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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97142_cuf0 >transcript:BL97142_cuf0-protein ID=transcript:BL97142_cuf0-protein|Name=transcript:BL97142_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=141bp
SWHVGKHCETLRDACNPNPCRNGGTCEVLQEEGSSPVENDDKHKCHCIAG
YYGLYCERVDHCEPDNPCLHGGTCTTDWRSYVCHCPTGFAGVNCADEDPD
AEEGHFMAILAPLLAAMVVLGGGTTGVCYFLKKKNVITPDR Run BLAST on NCBI mRNA from alignment at Sc0000247:347992..350650- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97142_cuf0 ID=transcript:BL97142_cuf0|Name=transcript:BL97142_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=2659bp|location=Sequence derived from alignment at Sc0000247:347992..350650- (Branchiostoma lanceolatum)
TTCCTGGCACGTGGGGAAGCATTGCGAGACGTTACGAGGTAAAAACAAAG
TTTTGTACTCTTTTGTTTAATAGAAATTGGGCCTGCAAACAATGAAAATC
AAGGAAATCAGTCGTTCCTTTCTTCAGCTATTCCCCTTGGAAGATTTTGA
CAAAAACGCCCCTGCAGTTCCAGAGCAAGCTGCTAGGGGGCCCAAACATA
CACAACTTATTTCTTACATCACAAGCTATCTGCCAACACAAAATCAAGAC
CATAGCATGTCCAGCTCAAAAAAATAATNATGAAAAGATCACTTTGTTCA
CACCTTTATCTGTTCAGTTTTAAATTGGGTGTGTACTTACGTCCATATTC
TTTCTTCTTTTATCACGTTGGTTGTTTTTATATATATATCGGATAACTAG
GCATTCATATAGATGTCTAAAACATAAACTATGTGGTGATCAACAGATGC
CTGTAACCCCAACCCCTGCCGAAATGGAGGAACCTGTGAGGTTTTACAAG
AGGAGGGGTCGTCGCCGGTGGAGAACGATGACAAGCACAAATGTCATTGC
ATCGCAGGGTACTACGGCTTGTACTGTGAACGAGGTAAGTAGCGTTTAAG
TCCCATAGCAGGAAACTTAAACTGTGTTGTTATAATGCATTATGAAGAGC
TGAAAAAATTTACTCACCTGAATTTTCGACTGATTCGCTCAGTTTTCTTC
AGCTTTCTGCCCCAATCGCTCTGGACATTTGAGTTTTAGTTTTTGTGACG
TAATCAATGGGTCAAAGGTTGCTGAAAGTCGGTGTCGCCCCCCGTCTTGG
TTGAGAGAACGTTGGTGAGCCCTAATGCAGACTGCCTCCTTTACCCCTCT
CACAAAGTAGTCATAGTCGGTATCCAGAATATCAACACCCTTCAACGTAA
CTGTCTGACCCGGTGACTCAATATGAACCAGGACGGGGGGCGTTATCTAC
CTCCTGCAACCTTTGACCCAGTGATGACGTCACACATGAATAAAATTCAC
GTACCTTTTTGTAGTTGGAAATTTTTTTGACTATTCATACAGTTAAATCC
TTGTGAAAACTTTGCTCCCGATCTCTTCCCGAACACGGTCGGCACTGGGT
TTGGGAGTCTCCTAGTTACCAACTGAGTTGGTGCTGGCATACACTAAGAC
ATACCTGTACAACTCCAATTCTATATGACTTTGAAACGTTGTTTTCCCCC
GCCCTAGTGGACCACTGTGAGCCGGACAACCCGTGTCTACATGGCGGGAC
TTGCACCACAGACTGGCGGTCGTACGTCTGTCACTGTCCGACGGGATTCG
CTGGCGTCAACTGCGCAGGTGCGTGATGCGATTTCAAATCCATTCCCGCT
TCGTCAAACTTCCTATAACCTTACCTACCTATTCTCTTCGTTCCGGGTAT
GTTCATAGATGTATTGATATCGTATCGTTTTACTGTCAACAGAGTACAGT
ATAACGTTTTAGTTACAGCTTTGCGTAGCAAAACCTTTGTTGGCATGTGT
GGTGGCCGCCATCTTGATTTTGGGAGGGGTGTCTTTTGGGGTCGCTAGCG
TTCTCTCTATTTCTAACAAATCGGCACACAACTGTCACACATTCAACTCA
AATAAAAAGAAAAATTCAATACCAATTCATATTTATAAAAATACCCCGTA
ATCGCTAATCTAACATAGCAAACCTGAAGTATATGTAGCACAAATACTTA
ACTCTAATTTTGTGTGTGTCTGCAGTGTTGATATGTGAATAAAAAATTGA
AGAATTAAATTGAAGATTGTGCCATATTATTATTAGGGCGATACATTTTA
ATCTTACCCATGGCATTTTCATCTTCATTTCAATCGACGTTCCGTTAACC
GGGTGTCACATTCCCCAGGGCATTTATTGTTACTTGACAACATTTATGTA
CTAGTATACAATACACTCCTTACGTTTGGGACCGCATTGTAAACACAACA
TCAACTATCTCTGTATACATGTAAATGCTTTACTTTTGGGATCACATCTG
CAAGCAGCGACACCTATAGCTGCAGTGCAAAATGAACCAGAATTGCTCCA
ATGAAAAGCTTAGCTATGTACAGGGAGTCTTGTTTACTTTTTGTTTCAAC
TTGTTTTGCTTTTCCTCGAAAGATGAGGATCCCGATGCAGAGGAAGGGCA
CTTCATGGCAATCCTGGCGCCCCTTCTAGCAGCAATGGTGGTGTTGGGTG
GAGGGACGACGGGAGTTTGTTACTTCCTGAAGAAGAAAAACGTCATCACT
CCAGACCGCTGAGATAAAGTCTGAGGCTAAAGATGAACGCGAGAATGAAC
AGGCTAGAAAACAGTGGCATTAAATGTCAATTTCATAAAGATTACAGCAA
CTAGAATATTTCCAGTTTTCAAGCCTCATAAAATGCTCTGGGTGCCTTTA
ACAAGCTCACAAAAGACACCACCGAGTAGTCGTGTTTTTTTCTCCATTGA
AAGAGAAAAATAAAAAGACAGAATGACAAGATTAAAATCTTGTTTTAACA
CTTTTCTCTGCAATAAGTGTGAATCAAAACTTGACAGAAAAGTGGCAGAA
TGACAATATTAAAATACTGTTTTGTTAACACTTGTCTTTTCAATAAGTGT
GAATCGAAAATTGTATGAACCGCCGTAATACAAACAAGTATGCTTTAAAT
TTTCATGTG Coding sequence (CDS) from alignment at Sc0000247:347992..350650- >transcript:BL97142_cuf0 ID=transcript:BL97142_cuf0|Name=transcript:BL97142_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1704bp|location=Sequence derived from alignment at Sc0000247:347992..350650- (Branchiostoma lanceolatum)
TCCTGGCACGTGGGGAAGCATTGCGAGACGTTACGAGATGCCTGTAACCC
CAACCCCTGCCGAAATGGAGGAACCTGTGAGGTTTTACAAGAGGAGGGGT
CGTCGCCGGTGGAGAACGATGACAAGCACAAATGTCATTGCATCGCAGGG
TACTACGGCTTGTACTGTGAACGAGTGGACCACTGTGAGCCGGACAACCC
GTGTCTACATGGCGGGACTTGCACCACAGACTGGCGGTCGTACGTCTGTC
ACTGTCCGACGGGATTCGCTGGCGTCAACTGCGCAGATGAGGATCCCGAT
GCAGAGGAAGGGCACTTCATGGCAATCCTGGCGCCCCTTCTAGCAGCAAT
GGTGGTGTTGGGTGGAGGGACGACGGGAGTTTGTTACTTCCTGAAGAAGA
AAAACGTCATCACTCCAGACCGCTGATCCTGGCACGTGGGGAAGCATTGC
GAGACGTTACGAGATGCCTGTAACCCCAACCCCTGCCGAAATGGAGGAAC
CTGTGAGGTTTTACAAGAGGAGGGGTCGTCGCCGGTGGAGAACGATGACA
AGCACAAATGTCATTGCATCGCAGGGTACTACGGCTTGTACTGTGAACGA
GTGGACCACTGTGAGCCGGACAACCCGTGTCTACATGGCGGGACTTGCAC
CACAGACTGGCGGTCGTACGTCTGTCACTGTCCGACGGGATTCGCTGGCG
TCAACTGCGCAGATGAGGATCCCGATGCAGAGGAAGGGCACTTCATGGCA
ATCCTGGCGCCCCTTCTAGCAGCAATGGTGGTGTTGGGTGGAGGGACGAC
GGGAGTTTGTTACTTCCTGAAGAAGAAAAACGTCATCACTCCAGACCGCT
GATCCTGGCACGTGGGGAAGCATTGCGAGACGTTACGAGATGCCTGTAAC
CCCAACCCCTGCCGAAATGGAGGAACCTGTGAGGTTTTACAAGAGGAGGG
GTCGTCGCCGGTGGAGAACGATGACAAGCACAAATGTCATTGCATCGCAG
GGTACTACGGCTTGTACTGTGAACGAGTGGACCACTGTGAGCCGGACAAC
CCGTGTCTACATGGCGGGACTTGCACCACAGACTGGCGGTCGTACGTCTG
TCACTGTCCGACGGGATTCGCTGGCGTCAACTGCGCAGATGAGGATCCCG
ATGCAGAGGAAGGGCACTTCATGGCAATCCTGGCGCCCCTTCTAGCAGCA
ATGGTGGTGTTGGGTGGAGGGACGACGGGAGTTTGTTACTTCCTGAAGAA
GAAAAACGTCATCACTCCAGACCGCTGATCCTGGCACGTGGGGAAGCATT
GCGAGACGTTACGAGATGCCTGTAACCCCAACCCCTGCCGAAATGGAGGA
ACCTGTGAGGTTTTACAAGAGGAGGGGTCGTCGCCGGTGGAGAACGATGA
CAAGCACAAATGTCATTGCATCGCAGGGTACTACGGCTTGTACTGTGAAC
GAGTGGACCACTGTGAGCCGGACAACCCGTGTCTACATGGCGGGACTTGC
ACCACAGACTGGCGGTCGTACGTCTGTCACTGTCCGACGGGATTCGCTGG
CGTCAACTGCGCAGATGAGGATCCCGATGCAGAGGAAGGGCACTTCATGG
CAATCCTGGCGCCCCTTCTAGCAGCAATGGTGGTGTTGGGTGGAGGGACG
ACGGGAGTTTGTTACTTCCTGAAGAAGAAAAACGTCATCACTCCAGACCG
CTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000247 | genome | Sc0000247:347992..350650 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97142_cuf0 |
| Biotype | protein_coding |
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