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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97133_cuf2 >transcript:BL97133_cuf2-protein ID=transcript:BL97133_cuf2-protein|Name=transcript:BL97133_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=217bp
KLLPCRSWCEEVMSMSDDLTKKLLPPCELFPSSQRECWNPEPATNGTEAC
YHGTGINYRGIWSMTTSGAKCLEWSAPEADYYTTEYPWANLDRNYCRNPT
GLHRPFCLTEDGSQEECNILPCNFVGCWDRGPPNYGKTTPRKRFYFFEEK
VTYTCNDGYTLEYGSAREVRCLEGNSGGIWEYDKPVCSINYKQRLEKDLL
GLYSASLAPENITINFT Run BLAST on NCBI mRNA from alignment at Sc0000040:1774869..1776406- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97133_cuf2 ID=transcript:BL97133_cuf2|Name=transcript:BL97133_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=1538bp|location=Sequence derived from alignment at Sc0000040:1774869..1776406- (Branchiostoma lanceolatum)
AAAACTGCTGCCATGCCGTTCTTGGTGTGAGGAAGTGATGAGTATGAGTG
ATGACCTGACGAAGAAACTACTGCCTCCGTGTGAGTTGTTCCCATCATCA
CAGCGGGAATGTTGGAATCCTGAACCAGCCACGAATGGTACTGAAGGTGG
GAATCAGAACTTAGAACAATGTTTTTTGTTGCAAAAGTTTTTCCCTTTTT
GAACGATGATTATATCTATCTACCTGCGTTGATTACTTTTAGCTTGGGCT
TGTACTGTGAGCCGTAGCCATGAGAATCAAATCATCGTATCATCTCATCA
TCAAGATGTGACTTTAATGTCGACTTGCAAAATTCAGGAGGTTTATGATA
AAAACGAACTATTTTATCCGTTTTAAAAACCAAACAATGCAAATTTCTTT
CTTTTTCTCAGCCTGCTACCACGGCACGGGTATAAACTACCGTGGGATAT
GGAGTATGACTACTTCCGGGGCAAAGTGTCTTGAGTGGTCAGCTCCGGAA
GCTGATTACTACACGACTGAGTACCCCTGGGCTAACCTGGACAGGAACTA
CTGCCGTAACCCCACGGGTCTTCATCGGCCATTTTGTTTGACTGAAGACG
GTAGCCAGGAGGAATGCAACATCCTTCCATGCAGTAAGCTGCTTGCTGTC
AACAGAAACAATGTTTCTTGTTTCATTCATTTGCATGCAAACTCGTGTGT
CTATTCCTGTAATCATCAAGGGCAATAATAAAATAAACAATGTGGTTAAA
AATGTGTCCGCACTTGTTCTTTTCTTGATAGTATCATAGAATTGAATGGA
TGTTGATTTTGCCATTTACAAGTAATATCTTGTACTTGTTATTTTTCTAG
ATACTATTGAATGCAATAGAGGCTTGATTTGCCTCTGCATTTACAAATAA
TATCTTGCTACGCTTAGATTTTGTTGGATGTTGGGACAGAGGTCCTCCAA
ACTACGGCAAGACAACGCCAAGAAAGAGGTTCTACTTCTTCGAGGAAAAG
GTCACATACACGTGCAACGATGGCTACACGCTTGAGTACGGCTCCGCCAG
AGAAGTGAGGTGCCTTGAAGGGAACTCAGGAGGCATCTGGGAATATGACA
AGCCCGTTTGTTCAAGTGAATGCTATAAGCATTACCGAACTTATAAACTT
TCGAAATATTTTGCACGCTTAGCAAAGTATTCTTGACATGATTTTTCTGT
TATAGAAAGGTAATAAGATCATGGCGATCTGCCAAAATGTAAACATGACG
CTTTACCTTCAAGTTGGTTTTTACCTCCACGAACATTGTCAATCATTGGA
GGCTTTTTTTGTCTGCGTGTCTCTGTATTTGTGTTAACGGATATTAGTGG
TCATTATAGCGAACCTCTAGGTGGATTGTAATGATATATGGTACTTCGGA
GGAATTAGGCCTAGAACATTTATTTGTCACTTACTTTTCTCCCCCCGCTT
AGTCAACTACAAGCAAAGGCTTGAGAAGGATCTACTGGGACTCTACAGTG
CCAGCCTGGCGCCAGAAAATATCACCATCAACTTCACG Coding sequence (CDS) from alignment at Sc0000040:1774869..1776406- >transcript:BL97133_cuf2 ID=transcript:BL97133_cuf2|Name=transcript:BL97133_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=2604bp|location=Sequence derived from alignment at Sc0000040:1774869..1776406- (Branchiostoma lanceolatum)
AAACTGCTGCCATGCCGTTCTTGGTGTGAGGAAGTGATGAGTATGAGTGA
TGACCTGACGAAGAAACTACTGCCTCCGTGTGAGTTGTTCCCATCATCAC
AGCGGGAATGTTGGAATCCTGAACCAGCCACGAATGGTACTGAAGCCTGC
TACCACGGCACGGGTATAAACTACCGTGGGATATGGAGTATGACTACTTC
CGGGGCAAAGTGTCTTGAGTGGTCAGCTCCGGAAGCTGATTACTACACGA
CTGAGTACCCCTGGGCTAACCTGGACAGGAACTACTGCCGTAACCCCACG
GGTCTTCATCGGCCATTTTGTTTGACTGAAGACGGTAGCCAGGAGGAATG
CAACATCCTTCCATGCAATTTTGTTGGATGTTGGGACAGAGGTCCTCCAA
ACTACGGCAAGACAACGCCAAGAAAGAGGTTCTACTTCTTCGAGGAAAAG
GTCACATACACGTGCAACGATGGCTACACGCTTGAGTACGGCTCCGCCAG
AGAAGTGAGGTGCCTTGAAGGGAACTCAGGAGGCATCTGGGAATATGACA
AGCCCGTTTGTTCAATCAACTACAAGCAAAGGCTTGAGAAGGATCTACTG
GGACTCTACAGTGCCAGCCTGGCGCCAGAAAATATCACCATCAACTTCAC
GAAACTGCTGCCATGCCGTTCTTGGTGTGAGGAAGTGATGAGTATGAGTG
ATGACCTGACGAAGAAACTACTGCCTCCGTGTGAGTTGTTCCCATCATCA
CAGCGGGAATGTTGGAATCCTGAACCAGCCACGAATGGTACTGAAGCCTG
CTACCACGGCACGGGTATAAACTACCGTGGGATATGGAGTATGACTACTT
CCGGGGCAAAGTGTCTTGAGTGGTCAGCTCCGGAAGCTGATTACTACACG
ACTGAGTACCCCTGGGCTAACCTGGACAGGAACTACTGCCGTAACCCCAC
GGGTCTTCATCGGCCATTTTGTTTGACTGAAGACGGTAGCCAGGAGGAAT
GCAACATCCTTCCATGCAATTTTGTTGGATGTTGGGACAGAGGTCCTCCA
AACTACGGCAAGACAACGCCAAGAAAGAGGTTCTACTTCTTCGAGGAAAA
GGTCACATACACGTGCAACGATGGCTACACGCTTGAGTACGGCTCCGCCA
GAGAAGTGAGGTGCCTTGAAGGGAACTCAGGAGGCATCTGGGAATATGAC
AAGCCCGTTTGTTCAATCAACTACAAGCAAAGGCTTGAGAAGGATCTACT
GGGACTCTACAGTGCCAGCCTGGCGCCAGAAAATATCACCATCAACTTCA
CGAAACTGCTGCCATGCCGTTCTTGGTGTGAGGAAGTGATGAGTATGAGT
GATGACCTGACGAAGAAACTACTGCCTCCGTGTGAGTTGTTCCCATCATC
ACAGCGGGAATGTTGGAATCCTGAACCAGCCACGAATGGTACTGAAGCCT
GCTACCACGGCACGGGTATAAACTACCGTGGGATATGGAGTATGACTACT
TCCGGGGCAAAGTGTCTTGAGTGGTCAGCTCCGGAAGCTGATTACTACAC
GACTGAGTACCCCTGGGCTAACCTGGACAGGAACTACTGCCGTAACCCCA
CGGGTCTTCATCGGCCATTTTGTTTGACTGAAGACGGTAGCCAGGAGGAA
TGCAACATCCTTCCATGCAATTTTGTTGGATGTTGGGACAGAGGTCCTCC
AAACTACGGCAAGACAACGCCAAGAAAGAGGTTCTACTTCTTCGAGGAAA
AGGTCACATACACGTGCAACGATGGCTACACGCTTGAGTACGGCTCCGCC
AGAGAAGTGAGGTGCCTTGAAGGGAACTCAGGAGGCATCTGGGAATATGA
CAAGCCCGTTTGTTCAATCAACTACAAGCAAAGGCTTGAGAAGGATCTAC
TGGGACTCTACAGTGCCAGCCTGGCGCCAGAAAATATCACCATCAACTTC
ACGAAACTGCTGCCATGCCGTTCTTGGTGTGAGGAAGTGATGAGTATGAG
TGATGACCTGACGAAGAAACTACTGCCTCCGTGTGAGTTGTTCCCATCAT
CACAGCGGGAATGTTGGAATCCTGAACCAGCCACGAATGGTACTGAAGCC
TGCTACCACGGCACGGGTATAAACTACCGTGGGATATGGAGTATGACTAC
TTCCGGGGCAAAGTGTCTTGAGTGGTCAGCTCCGGAAGCTGATTACTACA
CGACTGAGTACCCCTGGGCTAACCTGGACAGGAACTACTGCCGTAACCCC
ACGGGTCTTCATCGGCCATTTTGTTTGACTGAAGACGGTAGCCAGGAGGA
ATGCAACATCCTTCCATGCAATTTTGTTGGATGTTGGGACAGAGGTCCTC
CAAACTACGGCAAGACAACGCCAAGAAAGAGGTTCTACTTCTTCGAGGAA
AAGGTCACATACACGTGCAACGATGGCTACACGCTTGAGTACGGCTCCGC
CAGAGAAGTGAGGTGCCTTGAAGGGAACTCAGGAGGCATCTGGGAATATG
ACAAGCCCGTTTGTTCAATCAACTACAAGCAAAGGCTTGAGAAGGATCTA
CTGGGACTCTACAGTGCCAGCCTGGCGCCAGAAAATATCACCATCAACTT
CACG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000040 | genome | Sc0000040:1774869..1776406 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97133_cuf2 |
| Biotype | protein_coding |
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