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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97111_cuf1 >transcript:BL97111_cuf1-protein ID=transcript:BL97111_cuf1-protein|Name=transcript:BL97111_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=141bp
MSSSTDLEFVNVTDTTSTLRVTWVPPDAVVAGYRIMYGQEEATEQLNPSP
GPGERSALLEGLQPDTMYKVEIITIGVRRESLPLIGRNATEPDECATVNG
RCDHICSNVPGGYRCQCRLGFVLMADAHGCGVCGQCQGGDV Run BLAST on NCBI mRNA from alignment at Sc0000052:1500655..1502407+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97111_cuf1 ID=transcript:BL97111_cuf1|Name=transcript:BL97111_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=1753bp|location=Sequence derived from alignment at Sc0000052:1500655..1502407+ (Branchiostoma lanceolatum)
CAGCTGTGGATCCACCAGTGAACCTGAACGTTACTGACATCATGGATGAA
GGGTTCAACGTCACCTGGTCTCCATCCCCCGACCCTGACCTTCAGGGATA
TCGTGTGGAGGTGTCCGAGCTGGACATGACGACATCCGTCAATCAAAGCA
CGGATCAGACATGGCTCCAGGTGGCGGGACTGACCCCGGAAACTGATTAC
ATCATCGGGGTGACAGTGTTGGTCCTGTCTGATGGTCGCTGGTCACAGAG
CAATGCGACAACAGCGGAGGCAACCACAAGTAAGGACAGCCTACTTCTGA
TTCGTGGATACAACAAAAATAAGGTCGTTAACAGACTGAAATGCAGGTCT
TTGTGACAGGAACATTCTAACAAGTTTTTTGTTATAAAATTATGTTTAAA
GTATCGGGTCCATACAGGTATAGAAAAGTGGTTGATATTATGTTGCAAAA
TATCAAAAGGAAAAAGTTGGCTTTAGACTAAATAATTAGTTTATTGCCAA
TTTTGGCCCATTAAGCTACATGTAATTGCTCGACAGTACATGTAACAGGA
TAGACACAATCATGGAATGAAACTAAACGAATTCCTTTAAATTCCCCACA
TCATCAAATAAGTTCATCATGTGTGGAGAAGACACTAATTTTGCCGTTCA
GTTTCAGTAATGAGCTCCTCTACAGACCTGGAGTTCGTTAATGTGACCGA
CACGACGTCCACGCTGAGGGTCACCTGGGTGCCTCCTGATGCGGTCGTTG
CCGGATACCGCATCATGTATGGACAGGAGGAGGCGACGGAACAGCTCAAC
CCCTCCCCGGGTCCAGGAGAGAGATCTGCTCTGCTTGAGGGCCTCCAGCC
AGACACCATGTACAAGGTGGAGATCATCACCATCGGAGTTCGCCGAGAGA
GTCTGCCTCTGATTGGACGAAACGCGACTGGTGAGCACATCTAACATCTT
CTATCTATGATGATACGGATTCAGATATTCAAGAGCACTGGTTACACCAT
ACGGTTCCCCTGCAATACCCTTTATTTAATTCACTGTTTGATTCCACTGA
ATGCAAAACCTTCGGACTCAACTTTTTTTGACATCTCAGCTACAAAGCTC
TTTACTCTACATCAACAAGGGAGCCAGCAGCAAGACATTCAATTTGACAG
ATAAAAAATTTCATCCTCGAGAATTGTAGCCTTTGTATACTATAGCGGTA
AGGTTTCTTGTACTGTAGATGAATCAGACCCAGGCCCCTGCATTTGTTCT
CTTTGTGTATCGTGTAGAGCCCGACGAATGTGCGACAGTGAACGGCCGGT
GTGACCACATCTGCTCCAACGTTCCGGGAGGGTACAGGTGCCAATGTCGC
CTGGGCTTTGTGCTGATGGCAGACGCCCACGGCTGTGGAGGTAAAACAAG
TTGTTGTAGTTTATTACACAGTGATAAATGTTACACACAATGTGAATAAT
GCAATTATTAGTTATTCTATACATCACCTGCAGTTCATGATTTATCAAGC
AGCTTATTCTCACAATTGGCACTTACCGTCATCATATGAGGGTAATTACC
TTCATCATATTACACTTTTCTGTATGGCTGTTATGTATTTGTTAACCCTA
AATGTAAGCATAACAATGTAATTATTTAACCTGCAACATTTTTAAAAATT
GACAATCTAGAAAAGGCAACATGGCATTGTCTACTACATTGTGTTGTGTT
GATACCGTGTTTTTTGTTTGTAAGTGTGCGGCCAATGCCAAGGTGGGGAC
GTC Coding sequence (CDS) from alignment at Sc0000052:1500655..1502407+ >transcript:BL97111_cuf1 ID=transcript:BL97111_cuf1|Name=transcript:BL97111_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=1269bp|location=Sequence derived from alignment at Sc0000052:1500655..1502407+ (Branchiostoma lanceolatum)
ATGAGCTCCTCTACAGACCTGGAGTTCGTTAATGTGACCGACACGACGTC
CACGCTGAGGGTCACCTGGGTGCCTCCTGATGCGGTCGTTGCCGGATACC
GCATCATGTATGGACAGGAGGAGGCGACGGAACAGCTCAACCCCTCCCCG
GGTCCAGGAGAGAGATCTGCTCTGCTTGAGGGCCTCCAGCCAGACACCAT
GTACAAGGTGGAGATCATCACCATCGGAGTTCGCCGAGAGAGTCTGCCTC
TGATTGGACGAAACGCGACTGAGCCCGACGAATGTGCGACAGTGAACGGC
CGGTGTGACCACATCTGCTCCAACGTTCCGGGAGGGTACAGGTGCCAATG
TCGCCTGGGCTTTGTGCTGATGGCAGACGCCCACGGCTGTGGAGTGTGCG
GCCAATGCCAAGGTGGGGACGTCATGAGCTCCTCTACAGACCTGGAGTTC
GTTAATGTGACCGACACGACGTCCACGCTGAGGGTCACCTGGGTGCCTCC
TGATGCGGTCGTTGCCGGATACCGCATCATGTATGGACAGGAGGAGGCGA
CGGAACAGCTCAACCCCTCCCCGGGTCCAGGAGAGAGATCTGCTCTGCTT
GAGGGCCTCCAGCCAGACACCATGTACAAGGTGGAGATCATCACCATCGG
AGTTCGCCGAGAGAGTCTGCCTCTGATTGGACGAAACGCGACTGAGCCCG
ACGAATGTGCGACAGTGAACGGCCGGTGTGACCACATCTGCTCCAACGTT
CCGGGAGGGTACAGGTGCCAATGTCGCCTGGGCTTTGTGCTGATGGCAGA
CGCCCACGGCTGTGGAGTGTGCGGCCAATGCCAAGGTGGGGACGTCATGA
GCTCCTCTACAGACCTGGAGTTCGTTAATGTGACCGACACGACGTCCACG
CTGAGGGTCACCTGGGTGCCTCCTGATGCGGTCGTTGCCGGATACCGCAT
CATGTATGGACAGGAGGAGGCGACGGAACAGCTCAACCCCTCCCCGGGTC
CAGGAGAGAGATCTGCTCTGCTTGAGGGCCTCCAGCCAGACACCATGTAC
AAGGTGGAGATCATCACCATCGGAGTTCGCCGAGAGAGTCTGCCTCTGAT
TGGACGAAACGCGACTGAGCCCGACGAATGTGCGACAGTGAACGGCCGGT
GTGACCACATCTGCTCCAACGTTCCGGGAGGGTACAGGTGCCAATGTCGC
CTGGGCTTTGTGCTGATGGCAGACGCCCACGGCTGTGGAGTGTGCGGCCA
ATGCCAAGGTGGGGACGTC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000052 | genome | Sc0000052:1500655..1502407 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97111_cuf1 |
| Biotype | protein_coding |
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