGGCGGCAGGGGTTGATCTGTACGCTGTGGGTGTCGGGTTCCCGGC TTTTGTGGACCAGGCTGCGCTGGAGACGATCACAGACTACAGCGACCGCG TGTTCGACACAACCCAACCCTGCGTGGTCGCCCAGAAAATCGTGGATGAT CTGTGCGGGTAAATGCTGGATTTCACGGCATGTGCGGCTTTCAAGGGCCA TGACATATGGGTCGGAGTCATCCTCTACAACTGCGTACCTCGGACCTACT TCAAGCTGGGCCAATATACGCGCAACAGCCCCACGATGCGTGGAAAAATT CACTATATAATGTACGAGGGAGGCGAGACTCGAACTGGCGTGGCCATCCG CCACATGAGGGATACGTCCGATTTCCGAGACGGGGTTCCTGGGGCGGCGG TCATCCTGACAGACGGACAGACAAGTGATGATTACGCGTACGAGGCCGGA GCGGCGCGGGCGGCAGGGGTTGATCTGTACGCTGTGGGTGTCGGGTTCCC GGCTTTTGTGGACCAGGCTGCGCTGGAGACGATCACAGACTACAGCGACC GCGTGTTCGACACAACCCAACCCTGCGTGGTCGCCCAGAAAATCGTGGAT GATCTGTGCGGGTAA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000600 | genome | Sc0000600:46962..49803 - |
Properties
Property Name | Value |
Transcript id | BL97153_cuf0 |
Biotype | protein_coding |
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