|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97106_cuf8 >transcript:BL97106_cuf8-protein ID=transcript:BL97106_cuf8-protein|Name=transcript:BL97106_cuf8|organism=Branchiostoma lanceolatum|type=polypeptide|length=271bp
PNTGFLMATELQLSPGGHYRSALKFCHQDGCFQPTASDGFWVTSQPPVPN
EISSINYDEANMSLSFSWNEFVTVELTGNEALQTMAMGGYEWTLSVTGKE
SSALGTVLYPWQPIVDLKSSGQNVTATVALPNHLEFTTCIKLLLRGRNKA
GLYSVTSREIHDCNDPGSVNIRDPVVFDAVPDFNATLAEKSGISLSTNHF
WTVPDEDFTRSRDTLAAAWPSLRHGNYYWKVLSADSIERWSYHRHGNEIN
YHSFRCDEPETLRCGQTKVRK Run BLAST on NCBI mRNA from alignment at Sc0000001:3575070..3576784- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97106_cuf8 ID=transcript:BL97106_cuf8|Name=transcript:BL97106_cuf8|organism=Branchiostoma lanceolatum|type=mRNA|length=1715bp|location=Sequence derived from alignment at Sc0000001:3575070..3576784- (Branchiostoma lanceolatum)
CTCCCAACACCGGTTTCCTCATGGCCACGGAGTTACAGCTATCACCAGGC
GGGCACTACCGTTCCGCGCTGAAGTTCTGCCACCAAGATGGCTGCTTCCA
ACCTACGGCGTCCGACGGATTCTGGGTAACATCACAACCACCGGTGCCAA
ACGAAATCAGCAGTATAAACTATGACGAAGCCAACATGTCACTGTCTTTT
TCGTGGAACGAGTTCGTCACCGTAGAGTTGACAGGGAACGAGGCGCTGCA
GACGATGGCTATGGGTGGCTATGAGTGGACACTGTCCGTGACTGGGAAGG
AGAGCTCGGCACTGGGAACGGTCTTGTATCCATGGCAACCTATCGTGGAC
TTGAAAAGTTCAGGACAAAATGTGAGCAAATCTGTGTTTGAATTGTAGAA
CTTATTCATATGACACTACCAAACTGCTGACTATTTACATATTACTGTGA
TTCGTAGCAATACATTTTCAGACAGGAAAAGATCTTTGAATTAAACACTT
ACTAATAGTTAGATACTTCATACCATGTTCAATTAAAACCTTAGATGACT
GAAGAATATCTTTAAGCTTGTGAAAACACAAAATGCTGTGAGGGACTCAG
ATATGGCTAACAATGATAGTTGCTATAAAGCTGTCTTGCTAGATATGAAA
ATTAAGATCACTGGTCACGTCATCTCTTTTTCTAAGCTTGGAATAAATGG
CTAAAATATATTAATGTAGAGTCCGACCTATGCCATTTCATATGCTTCAT
GATCACTAATTTCACAACAGGTAACAGCTACTGTGGCCCTCCCCAACCAT
CTGGAGTTCACCACCTGTATAAAACTCCTTCTCCGTGGAAGGAACAAGGC
GGGACTTTACTCTGTGACGTCACGGGAGATTCACGACTGCAACGATCCCG
GGTCTGTCAACATCCGGGACCCTGTCGTCTTTGACGCCGTTCCGGATTTT
AACGCAACATTGGCTGAAAAAAGGTAAGGTGACGTTACATTGTTAGATGC
ATGGATAGACAATAGCTGTATTATTATAACACAAAAAGCATAGTAGCTAT
GTAAGTTACCTTCTTGTTGTTAATCTCTATCCATGTTTCCCTGTTTTCTT
TTCTAAATGTAAATTTTTTTCTGTCTATGCCAGAATTCCAATTCCCTTTT
ATATTGTCTCTTTTGGCTCTTTGTGATAGCCACAGGCTATTTGGACAGCC
CTGGTTGAGCGTGCTGAACAGCCAAACCAATAAACAAATAACTAAATAAA
CTTCTTTCCCCTACAGCGGCATCTCATTATCCACGAACCATTTCTGGACG
GTCCCAGACGAGGACTTCACTCGTTCCCGGGACACCCTGGCCGCCGCCTG
GCCCTCCCTGAGACACGGGAACTACTACTGGAAGGTTCTCTCCGCGGATT
CCATCGAGCGCTGGTCATACCACAGACACGGGAACGAGATCAACTATCAC
TCCTTCCGCTGTGACGAACCAGAGACACTAAGATGTGGTCAAACAAAGGT
AAGGAAATGAAATGCAAAAGTTAAAAAGACAGTCGAAGGTAAAGTTTTTC
TGACACAGCCAGTTTTCCACCATGTTTCTGCAAGAATTCAGCAATTCAGT
GGTTGCTATGCATCAAACAACATTACCTTCAAATAGTGGTTACCTACTGA
TCTGATAAATCTATTCATGGAACGACAAAAACAGTGTTGAATAGTATTTC
CTTTTGAAATTCTTC Coding sequence (CDS) from alignment at Sc0000001:3575070..3576784- >transcript:BL97106_cuf8 ID=transcript:BL97106_cuf8|Name=transcript:BL97106_cuf8|organism=Branchiostoma lanceolatum|type=CDS|length=2448bp|location=Sequence derived from alignment at Sc0000001:3575070..3576784- (Branchiostoma lanceolatum)
CCCAACACCGGTTTCCTCATGGCCACGGAGTTACAGCTATCACCAGGCGG
GCACTACCGTTCCGCGCTGAAGTTCTGCCACCAAGATGGCTGCTTCCAAC
CTACGGCGTCCGACGGATTCTGGGTAACATCACAACCACCGGTGCCAAAC
GAAATCAGCAGTATAAACTATGACGAAGCCAACATGTCACTGTCTTTTTC
GTGGAACGAGTTCGTCACCGTAGAGTTGACAGGGAACGAGGCGCTGCAGA
CGATGGCTATGGGTGGCTATGAGTGGACACTGTCCGTGACTGGGAAGGAG
AGCTCGGCACTGGGAACGGTCTTGTATCCATGGCAACCTATCGTGGACTT
GAAAAGTTCAGGACAAAATGTAACAGCTACTGTGGCCCTCCCCAACCATC
TGGAGTTCACCACCTGTATAAAACTCCTTCTCCGTGGAAGGAACAAGGCG
GGACTTTACTCTGTGACGTCACGGGAGATTCACGACTGCAACGATCCCGG
GTCTGTCAACATCCGGGACCCTGTCGTCTTTGACGCCGTTCCGGATTTTA
ACGCAACATTGGCTGAAAAAAGCGGCATCTCATTATCCACGAACCATTTC
TGGACGGTCCCAGACGAGGACTTCACTCGTTCCCGGGACACCCTGGCCGC
CGCCTGGCCCTCCCTGAGACACGGGAACTACTACTGGAAGGTTCTCTCCG
CGGATTCCATCGAGCGCTGGTCATACCACAGACACGGGAACGAGATCAAC
TATCACTCCTTCCGCTGTGACGAACCAGAGACACTAAGATGTGGTCAAAC
AAAGGTAAGGAAATGACCCAACACCGGTTTCCTCATGGCCACGGAGTTAC
AGCTATCACCAGGCGGGCACTACCGTTCCGCGCTGAAGTTCTGCCACCAA
GATGGCTGCTTCCAACCTACGGCGTCCGACGGATTCTGGGTAACATCACA
ACCACCGGTGCCAAACGAAATCAGCAGTATAAACTATGACGAAGCCAACA
TGTCACTGTCTTTTTCGTGGAACGAGTTCGTCACCGTAGAGTTGACAGGG
AACGAGGCGCTGCAGACGATGGCTATGGGTGGCTATGAGTGGACACTGTC
CGTGACTGGGAAGGAGAGCTCGGCACTGGGAACGGTCTTGTATCCATGGC
AACCTATCGTGGACTTGAAAAGTTCAGGACAAAATGTAACAGCTACTGTG
GCCCTCCCCAACCATCTGGAGTTCACCACCTGTATAAAACTCCTTCTCCG
TGGAAGGAACAAGGCGGGACTTTACTCTGTGACGTCACGGGAGATTCACG
ACTGCAACGATCCCGGGTCTGTCAACATCCGGGACCCTGTCGTCTTTGAC
GCCGTTCCGGATTTTAACGCAACATTGGCTGAAAAAAGCGGCATCTCATT
ATCCACGAACCATTTCTGGACGGTCCCAGACGAGGACTTCACTCGTTCCC
GGGACACCCTGGCCGCCGCCTGGCCCTCCCTGAGACACGGGAACTACTAC
TGGAAGGTTCTCTCCGCGGATTCCATCGAGCGCTGGTCATACCACAGACA
CGGGAACGAGATCAACTATCACTCCTTCCGCTGTGACGAACCAGAGACAC
TAAGATGTGGTCAAACAAAGGTAAGGAAATGACCCAACACCGGTTTCCTC
ATGGCCACGGAGTTACAGCTATCACCAGGCGGGCACTACCGTTCCGCGCT
GAAGTTCTGCCACCAAGATGGCTGCTTCCAACCTACGGCGTCCGACGGAT
TCTGGGTAACATCACAACCACCGGTGCCAAACGAAATCAGCAGTATAAAC
TATGACGAAGCCAACATGTCACTGTCTTTTTCGTGGAACGAGTTCGTCAC
CGTAGAGTTGACAGGGAACGAGGCGCTGCAGACGATGGCTATGGGTGGCT
ATGAGTGGACACTGTCCGTGACTGGGAAGGAGAGCTCGGCACTGGGAACG
GTCTTGTATCCATGGCAACCTATCGTGGACTTGAAAAGTTCAGGACAAAA
TGTAACAGCTACTGTGGCCCTCCCCAACCATCTGGAGTTCACCACCTGTA
TAAAACTCCTTCTCCGTGGAAGGAACAAGGCGGGACTTTACTCTGTGACG
TCACGGGAGATTCACGACTGCAACGATCCCGGGTCTGTCAACATCCGGGA
CCCTGTCGTCTTTGACGCCGTTCCGGATTTTAACGCAACATTGGCTGAAA
AAAGCGGCATCTCATTATCCACGAACCATTTCTGGACGGTCCCAGACGAG
GACTTCACTCGTTCCCGGGACACCCTGGCCGCCGCCTGGCCCTCCCTGAG
ACACGGGAACTACTACTGGAAGGTTCTCTCCGCGGATTCCATCGAGCGCT
GGTCATACCACAGACACGGGAACGAGATCAACTATCACTCCTTCCGCTGT
GACGAACCAGAGACACTAAGATGTGGTCAAACAAAGGTAAGGAAATGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000001 | genome | Sc0000001:3575070..3576784 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97106_cuf8 |
| Biotype | protein_coding |
|
