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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97145_cuf3 >transcript:BL97145_cuf3-protein ID=transcript:BL97145_cuf3-protein|Name=transcript:BL97145_cuf3|organism=Branchiostoma lanceolatum|type=polypeptide|length=145bp
LVGRVVIGITFNCFIAYTPDVFPTVVRGMGMGVATAFSRVGTMLSPFVTL
LGDVWPPLPMLTFGVASCAGGLAVCLLPETLRLPLPETIEDVDNPGRKPQ
RKEKDKSVSYTNPWPKRDPFRHVKRVVVCYEIARDGDYFSSILVP Run BLAST on NCBI mRNA from alignment at Sc0000247:116039..117718- Legend: exonCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97145_cuf3 ID=transcript:BL97145_cuf3|Name=transcript:BL97145_cuf3|organism=Branchiostoma lanceolatum|type=mRNA|length=1680bp|location=Sequence derived from alignment at Sc0000247:116039..117718- (Branchiostoma lanceolatum)
TTGGTTGGCAGAGTTGTCATCGGCATCACTTTCAACTGTTTTATTGCATA
CACACCAGACGTGTTCCCGACTGTAGTAAGGTAGGTGGTAAAACATCTCA
ACTGAGAGTGAAGTCACATTTCTCCTGTGAGAACTATGCTAGCACATTAT
AAGTGGGGATGTATATTTTCATTTTGTACAGTTGAACATAATGTGCATAA
TCACTGAAGAAACGTTACAGTAGCTTTCTGCCAAAGGATGGGGCTCTTAC
TATTTCGGTATAAGTCCAGTGAACAAAGATTATGTTAATTATTTCTGTTG
CAATAGGGGCATGGGTATGGGAGTGGCCACAGCGTTTTCCCGGGTCGGAA
CCATGCTGTCTCCCTTCGTGACGCTCCTGGGCGATGTCTGGCCGCCCCTC
CCCATGTTGACGTTCGGAGTGGCGTCTTGTGCCGGCGGTTTGGCTGTCTG
TTTGCTTCCCGAAACGCTTAGACTCCCCCTGCCTGAGACGATAGAGGATG
TGGACAATCCGGGAAGGTATGGATGTATTTTGTTTTGCTTGTTCAACTCC
CTCGTCCAGTCACGTGACCAGGGTGACCTTTGACACCTAGGTCACGTGAC
CACTCTTAGGAGCTGAAGAAAGATGGCGGATGCTCCTGACAGCCCCTCAT
AGCTTTTCAATAATAGTTGTATTAGTTTTATAATCCTTTATTCAATTGTA
TTGATCTGTTTATCAATTAAAAGATGATCTAACATTGCAGCTGAAAACGT
TGATTTCTTTGTCGCACTGAATAATTTTATCAAGTTGTAGCGTTGCATAT
CGCAATTTGTTGCGATGCAAAGGTAGGAAAGTGTGTAGGTTGGTTTGTTA
TTTTACTGCAAATGTAAATGAACTAACATTCTCAACTTCAAAGAACCTAA
CTTAGAGCTTTTTGTTTAGCCATCATCCCAAAAATAGTTATTTTCATTAC
TGCATGATGTAATTTAGTGTGATGCAATCCTAATGTTTTTCCCCTTTTTT
TCTCTTTTTCAGGAAGCCACAAAGAAAAGAAAAGGACAAATCAGTGAGCT
ACACGAACCCCTGGCCCAAACGTGACCCATTCAGACACGTAAAACGTGTA
GTTGTTTGCTATGAAATTGCTCGTGATGGTGACTACTTTAGCTCTATCCT
AGTACCTTGAGGAATGTGTCTATGAAGCTTTAGAACACCTTACTTTATCG
CAACTGCCCGCTATTACGTACACGTGCATGAGAGGGTACAAACTTATTGT
ATTGTGACTTGTATTGCTTGAAAAATTCAGGAGACTAAACTATATCTACT
ATAAAGGGGACTTTGACCCAGGATTAGACAAAAAATAATATTCATATGGC
ATATAGTTTTGGGCGAATTGGTGGAATTTCTTACACTTTGACAGTTTCGT
TTGCATTGTTCTTTATTTACTTTGTAGGGATTATTGCATGTCAGTATGAC
ATTGAATTATATCAGCATATCCATTGAGATCAGTTATGGTATAGAGGACG
ACAGACTAGACATGTATAGATAAATAACTTTAATGAATTATATTATCGCA
ATAAAGGATTTACTCTCATATAATATTCTGTGTTCAACTTTACAGCCTTC
GCTAATCAGTTAGAATATAAAGAGGCATCTTATTATCTTGGTAACGTTAC
ATCTTTTTTCCCGTACGTTTGCTTCACTTT Coding sequence (CDS) from alignment at Sc0000247:116039..117718- >transcript:BL97145_cuf3 ID=transcript:BL97145_cuf3|Name=transcript:BL97145_cuf3|organism=Branchiostoma lanceolatum|type=CDS|length=1314bp|location=Sequence derived from alignment at Sc0000247:116039..117718- (Branchiostoma lanceolatum)
TTGGTTGGCAGAGTTGTCATCGGCATCACTTTCAACTGTTTTATTGCATA
CACACCAGACGTGTTCCCGACTGTAGTAAGGGGCATGGGTATGGGAGTGG
CCACAGCGTTTTCCCGGGTCGGAACCATGCTGTCTCCCTTCGTGACGCTC
CTGGGCGATGTCTGGCCGCCCCTCCCCATGTTGACGTTCGGAGTGGCGTC
TTGTGCCGGCGGTTTGGCTGTCTGTTTGCTTCCCGAAACGCTTAGACTCC
CCCTGCCTGAGACGATAGAGGATGTGGACAATCCGGGAAGGAAGCCACAA
AGAAAAGAAAAGGACAAATCAGTGAGCTACACGAACCCCTGGCCCAAACG
TGACCCATTCAGACACGTAAAACGTGTAGTTGTTTGCTATGAAATTGCTC
GTGATGGTGACTACTTTAGCTCTATCCTAGTACCTTGATTGGTTGGCAGA
GTTGTCATCGGCATCACTTTCAACTGTTTTATTGCATACACACCAGACGT
GTTCCCGACTGTAGTAAGGGGCATGGGTATGGGAGTGGCCACAGCGTTTT
CCCGGGTCGGAACCATGCTGTCTCCCTTCGTGACGCTCCTGGGCGATGTC
TGGCCGCCCCTCCCCATGTTGACGTTCGGAGTGGCGTCTTGTGCCGGCGG
TTTGGCTGTCTGTTTGCTTCCCGAAACGCTTAGACTCCCCCTGCCTGAGA
CGATAGAGGATGTGGACAATCCGGGAAGGAAGCCACAAAGAAAAGAAAAG
GACAAATCAGTGAGCTACACGAACCCCTGGCCCAAACGTGACCCATTCAG
ACACGTAAAACGTGTAGTTGTTTGCTATGAAATTGCTCGTGATGGTGACT
ACTTTAGCTCTATCCTAGTACCTTGATTGGTTGGCAGAGTTGTCATCGGC
ATCACTTTCAACTGTTTTATTGCATACACACCAGACGTGTTCCCGACTGT
AGTAAGGGGCATGGGTATGGGAGTGGCCACAGCGTTTTCCCGGGTCGGAA
CCATGCTGTCTCCCTTCGTGACGCTCCTGGGCGATGTCTGGCCGCCCCTC
CCCATGTTGACGTTCGGAGTGGCGTCTTGTGCCGGCGGTTTGGCTGTCTG
TTTGCTTCCCGAAACGCTTAGACTCCCCCTGCCTGAGACGATAGAGGATG
TGGACAATCCGGGAAGGAAGCCACAAAGAAAAGAAAAGGACAAATCAGTG
AGCTACACGAACCCCTGGCCCAAACGTGACCCATTCAGACACGTAAAACG
TGTAGTTGTTTGCTATGAAATTGCTCGTGATGGTGACTACTTTAGCTCTA
TCCTAGTACCTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000247 | genome | Sc0000247:116039..117718 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97145_cuf3 |
| Biotype | protein_coding |
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