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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97112_cuf4 >transcript:BL97112_cuf4-protein ID=transcript:BL97112_cuf4-protein|Name=transcript:BL97112_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=155bp
EQTSGMATGQSTRPATPTVQLDFGGDGGSTSVYHPVTKTISEQPGDNTQG
TKLTSSRPPVGNRATPDQALGNGLDSIYAESVSPNPQDVLQKLAQIADVS
GDAAELGQPTSAAEEKAQMCRKAIKTLLSETGQAQTPQRVQKLAELSSLV
IKSCP Run BLAST on NCBI mRNA from alignment at Sc0000052:1504239..1506405+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97112_cuf4 ID=transcript:BL97112_cuf4|Name=transcript:BL97112_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=2167bp|location=Sequence derived from alignment at Sc0000052:1504239..1506405+ (Branchiostoma lanceolatum)
CTGAGCAGACAAGTGGGATGGCCACAGGCCAGTCCACCAGACCAGCAACT
CCAACCGTACAACTGGACTTTGGGGGCGATGGAGGGTCCACGTCTGTTTA
CCATCCCGTCACTAAAACCATCAGTGAGCAACCTGGAGACAATACACAAG
GTTATACAATTAGAAAATGTGTATATGAGACATTGATGCTGTTCTTCAAG
TAATTTACAATTTGTCCAGTGTACCAAAGGCATGCAGTGTGATAAAACTG
TTCTTATTCACTCACTCAGGCGTAAATTTGTACACGGTTCCTTAATCATG
ATGTTCCTTTCAGAGATTTAAGGACTGAGGCATTTAAAACCTTTTTTTTC
TATTGACAGTAAAATCTGCTCTAAGACTTAATATTTCTTTCAATGTCTTA
AATTATGGAGAACAAAAAGATGCCCATGATTCAATGCCATCTGCAAAGGG
ATTGACTAATAATACTTCAATCTCTTTCTGCTGTGCAGGAACCAAGTTGA
CCAGCAGCAGGCCGCCGGTGGGTAACAGGGCGACACCTGACCAGGTATGT
GGTTCTACAGCGGAGGGAATTTTGGGGGTGAATTATATGGTTAAAGGTCC
CCTAACCAATGAATGGAGACCATTTAACCACCATATTTGCATTTGAAAGA
CTTACAAACTATAATCATAGTTATTATAATTATTATGACTTTATGAATCA
AAAGGATTCATGATACACAGTCTACTTTATTTAATACCAATTAGAGTTTT
AGTTATCATACTTTGATGAAGGTTAGACATCCACTAATAAGATATGCCAA
AAATTGTTAGTATATATATATACGCAGTAGCAACTGGATAAAATTTTGAA
ACAGTCAGACATTTCAGATAGCATCTGCTATAATCTTTCTTTAGTCACTG
ACGAAAGACAGTGGATGCTGTCTGAAACGTCTGACTGTTTCAAAATTCTA
TCCAGTTGCTTGAGTAATTATTTTTGGCGTATTTTAGTTATCATGTCTGT
TGAAAACCTTTAAGAGTGTGTTAATCAAAAGGAAGTGACCGTGCACTGTA
CTGTAGTTGCAAGAGAAATATGAACAAAGGACTCCAAGATGTTTCATATT
AAGTACTGTCCTTTATTCTTGTTCAATAGGCTCTTGGTAACGGTCTGGAC
AGCATATATGCAGAATCCGTCTCCCCAAACCCACAGGATGTACTGCAGAA
GTTGGCTCAGGTTAGTCACACCCAGTACTACTTTGCTTCCTGTTATTCCC
TCAACAAAATGTCACAGATCTCCACCATAGTAGAATGGAACTCATTGTCA
CCAAGTACTGTAGGAGCATCTTCACTAAGTAGCTTCAAAGAACGATTGCA
GTCATGCAGATATGCAAAGACTAGGTGTAACAGACTGTTCGGTGTAGTAT
AACCAGCTACCGGTTACTAAAGCCACACCAACTTGTTCCCAGATTTTAAA
ACATGATCATGCTAGATCGGAATATCAACATGAAAACAGATCAAAGTCAG
TGGCTTGATACACACAGTTTCTGGAGTGAACAGAGTTAGAAGAAACTTTT
GCTCCAACCCTTTGTTTTCATGATTGTCCACTTGCTAAAATTCAACAGAT
GTCTGAAAACCAAATTAAATTGGTGACTGTGGCCTAATTCTAAATTCATG
ACAAACTCTTTCAATAATCTTTTTGGTGTGTGTGAAAGATTACTGTGTGA
TGAAGAAGACAAGCAAATTACCTGGACTTGTACATTATTTTAAGAACACA
CAATTAATCACAATTAATAATCATTATTACTAATTCTTTGTCCTTAATGC
AACTTTGTATTAACGACTAACTTTATTATGAAAATTTGTCTTTCATTAAT
GAGAAGATTGCGGATGTCTCTGGAGATGCTGCTGAGTTGGGGCAGCCAAC
ATCAGCTGCTGAGGAAAAGGCACAGGTAAGCCATGTTTGTAGTCTGTAAA
ATGTTAAAGCAATGGGAAACATAAATCTTTCTTTTGGAAACATGGGGACG
TTTTATGGAGTTTGGACCAGGATAAGGTGTTCAATCTTGTTATCCGTTGT
TGTAGATGTGCAGGAAGGCAATTAAAACACTGTTGTCTGAAACGGGTCAG
GCCCAGACGCCGCAACGTGTGCAAAAGCTCGCTGAGTTATCATCGCTTGT
CATTAAGTCCTGTCCTG Coding sequence (CDS) from alignment at Sc0000052:1504239..1506405+ >transcript:BL97112_cuf4 ID=transcript:BL97112_cuf4|Name=transcript:BL97112_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=2325bp|location=Sequence derived from alignment at Sc0000052:1504239..1506405+ (Branchiostoma lanceolatum)
GAGCAGACAAGTGGGATGGCCACAGGCCAGTCCACCAGACCAGCAACTCC
AACCGTACAACTGGACTTTGGGGGCGATGGAGGGTCCACGTCTGTTTACC
ATCCCGTCACTAAAACCATCAGTGAGCAACCTGGAGACAATACACAAGGA
ACCAAGTTGACCAGCAGCAGGCCGCCGGTGGGTAACAGGGCGACACCTGA
CCAGGCTCTTGGTAACGGTCTGGACAGCATATATGCAGAATCCGTCTCCC
CAAACCCACAGGATGTACTGCAGAAGTTGGCTCAGATTGCGGATGTCTCT
GGAGATGCTGCTGAGTTGGGGCAGCCAACATCAGCTGCTGAGGAAAAGGC
ACAGATGTGCAGGAAGGCAATTAAAACACTGTTGTCTGAAACGGGTCAGG
CCCAGACGCCGCAACGTGTGCAAAAGCTCGCTGAGTTATCATCGCTTGTC
ATTAAGTCCTGTCCTGAGCAGACAAGTGGGATGGCCACAGGCCAGTCCAC
CAGACCAGCAACTCCAACCGTACAACTGGACTTTGGGGGCGATGGAGGGT
CCACGTCTGTTTACCATCCCGTCACTAAAACCATCAGTGAGCAACCTGGA
GACAATACACAAGGAACCAAGTTGACCAGCAGCAGGCCGCCGGTGGGTAA
CAGGGCGACACCTGACCAGGCTCTTGGTAACGGTCTGGACAGCATATATG
CAGAATCCGTCTCCCCAAACCCACAGGATGTACTGCAGAAGTTGGCTCAG
ATTGCGGATGTCTCTGGAGATGCTGCTGAGTTGGGGCAGCCAACATCAGC
TGCTGAGGAAAAGGCACAGATGTGCAGGAAGGCAATTAAAACACTGTTGT
CTGAAACGGGTCAGGCCCAGACGCCGCAACGTGTGCAAAAGCTCGCTGAG
TTATCATCGCTTGTCATTAAGTCCTGTCCTGAGCAGACAAGTGGGATGGC
CACAGGCCAGTCCACCAGACCAGCAACTCCAACCGTACAACTGGACTTTG
GGGGCGATGGAGGGTCCACGTCTGTTTACCATCCCGTCACTAAAACCATC
AGTGAGCAACCTGGAGACAATACACAAGGAACCAAGTTGACCAGCAGCAG
GCCGCCGGTGGGTAACAGGGCGACACCTGACCAGGCTCTTGGTAACGGTC
TGGACAGCATATATGCAGAATCCGTCTCCCCAAACCCACAGGATGTACTG
CAGAAGTTGGCTCAGATTGCGGATGTCTCTGGAGATGCTGCTGAGTTGGG
GCAGCCAACATCAGCTGCTGAGGAAAAGGCACAGATGTGCAGGAAGGCAA
TTAAAACACTGTTGTCTGAAACGGGTCAGGCCCAGACGCCGCAACGTGTG
CAAAAGCTCGCTGAGTTATCATCGCTTGTCATTAAGTCCTGTCCTGAGCA
GACAAGTGGGATGGCCACAGGCCAGTCCACCAGACCAGCAACTCCAACCG
TACAACTGGACTTTGGGGGCGATGGAGGGTCCACGTCTGTTTACCATCCC
GTCACTAAAACCATCAGTGAGCAACCTGGAGACAATACACAAGGAACCAA
GTTGACCAGCAGCAGGCCGCCGGTGGGTAACAGGGCGACACCTGACCAGG
CTCTTGGTAACGGTCTGGACAGCATATATGCAGAATCCGTCTCCCCAAAC
CCACAGGATGTACTGCAGAAGTTGGCTCAGATTGCGGATGTCTCTGGAGA
TGCTGCTGAGTTGGGGCAGCCAACATCAGCTGCTGAGGAAAAGGCACAGA
TGTGCAGGAAGGCAATTAAAACACTGTTGTCTGAAACGGGTCAGGCCCAG
ACGCCGCAACGTGTGCAAAAGCTCGCTGAGTTATCATCGCTTGTCATTAA
GTCCTGTCCTGAGCAGACAAGTGGGATGGCCACAGGCCAGTCCACCAGAC
CAGCAACTCCAACCGTACAACTGGACTTTGGGGGCGATGGAGGGTCCACG
TCTGTTTACCATCCCGTCACTAAAACCATCAGTGAGCAACCTGGAGACAA
TACACAAGGAACCAAGTTGACCAGCAGCAGGCCGCCGGTGGGTAACAGGG
CGACACCTGACCAGGCTCTTGGTAACGGTCTGGACAGCATATATGCAGAA
TCCGTCTCCCCAAACCCACAGGATGTACTGCAGAAGTTGGCTCAGATTGC
GGATGTCTCTGGAGATGCTGCTGAGTTGGGGCAGCCAACATCAGCTGCTG
AGGAAAAGGCACAGATGTGCAGGAAGGCAATTAAAACACTGTTGTCTGAA
ACGGGTCAGGCCCAGACGCCGCAACGTGTGCAAAAGCTCGCTGAGTTATC
ATCGCTTGTCATTAAGTCCTGTCCT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000052 | genome | Sc0000052:1504239..1506405 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97112_cuf4 |
| Biotype | protein_coding |
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