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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97125_cuf1 >transcript:BL97125_cuf1-protein ID=transcript:BL97125_cuf1-protein|Name=transcript:BL97125_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=267bp
VSYKRRLQKDLLAVEVYSASLAPENVTINFTGNVEQIVDLDEKKEQLVAS
VIIDFSWYDIRLKWNPKYNGGIKEFSVPGKDIWTPAFTLKRNANPLHQGL
PNAVPVRVSSSGLVEWRVETLTTTVCDAHPFYFPADTMDCDVCFSATSAI
EQTIQCHRRSSTSDVHVDSHPCGSYSPATDEGEWYRSDKVFAKDKREACF
SLKLSRIPTFHIATTVGPCIILIVLMTITFIMPIDKGDRISFGVTIQLSM
VVSLVFVTEVLPVKGAL Run BLAST on NCBI mRNA from alignment at Sc0000297:279993..281883- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97125_cuf1 ID=transcript:BL97125_cuf1|Name=transcript:BL97125_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=1891bp|location=Sequence derived from alignment at Sc0000297:279993..281883- (Branchiostoma lanceolatum)
GTAAGCTACAAACGAAGGCTGCAAAAGGATCTACTAGCGGTAGAAGTCTA
CAGTGCAAGTCTGGCACCTGAAAATGTAACCATCAACTTCACGGGAAATG
TGGAACAAATCGTCGATTTGGTGAGTACTGTGTCCGAGAAATTTGAGGAT
CTTTGTTTCTAAGATAGTAAAGTTACAACGTATGGAGGCCAAAATTAATT
CACAGCGCAACTTATGCTCACGTTATGATCTTTATTTCAGGATGAAAAGA
AGGAACAGCTTGTCGCTTCTGTGATCATCGATTTTGTAAGTTTCCACAGA
CATAGGAGCTCTGTAGCATGTATTACATATATCTCTCGCTGCAAGGTGCT
GATTTTGCAACAGCTAGTAACCGTTTTAATATCTGTAAGCCATGCGACTA
ATTTGAGAAAAATACCATCTTGATTCTGTGAAAAACACTGTGGAAACCAG
TCCAATTGGAGCTCAGAATTCTCTGTTACTGTGAAAACCAGTCCTCAAAT
GCTTCAACATTGTATTAGTTCTCAGTCCTACAATAACTGGTCTATGTTTC
CACATGGGCATGAATCAGCAGGATTAAAATGTTTCAAGATTAGAGAAGGT
AATTGGCTATNAAATGTTTCAAGATTAGAGGAGGTAATTGGCTATCAAGC
TTCTAGTTATATAGGAGCCAGACCAATGGAAGGGCTACTAGACGCGTGAT
TTTGCCAGGCTAGTAACTCTATGTAAGGAAAGTATTCCAGTCACATTCAT
TTAGGTCGCAGTGTTGAACAAGTTTTGCTTGTCACGCCCTTTTTATTTCC
TAGTCTTGGTACGACATTCGGCTGAAATGGAACCCAAAGTATAACGGTGG
CATCAAGGAGTTCAGCGTTCCTGGCAAGGATATTTGGACTCCAGCATTTA
CTCTAAAGAGGAAGTAGGTGGAAACATTTATCAACTAACCTGAGCAAGAG
AAATGAGAGCATTCGTCAAATTTGCTTCATAAGAACTTCTTTACTAGACA
AATTGAAATAGTAGGATTCTACGCTTGTCACTAAACACGAAGTGTTACAC
AGTACAGTACGAAGGGAAATTGTTGGCAAGGATTCAACATCATTCACTTG
TATAAAACGTATCAAGTTACAAGAATGTCTTGGTCACCTTCCAGTGCTAA
TCCCCTCCACCAAGGCCTGCCAAATGCCGTACCGGTCCGAGTCAGCAGCA
GCGGCCTGGTAGAGTGGAGAGTGGAAACTCTGACCACCACCGTGTGTGAT
GCACACCCCTTCTACTTTCCTGCTGACACCATGGATTGTGACGTGTGTTT
TTCAGCGACCTCAGCAATCGAGCAAACCATACGTAAGGTTTTTAAAGTTA
TTTTGCTTTTACTACCGTAGTAACAGCAATCTAATTGCCTGAGGATAAAT
GGAAGTATTCCCAGTATGAAAAAAAATATTTCATTGTCAATTCAAGAGTG
AGGAGACATTTTAACGTCGCCAATGCCTCGTACGTGGTAGCAATACGTTT
ACGTCTAGAGACTGCGATAAACTGTTGGAATGACCAATTGATGTTAAATA
CAGAATGCCATAGGAGAAGTTCTACATCAGACGTACATGTGGACAGCCAT
CCTTGTGGCTCTTACTCCCCTGCAACAGATGAGGGAGAATGGTATCGGAG
TGATAAGGTCTTCGCAAAGGACAAGAGGGAAGCGTGTTTTTCTCTAAAAC
TGTCGAGGATCCCCACGTTCCACATCGCCACTACTGTTGGACCCTGCATC
ATCCTGATTGTTCTGATGACCATCACCTTCATCATGCCCATAGACAAGGG
AGACCGGATCTCCTTCGGAGTGACCATTCAACTCTCTATGGTCGTTTCTC
TCGTGTTTGTTACAGAGGTTCTTCCTGTCAAGGGGGCTCTG Coding sequence (CDS) from alignment at Sc0000297:279993..281883- >transcript:BL97125_cuf1 ID=transcript:BL97125_cuf1|Name=transcript:BL97125_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=4005bp|location=Sequence derived from alignment at Sc0000297:279993..281883- (Branchiostoma lanceolatum)
GTAAGCTACAAACGAAGGCTGCAAAAGGATCTACTAGCGGTAGAAGTCTA
CAGTGCAAGTCTGGCACCTGAAAATGTAACCATCAACTTCACGGGAAATG
TGGAACAAATCGTCGATTTGGATGAAAAGAAGGAACAGCTTGTCGCTTCT
GTGATCATCGATTTTTCTTGGTACGACATTCGGCTGAAATGGAACCCAAA
GTATAACGGTGGCATCAAGGAGTTCAGCGTTCCTGGCAAGGATATTTGGA
CTCCAGCATTTACTCTAAAGAGGAATGCTAATCCCCTCCACCAAGGCCTG
CCAAATGCCGTACCGGTCCGAGTCAGCAGCAGCGGCCTGGTAGAGTGGAG
AGTGGAAACTCTGACCACCACCGTGTGTGATGCACACCCCTTCTACTTTC
CTGCTGACACCATGGATTGTGACGTGTGTTTTTCAGCGACCTCAGCAATC
GAGCAAACCATACAATGCCATAGGAGAAGTTCTACATCAGACGTACATGT
GGACAGCCATCCTTGTGGCTCTTACTCCCCTGCAACAGATGAGGGAGAAT
GGTATCGGAGTGATAAGGTCTTCGCAAAGGACAAGAGGGAAGCGTGTTTT
TCTCTAAAACTGTCGAGGATCCCCACGTTCCACATCGCCACTACTGTTGG
ACCCTGCATCATCCTGATTGTTCTGATGACCATCACCTTCATCATGCCCA
TAGACAAGGGAGACCGGATCTCCTTCGGAGTGACCATTCAACTCTCTATG
GTCGTTTCTCTCGTGTTTGTTACAGAGGTTCTTCCTGTCAAGGGGGCTCT
GGTAAGCTACAAACGAAGGCTGCAAAAGGATCTACTAGCGGTAGAAGTCT
ACAGTGCAAGTCTGGCACCTGAAAATGTAACCATCAACTTCACGGGAAAT
GTGGAACAAATCGTCGATTTGGATGAAAAGAAGGAACAGCTTGTCGCTTC
TGTGATCATCGATTTTTCTTGGTACGACATTCGGCTGAAATGGAACCCAA
AGTATAACGGTGGCATCAAGGAGTTCAGCGTTCCTGGCAAGGATATTTGG
ACTCCAGCATTTACTCTAAAGAGGAATGCTAATCCCCTCCACCAAGGCCT
GCCAAATGCCGTACCGGTCCGAGTCAGCAGCAGCGGCCTGGTAGAGTGGA
GAGTGGAAACTCTGACCACCACCGTGTGTGATGCACACCCCTTCTACTTT
CCTGCTGACACCATGGATTGTGACGTGTGTTTTTCAGCGACCTCAGCAAT
CGAGCAAACCATACAATGCCATAGGAGAAGTTCTACATCAGACGTACATG
TGGACAGCCATCCTTGTGGCTCTTACTCCCCTGCAACAGATGAGGGAGAA
TGGTATCGGAGTGATAAGGTCTTCGCAAAGGACAAGAGGGAAGCGTGTTT
TTCTCTAAAACTGTCGAGGATCCCCACGTTCCACATCGCCACTACTGTTG
GACCCTGCATCATCCTGATTGTTCTGATGACCATCACCTTCATCATGCCC
ATAGACAAGGGAGACCGGATCTCCTTCGGAGTGACCATTCAACTCTCTAT
GGTCGTTTCTCTCGTGTTTGTTACAGAGGTTCTTCCTGTCAAGGGGGCTC
TGGTAAGCTACAAACGAAGGCTGCAAAAGGATCTACTAGCGGTAGAAGTC
TACAGTGCAAGTCTGGCACCTGAAAATGTAACCATCAACTTCACGGGAAA
TGTGGAACAAATCGTCGATTTGGATGAAAAGAAGGAACAGCTTGTCGCTT
CTGTGATCATCGATTTTTCTTGGTACGACATTCGGCTGAAATGGAACCCA
AAGTATAACGGTGGCATCAAGGAGTTCAGCGTTCCTGGCAAGGATATTTG
GACTCCAGCATTTACTCTAAAGAGGAATGCTAATCCCCTCCACCAAGGCC
TGCCAAATGCCGTACCGGTCCGAGTCAGCAGCAGCGGCCTGGTAGAGTGG
AGAGTGGAAACTCTGACCACCACCGTGTGTGATGCACACCCCTTCTACTT
TCCTGCTGACACCATGGATTGTGACGTGTGTTTTTCAGCGACCTCAGCAA
TCGAGCAAACCATACAATGCCATAGGAGAAGTTCTACATCAGACGTACAT
GTGGACAGCCATCCTTGTGGCTCTTACTCCCCTGCAACAGATGAGGGAGA
ATGGTATCGGAGTGATAAGGTCTTCGCAAAGGACAAGAGGGAAGCGTGTT
TTTCTCTAAAACTGTCGAGGATCCCCACGTTCCACATCGCCACTACTGTT
GGACCCTGCATCATCCTGATTGTTCTGATGACCATCACCTTCATCATGCC
CATAGACAAGGGAGACCGGATCTCCTTCGGAGTGACCATTCAACTCTCTA
TGGTCGTTTCTCTCGTGTTTGTTACAGAGGTTCTTCCTGTCAAGGGGGCT
CTGGTAAGCTACAAACGAAGGCTGCAAAAGGATCTACTAGCGGTAGAAGT
CTACAGTGCAAGTCTGGCACCTGAAAATGTAACCATCAACTTCACGGGAA
ATGTGGAACAAATCGTCGATTTGGATGAAAAGAAGGAACAGCTTGTCGCT
TCTGTGATCATCGATTTTTCTTGGTACGACATTCGGCTGAAATGGAACCC
AAAGTATAACGGTGGCATCAAGGAGTTCAGCGTTCCTGGCAAGGATATTT
GGACTCCAGCATTTACTCTAAAGAGGAATGCTAATCCCCTCCACCAAGGC
CTGCCAAATGCCGTACCGGTCCGAGTCAGCAGCAGCGGCCTGGTAGAGTG
GAGAGTGGAAACTCTGACCACCACCGTGTGTGATGCACACCCCTTCTACT
TTCCTGCTGACACCATGGATTGTGACGTGTGTTTTTCAGCGACCTCAGCA
ATCGAGCAAACCATACAATGCCATAGGAGAAGTTCTACATCAGACGTACA
TGTGGACAGCCATCCTTGTGGCTCTTACTCCCCTGCAACAGATGAGGGAG
AATGGTATCGGAGTGATAAGGTCTTCGCAAAGGACAAGAGGGAAGCGTGT
TTTTCTCTAAAACTGTCGAGGATCCCCACGTTCCACATCGCCACTACTGT
TGGACCCTGCATCATCCTGATTGTTCTGATGACCATCACCTTCATCATGC
CCATAGACAAGGGAGACCGGATCTCCTTCGGAGTGACCATTCAACTCTCT
ATGGTCGTTTCTCTCGTGTTTGTTACAGAGGTTCTTCCTGTCAAGGGGGC
TCTGGTAAGCTACAAACGAAGGCTGCAAAAGGATCTACTAGCGGTAGAAG
TCTACAGTGCAAGTCTGGCACCTGAAAATGTAACCATCAACTTCACGGGA
AATGTGGAACAAATCGTCGATTTGGATGAAAAGAAGGAACAGCTTGTCGC
TTCTGTGATCATCGATTTTTCTTGGTACGACATTCGGCTGAAATGGAACC
CAAAGTATAACGGTGGCATCAAGGAGTTCAGCGTTCCTGGCAAGGATATT
TGGACTCCAGCATTTACTCTAAAGAGGAATGCTAATCCCCTCCACCAAGG
CCTGCCAAATGCCGTACCGGTCCGAGTCAGCAGCAGCGGCCTGGTAGAGT
GGAGAGTGGAAACTCTGACCACCACCGTGTGTGATGCACACCCCTTCTAC
TTTCCTGCTGACACCATGGATTGTGACGTGTGTTTTTCAGCGACCTCAGC
AATCGAGCAAACCATACAATGCCATAGGAGAAGTTCTACATCAGACGTAC
ATGTGGACAGCCATCCTTGTGGCTCTTACTCCCCTGCAACAGATGAGGGA
GAATGGTATCGGAGTGATAAGGTCTTCGCAAAGGACAAGAGGGAAGCGTG
TTTTTCTCTAAAACTGTCGAGGATCCCCACGTTCCACATCGCCACTACTG
TTGGACCCTGCATCATCCTGATTGTTCTGATGACCATCACCTTCATCATG
CCCATAGACAAGGGAGACCGGATCTCCTTCGGAGTGACCATTCAACTCTC
TATGGTCGTTTCTCTCGTGTTTGTTACAGAGGTTCTTCCTGTCAAGGGGG
CTCTG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000297 | genome | Sc0000297:279993..281883 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97125_cuf1 |
| Biotype | protein_coding |
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