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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97113_cuf8 >transcript:BL97113_cuf8-protein ID=transcript:BL97113_cuf8-protein|Name=transcript:BL97113_cuf8|organism=Branchiostoma lanceolatum|type=polypeptide|length=348bp
TDSAFTRSERLGCCLSLLLMSMVSSAMWLREEIGTQVVQAVSLGPFSFTL
NGVYTGVMTSITCLPVIMAIVLLFQYSRPSNKGNRRVRDVETGGPAEAPA
QQGPAKGLPHWCKYVAWVLVVLSAVGSAVFTALYSLTWGKDKSERWLSAY
FTTFLVDMFLMQPAKLLLLTILTSSIRKPQAVQKIFEEKRGPVSIDARTV
SSQKARFSSDAFRMRRKMERLSMTSLANIKQARMRQRRDRRVVNTFWDIM
WFCCCLLIVISIANEHHNTTEGFYQTQSMTNTFVQSMDEVNDPLTFWSWL
YETALGNFYPETSYKGDKPRWQDKSFTADMQSVLVYPPSLIQGRVQTG Run BLAST on NCBI mRNA from alignment at Sc0000052:1512417..1514458+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97113_cuf8 ID=transcript:BL97113_cuf8|Name=transcript:BL97113_cuf8|organism=Branchiostoma lanceolatum|type=mRNA|length=2042bp|location=Sequence derived from alignment at Sc0000052:1512417..1514458+ (Branchiostoma lanceolatum)
TACAGATAGCGCGTTCACCCGCAGCGAGAGGCTCGGCTGCTGCCTGAGTC
TCCTTCTCATGTCCATGGTGTCCAGCGCCATGTGGCTGAGGGAAGAAATA
GGAACCCAGGTTGTGCAGGCCGTCAGCCTGGGGCCGTTCTCCTTCACCCT
GAATGGAGTCTACACTGGGGTCATGACTAGCATTACCTGCCTTCCCGTCA
TCATGGCCATCGTCCTGCTGTTCCAGTACAGCCGGCCCAGCAACAAGGGC
AACCGGAGGGTCCGAGATGTGGAGACGGGCGGCCCAGCTGAGGCACCCGC
CCAGCAAGGACCAGCCAAGGGCCTGCCGCACTGGTGCAAGTACGTGGCCT
GGGTGCTGGTGGTGCTGTCTGCTGTGGGGTCAGCTGTCTTCACCGCGCTG
TACAGTCTGACTTGGGGCAAGGACAAGTCCGAGAGGTGGCTGTCAGCGTA
CTTCACCACCTTTCTGGTGGACATGTTCCTCATGCAACCAGCAAAGGTAA
GGACATGCTCTCTGTTGAATTGCCTGGGTATAGTATATTATTGTAACGTA
ATATCATTACATGTTTGTTACAGTTGCAGTTGCTACATGTACCTGTTACT
AACATCCATGCACAATATTGTTTGATGATACCTGACTTCCTCAGAACATG
CTGTATACAAACCACATCCTAAGGATCATAATATCATATGCATCTTCAGC
TACTGTTCTATTTGTTCTCAGTACTATCATAATAAACAATGTCTTCAGAA
ATCCTAAGAAGCAATGCTTTTGTCTTTCAGTTATTGCTCCTCACAATCTT
GACTTCATCCATTCGCAAGCCGCAAGCCGTCCAGAAGATTTTTGAAGAGA
AGCGGGGCCCCGTTTCCATTGATGCCAGGACAGTGTCTTCACAAAAGGCA
CGCTTCAGCTGTAAGTTTTAGCACACATGTTTGTAGAAAACAGCATTATA
TATCATTACCATGAAGATTTAGACTATGCACATGTTACTACAAGATTAGA
AACTGTTTGTTAGATGGTGAAAGAAAACCTGTGTGAGTGTGCTCCTAGTT
CCACACCCTGTTTTGTGAATTGAGTTGACATTTCCTCTTGCATGATAGTT
TGTATATTATCCAGGTGGTGGGTTTTCCACTTTTCTAACAAATACAGAGC
GTATATGTGACTCTATTGATATTTTTTGATATGCTTACTACAGCCGATGC
ATTTCGCATGAGGAGGAAGATGGAACGACTTTCGATGACATCCCTTGCCA
ACATCAAACAAGCGAGAATGAGGCAGCGCAGGGACAGGAGAGTTGTGAAC
ACCTTTTGGGACATCATGTGGTTCTGCTGTTGCCTCCTGATTGTCATCAG
CATTGCTAACGAGCACCACAACACCACAGAGGGTTTCTATCAGACACAGA
GCATGACCAACACCTTTGTGCAGTCGATGGACGAGGTAAGTTCATTATAC
TACATGTAGATCCTTGCTTTGGTCTCTTACTATAGATCCTTGCATATACT
TAATAGGTACAGTATCGGATCACTAAATCATTGCATTTGTGNAGAGCATG
ATCAACACCTTTGTGCAGTCTATGGACGAGGTAAGTTCATTATACTACAT
GTAGATCCTTGCTTTGGTCTCTTACTATAGATCCTTGCATATACTTAATA
GGTACAGTATCGGATCACTAAATCATTGCATTTGTGAGACAAACATTTTA
AACCAGTGGAAGGGCCTTTATGTTGACACTTAGCTTCTCACATCGGGTAA
TTAGAACATAGGTTCAGTGTGCACCATTTGAATTTATAAATCATTATGAG
AAATCTCCTGATAATTGTTATTTTTTTCAGTACAACTATATCACAAGGCT
TTATTTCTCCACAGGTAAATGATCCTCTAACCTTCTGGTCCTGGCTGTAC
GAGACTGCTCTTGGGAACTTCTACCCGGAGACTTCCTACAAAGGTGACAA
GCCCCGCTGGCAGGACAAGAGCTTCACAGCTGACATGCAGTCGGTCCTGG
TCTACCCACCTAGCCTGATCCAAGGTCGAGTACAGACAGGTA Coding sequence (CDS) from alignment at Sc0000052:1512417..1514458+ >transcript:BL97113_cuf8 ID=transcript:BL97113_cuf8|Name=transcript:BL97113_cuf8|organism=Branchiostoma lanceolatum|type=CDS|length=4176bp|location=Sequence derived from alignment at Sc0000052:1512417..1514458+ (Branchiostoma lanceolatum)
ACAGATAGCGCGTTCACCCGCAGCGAGAGGCTCGGCTGCTGCCTGAGTCT
CCTTCTCATGTCCATGGTGTCCAGCGCCATGTGGCTGAGGGAAGAAATAG
GAACCCAGGTTGTGCAGGCCGTCAGCCTGGGGCCGTTCTCCTTCACCCTG
AATGGAGTCTACACTGGGGTCATGACTAGCATTACCTGCCTTCCCGTCAT
CATGGCCATCGTCCTGCTGTTCCAGTACAGCCGGCCCAGCAACAAGGGCA
ACCGGAGGGTCCGAGATGTGGAGACGGGCGGCCCAGCTGAGGCACCCGCC
CAGCAAGGACCAGCCAAGGGCCTGCCGCACTGGTGCAAGTACGTGGCCTG
GGTGCTGGTGGTGCTGTCTGCTGTGGGGTCAGCTGTCTTCACCGCGCTGT
ACAGTCTGACTTGGGGCAAGGACAAGTCCGAGAGGTGGCTGTCAGCGTAC
TTCACCACCTTTCTGGTGGACATGTTCCTCATGCAACCAGCAAAGTTATT
GCTCCTCACAATCTTGACTTCATCCATTCGCAAGCCGCAAGCCGTCCAGA
AGATTTTTGAAGAGAAGCGGGGCCCCGTTTCCATTGATGCCAGGACAGTG
TCTTCACAAAAGGCACGCTTCAGCTCCGATGCATTTCGCATGAGGAGGAA
GATGGAACGACTTTCGATGACATCCCTTGCCAACATCAAACAAGCGAGAA
TGAGGCAGCGCAGGGACAGGAGAGTTGTGAACACCTTTTGGGACATCATG
TGGTTCTGCTGTTGCCTCCTGATTGTCATCAGCATTGCTAACGAGCACCA
CAACACCACAGAGGGTTTCTATCAGACACAGAGCATGACCAACACCTTTG
TGCAGTCGATGGACGAGGTAAATGATCCTCTAACCTTCTGGTCCTGGCTG
TACGAGACTGCTCTTGGGAACTTCTACCCGGAGACTTCCTACAAAGGTGA
CAAGCCCCGCTGGCAGGACAAGAGCTTCACAGCTGACATGCAGTCGGTCC
TGGTCTACCCACCTAGCCTGATCCAAGGTCGAGTACAGACAGGTACAGAT
AGCGCGTTCACCCGCAGCGAGAGGCTCGGCTGCTGCCTGAGTCTCCTTCT
CATGTCCATGGTGTCCAGCGCCATGTGGCTGAGGGAAGAAATAGGAACCC
AGGTTGTGCAGGCCGTCAGCCTGGGGCCGTTCTCCTTCACCCTGAATGGA
GTCTACACTGGGGTCATGACTAGCATTACCTGCCTTCCCGTCATCATGGC
CATCGTCCTGCTGTTCCAGTACAGCCGGCCCAGCAACAAGGGCAACCGGA
GGGTCCGAGATGTGGAGACGGGCGGCCCAGCTGAGGCACCCGCCCAGCAA
GGACCAGCCAAGGGCCTGCCGCACTGGTGCAAGTACGTGGCCTGGGTGCT
GGTGGTGCTGTCTGCTGTGGGGTCAGCTGTCTTCACCGCGCTGTACAGTC
TGACTTGGGGCAAGGACAAGTCCGAGAGGTGGCTGTCAGCGTACTTCACC
ACCTTTCTGGTGGACATGTTCCTCATGCAACCAGCAAAGTTATTGCTCCT
CACAATCTTGACTTCATCCATTCGCAAGCCGCAAGCCGTCCAGAAGATTT
TTGAAGAGAAGCGGGGCCCCGTTTCCATTGATGCCAGGACAGTGTCTTCA
CAAAAGGCACGCTTCAGCTCCGATGCATTTCGCATGAGGAGGAAGATGGA
ACGACTTTCGATGACATCCCTTGCCAACATCAAACAAGCGAGAATGAGGC
AGCGCAGGGACAGGAGAGTTGTGAACACCTTTTGGGACATCATGTGGTTC
TGCTGTTGCCTCCTGATTGTCATCAGCATTGCTAACGAGCACCACAACAC
CACAGAGGGTTTCTATCAGACACAGAGCATGACCAACACCTTTGTGCAGT
CGATGGACGAGGTAAATGATCCTCTAACCTTCTGGTCCTGGCTGTACGAG
ACTGCTCTTGGGAACTTCTACCCGGAGACTTCCTACAAAGGTGACAAGCC
CCGCTGGCAGGACAAGAGCTTCACAGCTGACATGCAGTCGGTCCTGGTCT
ACCCACCTAGCCTGATCCAAGGTCGAGTACAGACAGGTACAGATAGCGCG
TTCACCCGCAGCGAGAGGCTCGGCTGCTGCCTGAGTCTCCTTCTCATGTC
CATGGTGTCCAGCGCCATGTGGCTGAGGGAAGAAATAGGAACCCAGGTTG
TGCAGGCCGTCAGCCTGGGGCCGTTCTCCTTCACCCTGAATGGAGTCTAC
ACTGGGGTCATGACTAGCATTACCTGCCTTCCCGTCATCATGGCCATCGT
CCTGCTGTTCCAGTACAGCCGGCCCAGCAACAAGGGCAACCGGAGGGTCC
GAGATGTGGAGACGGGCGGCCCAGCTGAGGCACCCGCCCAGCAAGGACCA
GCCAAGGGCCTGCCGCACTGGTGCAAGTACGTGGCCTGGGTGCTGGTGGT
GCTGTCTGCTGTGGGGTCAGCTGTCTTCACCGCGCTGTACAGTCTGACTT
GGGGCAAGGACAAGTCCGAGAGGTGGCTGTCAGCGTACTTCACCACCTTT
CTGGTGGACATGTTCCTCATGCAACCAGCAAAGTTATTGCTCCTCACAAT
CTTGACTTCATCCATTCGCAAGCCGCAAGCCGTCCAGAAGATTTTTGAAG
AGAAGCGGGGCCCCGTTTCCATTGATGCCAGGACAGTGTCTTCACAAAAG
GCACGCTTCAGCTCCGATGCATTTCGCATGAGGAGGAAGATGGAACGACT
TTCGATGACATCCCTTGCCAACATCAAACAAGCGAGAATGAGGCAGCGCA
GGGACAGGAGAGTTGTGAACACCTTTTGGGACATCATGTGGTTCTGCTGT
TGCCTCCTGATTGTCATCAGCATTGCTAACGAGCACCACAACACCACAGA
GGGTTTCTATCAGACACAGAGCATGACCAACACCTTTGTGCAGTCGATGG
ACGAGGTAAATGATCCTCTAACCTTCTGGTCCTGGCTGTACGAGACTGCT
CTTGGGAACTTCTACCCGGAGACTTCCTACAAAGGTGACAAGCCCCGCTG
GCAGGACAAGAGCTTCACAGCTGACATGCAGTCGGTCCTGGTCTACCCAC
CTAGCCTGATCCAAGGTCGAGTACAGACAGGTACAGATAGCGCGTTCACC
CGCAGCGAGAGGCTCGGCTGCTGCCTGAGTCTCCTTCTCATGTCCATGGT
GTCCAGCGCCATGTGGCTGAGGGAAGAAATAGGAACCCAGGTTGTGCAGG
CCGTCAGCCTGGGGCCGTTCTCCTTCACCCTGAATGGAGTCTACACTGGG
GTCATGACTAGCATTACCTGCCTTCCCGTCATCATGGCCATCGTCCTGCT
GTTCCAGTACAGCCGGCCCAGCAACAAGGGCAACCGGAGGGTCCGAGATG
TGGAGACGGGCGGCCCAGCTGAGGCACCCGCCCAGCAAGGACCAGCCAAG
GGCCTGCCGCACTGGTGCAAGTACGTGGCCTGGGTGCTGGTGGTGCTGTC
TGCTGTGGGGTCAGCTGTCTTCACCGCGCTGTACAGTCTGACTTGGGGCA
AGGACAAGTCCGAGAGGTGGCTGTCAGCGTACTTCACCACCTTTCTGGTG
GACATGTTCCTCATGCAACCAGCAAAGTTATTGCTCCTCACAATCTTGAC
TTCATCCATTCGCAAGCCGCAAGCCGTCCAGAAGATTTTTGAAGAGAAGC
GGGGCCCCGTTTCCATTGATGCCAGGACAGTGTCTTCACAAAAGGCACGC
TTCAGCTCCGATGCATTTCGCATGAGGAGGAAGATGGAACGACTTTCGAT
GACATCCCTTGCCAACATCAAACAAGCGAGAATGAGGCAGCGCAGGGACA
GGAGAGTTGTGAACACCTTTTGGGACATCATGTGGTTCTGCTGTTGCCTC
CTGATTGTCATCAGCATTGCTAACGAGCACCACAACACCACAGAGGGTTT
CTATCAGACACAGAGCATGACCAACACCTTTGTGCAGTCGATGGACGAGG
TAAATGATCCTCTAACCTTCTGGTCCTGGCTGTACGAGACTGCTCTTGGG
AACTTCTACCCGGAGACTTCCTACAAAGGTGACAAGCCCCGCTGGCAGGA
CAAGAGCTTCACAGCTGACATGCAGTCGGTCCTGGTCTACCCACCTAGCC
TGATCCAAGGTCGAGTACAGACAGGT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000052 | genome | Sc0000052:1512417..1514458 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97113_cuf8 |
| Biotype | protein_coding |
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