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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97129_cuf2 >transcript:BL97129_cuf2-protein ID=transcript:BL97129_cuf2-protein|Name=transcript:BL97129_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=138bp
WPDNPYLGNVRIILHGDHNTPEMPVPNGPNVGAKAIGVFGGLDLFGKDRN
VCWTHLAQTAAAGADTITLADAVDWQVDEEIVITTTSFDAWQTETFKISD
VSADGRTLTLNSSLAYEHIYHSDTVDGKSYTMAAEVGL Run BLAST on NCBI mRNA from alignment at Sc0000040:1834511..1835945- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97129_cuf2 ID=transcript:BL97129_cuf2|Name=transcript:BL97129_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=1435bp|location=Sequence derived from alignment at Sc0000040:1834511..1835945- (Branchiostoma lanceolatum)
TGGCCAGATAACCCGTATCTTGGCAACGTCCGCATCATTCTCCATGGTGA
CCACAACACCCCGGAGATGCCTGTACCAAACGGTCCGAACGTTGGAGCGA
AGGCAATAGGTGGGGGTCGTCTAAGTACTCATGGGTTCACAATGACTGGC
ACTTTTTGCAGGTCTTTGACAGATTTTTGTCATAAGTTAATGTTAGCCAA
TCAAACAAAATACACACATACAGCTTTATTGACGCAACGAAAAGAACAGT
GGCTTTCGTGCGGTCAACTACAAGCTACAAAATAGAAATCTTAAAAGTCA
ACTAGTTAAGAAATGCAAGCTGATATGAATACGTATATGCAGTCATTAAT
TGTTATTTTGTGTGACCCGTATATTTGTTGTTCAGGTGTGTTTGGAGGCC
TGGACCTGTTCGGTAAGGACAGGAACGTGTGCTGGACTCACCTGGCACAG
ACAGCTGCGGCAGGTGCAGACACCATCACACTAGCAGACGCCGTGGACTG
GCAGGTGGATGAGGAAATAGTCATCACCACGTAAGGAAATCTCACTTGAT
GTCTTTCAAACTAAGGCCTGAAGATACTGATTGCTCTGATGTAACTTATT
GCAACTGTAACCAAACATCAAATACCTCAGAGTCAAAAGCACAATATCAA
GCAGACAAAGCACAACCAAAAACATCAGCGAGAGACCCTCAGAAAATCCA
TTGACTTCCCCGAACACAATGTCTTATTAGAACTTTAATGATGTAATATG
TATCTTTATTATATTTTGTCTGGCCCTTCATGGCATCAATGGAAAGCGAC
CTGCAGGCCGATTTGAGCTTCTAATTAATAAACAAAGTTCAAACAAAATG
TATACTACTAGTAGATCCGTGATCGTCTGTAAACATGCCCCTCACAATGT
CTGGTGGACATTCACTCCGGAGAGGATACAAAGTCTTATGTATAGGATTG
TGACAGTAGAGGTGACTTGCTGGGATTTACGTGCTCTTACTTACCATCTA
ATGCAGAACCAGTTTCGACGCTTGGCAGACGGAGACGTTTAAGATCAGCG
ATGTCTCTGCAGACGGCAGAACGCTCACCCTGAACTCCAGCCTTGCCTAT
GAACATATCTGTGAGTTGAAGTCGTACATGGTCTTTTAAGGTATCACTTT
ATCATCAGGCACAAAGGTTGTGACCTAGGTAGCTTTTATCACTCCAAAGT
CCAAAGTCAATTGGTACAGAAATAAAGAACCACAGCTCAGCTCACAAAGA
TGTCTTTACTGTGCCATTAACTGAATAAAAACAAGCATCGGGACATCCAA
GCACAAGACTCTTGTACATGAATCATACTTTATAATGCATTTTCTAGTAT
AAAAAAAATCCGTTCCTATCACAATAGACCACAGCGACACGGTGGACGGA
AAGTCCTACACCATGGCAGCGGAGGTGGGTCTCCT Coding sequence (CDS) from alignment at Sc0000040:1834511..1835945- >transcript:BL97129_cuf2 ID=transcript:BL97129_cuf2|Name=transcript:BL97129_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1656bp|location=Sequence derived from alignment at Sc0000040:1834511..1835945- (Branchiostoma lanceolatum)
TGGCCAGATAACCCGTATCTTGGCAACGTCCGCATCATTCTCCATGGTGA
CCACAACACCCCGGAGATGCCTGTACCAAACGGTCCGAACGTTGGAGCGA
AGGCAATAGGTGTGTTTGGAGGCCTGGACCTGTTCGGTAAGGACAGGAAC
GTGTGCTGGACTCACCTGGCACAGACAGCTGCGGCAGGTGCAGACACCAT
CACACTAGCAGACGCCGTGGACTGGCAGGTGGATGAGGAAATAGTCATCA
CCACAACCAGTTTCGACGCTTGGCAGACGGAGACGTTTAAGATCAGCGAT
GTCTCTGCAGACGGCAGAACGCTCACCCTGAACTCCAGCCTTGCCTATGA
ACATATCTACCACAGCGACACGGTGGACGGAAAGTCCTACACCATGGCAG
CGGAGGTGGGTCTCTGGCCAGATAACCCGTATCTTGGCAACGTCCGCATC
ATTCTCCATGGTGACCACAACACCCCGGAGATGCCTGTACCAAACGGTCC
GAACGTTGGAGCGAAGGCAATAGGTGTGTTTGGAGGCCTGGACCTGTTCG
GTAAGGACAGGAACGTGTGCTGGACTCACCTGGCACAGACAGCTGCGGCA
GGTGCAGACACCATCACACTAGCAGACGCCGTGGACTGGCAGGTGGATGA
GGAAATAGTCATCACCACAACCAGTTTCGACGCTTGGCAGACGGAGACGT
TTAAGATCAGCGATGTCTCTGCAGACGGCAGAACGCTCACCCTGAACTCC
AGCCTTGCCTATGAACATATCTACCACAGCGACACGGTGGACGGAAAGTC
CTACACCATGGCAGCGGAGGTGGGTCTCTGGCCAGATAACCCGTATCTTG
GCAACGTCCGCATCATTCTCCATGGTGACCACAACACCCCGGAGATGCCT
GTACCAAACGGTCCGAACGTTGGAGCGAAGGCAATAGGTGTGTTTGGAGG
CCTGGACCTGTTCGGTAAGGACAGGAACGTGTGCTGGACTCACCTGGCAC
AGACAGCTGCGGCAGGTGCAGACACCATCACACTAGCAGACGCCGTGGAC
TGGCAGGTGGATGAGGAAATAGTCATCACCACAACCAGTTTCGACGCTTG
GCAGACGGAGACGTTTAAGATCAGCGATGTCTCTGCAGACGGCAGAACGC
TCACCCTGAACTCCAGCCTTGCCTATGAACATATCTACCACAGCGACACG
GTGGACGGAAAGTCCTACACCATGGCAGCGGAGGTGGGTCTCTGGCCAGA
TAACCCGTATCTTGGCAACGTCCGCATCATTCTCCATGGTGACCACAACA
CCCCGGAGATGCCTGTACCAAACGGTCCGAACGTTGGAGCGAAGGCAATA
GGTGTGTTTGGAGGCCTGGACCTGTTCGGTAAGGACAGGAACGTGTGCTG
GACTCACCTGGCACAGACAGCTGCGGCAGGTGCAGACACCATCACACTAG
CAGACGCCGTGGACTGGCAGGTGGATGAGGAAATAGTCATCACCACAACC
AGTTTCGACGCTTGGCAGACGGAGACGTTTAAGATCAGCGATGTCTCTGC
AGACGGCAGAACGCTCACCCTGAACTCCAGCCTTGCCTATGAACATATCT
ACCACAGCGACACGGTGGACGGAAAGTCCTACACCATGGCAGCGGAGGTG
GGTCTC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000040 | genome | Sc0000040:1834511..1835945 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97129_cuf2 |
| Biotype | protein_coding |
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