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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97150_cuf1 >transcript:BL97150_cuf1-protein ID=transcript:BL97150_cuf1-protein|Name=transcript:BL97150_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=113bp
HCRANVLPPKCDSCAEDHYGLQTGQGCQPCTCNLTYSYNNSCGDDGQCPC
KPGVGGMACTECMEDYYGLTEEGCTPCGCNRYGSLEGCHGNGTCHCRNAT
EGDKCGICKPGYY Run BLAST on NCBI mRNA from alignment at Sc0000147:64584..66163- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97150_cuf1 ID=transcript:BL97150_cuf1|Name=transcript:BL97150_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=1580bp|location=Sequence derived from alignment at Sc0000147:64584..66163- (Branchiostoma lanceolatum)
GTCATTGCCGTGCCAACGTGCTGCCCCCCAAGTGTGACTCTTGTGCAGAG
GACCACTATGGACTACAGACAGGACAAGGGTGTCAGCCCTGCACCTGTAA
CCTCACCTACTCCTATAACAACTCCTGCGGGGATGACGGACAGTGCCCAT
GCAAACCTGGGGTTGGTGGGATGGCATGTACAGAATGCATGGAAGAGTGA
GTAGTACAGGCCTTGGGCATTATTATCAAATGTTTATTGTTATTTCTTAT
TTTTCTGTGCATCAAGCGATCAGGCCAATTTTATTTTATTGTATGGATGA
CGGAGACCAAAAAAATGATACAAGCTTGCAAATAGAAAAAAAGTTTTGGC
AAAAATGAAAATAAAAAGTTACCTTCATCATGAAATCTATGTGGCCAGGA
AGGATGAACAAAACTTAACACACAGAGTACACTGAAATATAGATTCTTCA
TTTTTGTTCTTTCAAAAGTCCTTTTTTGACTTTTGACTTGTCTTTGAGAT
AGGACATTAGTATCCGTTTTCCGACACATTTTTATTTTATTTACAACATG
TATTTTTTGATTTTGCAACTGCTTTCTACGATTCACATGTACGGCCAAAT
TCTTTGTTGTTGTTGTGGAAACAGACTAAAAATGATCTGCAATTTATTCC
GTACCTCTATTTTTTGTAACTATGTTTAATAGTTGTTGCCATACATTGTA
CCATGTACAATTGTCACGCAACTTTAAGTTCTTCTATGCTCGGGCATAGT
ATTTTTTGTCCATAGCCCAGAAAACATACAATGTCATGTAACATATTGCC
TTTGTCTTCATTGTTTCAGCTACTATGGACTGACTGAGGAGGGGTGCACA
CCCTGTGGATGTAACCGATATGGCAGCCTGGAAGGTTGCCATGGTAACGG
AACGTGCCACTGTAGGAATGCCACAGAGGGGGACAAGTGCGGCATCTGCA
AGCCAGGTCATCTTTTTACTTTCTTGTTTTCAATGTGGCTTAGAAAAGTG
TATTAAAACATACCGATGCTCCACTCTGATTTGGGACATGCACGGTATTG
TCTCTTGGTCCTTTTTTAAAATGGAAAGGCCGCAAAGCTTTTTAAAAAAG
TTTAGCACAAATTTGCAGATTTATAAGTCTTGAAGAAAAAGGCAAAACTT
AGACTTGGAGCAGTTAAATTGCATTTTGTTGATTATTGTTGTTTTTGTCA
ACAAAACTACTTGTTATTTCTCATGTGTAAAGTACTACGGTTTGAGGAGC
TGGTCCGATGACGGACGCCTGTTGTTGTTTATTGTTGTTTTCGTCAACAA
GACTATTTGTTTTCCTATACACAGTACTAACGGCTTGGGGAACTAGTCCA
GTAATGGCTACCTGTTGTTTTTTATTGTTTTCTGTCAACAAAACTATTTG
TTTTCTCATGCCTACGGCTTGGGGAACTGGACCTATGACGGCTGCCTGTT
GTTGTTTATTGTTGTTTTTGTAAACAAAACTATTTGTTTTCCCACAGGGA
ACATTAAAAAGTCCAGTAATGACTGTCTGTTGTTGTTTATTGTTGTTTTT
GTCAACAACCCCATGCACAGGGTACTATGG Coding sequence (CDS) from alignment at Sc0000147:64584..66163- >transcript:BL97150_cuf1 ID=transcript:BL97150_cuf1|Name=transcript:BL97150_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1017bp|location=Sequence derived from alignment at Sc0000147:64584..66163- (Branchiostoma lanceolatum)
CATTGCCGTGCCAACGTGCTGCCCCCCAAGTGTGACTCTTGTGCAGAGGA
CCACTATGGACTACAGACAGGACAAGGGTGTCAGCCCTGCACCTGTAACC
TCACCTACTCCTATAACAACTCCTGCGGGGATGACGGACAGTGCCCATGC
AAACCTGGGGTTGGTGGGATGGCATGTACAGAATGCATGGAAGACTACTA
TGGACTGACTGAGGAGGGGTGCACACCCTGTGGATGTAACCGATATGGCA
GCCTGGAAGGTTGCCATGGTAACGGAACGTGCCACTGTAGGAATGCCACA
GAGGGGGACAAGTGCGGCATCTGCAAGCCAGGGTACTATCATTGCCGTGC
CAACGTGCTGCCCCCCAAGTGTGACTCTTGTGCAGAGGACCACTATGGAC
TACAGACAGGACAAGGGTGTCAGCCCTGCACCTGTAACCTCACCTACTCC
TATAACAACTCCTGCGGGGATGACGGACAGTGCCCATGCAAACCTGGGGT
TGGTGGGATGGCATGTACAGAATGCATGGAAGACTACTATGGACTGACTG
AGGAGGGGTGCACACCCTGTGGATGTAACCGATATGGCAGCCTGGAAGGT
TGCCATGGTAACGGAACGTGCCACTGTAGGAATGCCACAGAGGGGGACAA
GTGCGGCATCTGCAAGCCAGGGTACTATCATTGCCGTGCCAACGTGCTGC
CCCCCAAGTGTGACTCTTGTGCAGAGGACCACTATGGACTACAGACAGGA
CAAGGGTGTCAGCCCTGCACCTGTAACCTCACCTACTCCTATAACAACTC
CTGCGGGGATGACGGACAGTGCCCATGCAAACCTGGGGTTGGTGGGATGG
CATGTACAGAATGCATGGAAGACTACTATGGACTGACTGAGGAGGGGTGC
ACACCCTGTGGATGTAACCGATATGGCAGCCTGGAAGGTTGCCATGGTAA
CGGAACGTGCCACTGTAGGAATGCCACAGAGGGGGACAAGTGCGGCATCT
GCAAGCCAGGGTACTAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000147 | genome | Sc0000147:64584..66163 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97150_cuf1 |
| Biotype | protein_coding |
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