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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97101_cuf7 >transcript:BL97101_cuf7-protein ID=transcript:BL97101_cuf7-protein|Name=transcript:BL97101_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=271bp
LRKRLTEQDEDQLREWLNKPDAGFELLFKASTQGYNPQKFHQRCNNKGPT
VTVAYNATGWVFGGYASESWTSRGGWVQAPDSFLFCLSNANKFDPLKFPS
DGSGHCLHDHQSYGPTFGRGHDFLTFNGNFPANNGNFVGTNGQGNLGNTY
GAGMGHNVNSFCGADLDFLDVEVYSIGKIKRQGKMEIPVKEKMLQKEKEW
RKVQWSDEERGRLKQQVAGYKPRSCMSVSQVNVLLVGQVGSGKSSFFNTI
NSIYKGRVSSQAMAGRQPHSL Run BLAST on NCBI mRNA from alignment at Sc0000001:7228074..7230132+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97101_cuf7 ID=transcript:BL97101_cuf7|Name=transcript:BL97101_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=2059bp|location=Sequence derived from alignment at Sc0000001:7228074..7230132+ (Branchiostoma lanceolatum)
CTGCGGAAGCGTCTGACTGAACAGGACGAGGATCAACTGCGGGAGTGGTT
GAACAAACCTGATGCAGGTTTTGAGCTTCTGTTCAAAGCCTCCACACAGG
GCTACAATCCTCAAAAGTTCCACCAACGCTGTAACAATAAGGGCCCTACA
GTCACAGTCGCATATAACGCGACTGGATGGGTGTTTGGGGGGTACGCGAG
TGAATCGTGGACCAGCCGGGGTGGCTGGGTTCAAGCCCCGGATTCTTTCC
TCTTCTGTCTTTCTAACGCCAACAAATTCGATCCTTTGAAGTTTCCATCA
GACGGCTCGGGGCATTGTCTTCATGACCATCAGAGTTATGGCCCTACTTT
CGGTCGTGGTCACGACTTCTTGACCTTCAATGGCAACTTCCCAGCGAATA
ATGGAAATTTTGTCGGCACCAACGGGCAGGGCAACCTTGGCAACACTTAC
GGCGCTGGGATGGGGCACAACGTCAACAGTTTTTGTGGAGCCGATCTCGA
CTTCCTCGACGTAGAGGTGTACTCCATTGGAAGTGAGTATGTAAGCATGC
TCTTGAGTTAAGTTAGAGTTTCTGTCAGATCGGTAATCGTCTGATTCCAT
AATTCTGTATAGAAAAACATCGTCAAAAGTATCAGCCATTTTCAAACAAG
TTAAAGTGTCGGGGTATGTCAGCTCTCATTATCAACTGTAACTTAACTCC
TTCAGATATTTGAGAAGTATTGGATTCACCTAAAGGTTTTGCGTTTGGAT
GTCCTCCGACGGCAGTGCATGTTGTGACGCAAGTACGTTCTTTTATGACT
TGTCGTGTTTTGGGGATACCGGGTACAGGCGTCCTATTGGTTATAGAGGT
AAACAAAACATAGATGTCACCATCACAGTTGACAATTGTTTCCAGTGGTA
CACAAGAAGCAGTGGCTCAGTCTGTTTTGATCCTTTTACAGAGATAAAGA
GGCAAGGGAAGATGGAGATCCCAGTGAAGGAAAAGATGCTGCAGAAAGAA
AAAGAGTGGAGGAAAGTTCAGTGGAGTGACGAGTAAGTGACAAGGAGTGA
GGAGTGACAAATAACTAAAATCTAACTTCTAGATGCATATAGTCAGCCTT
TACCTTGTTATTAATCTTTTCTAATGAACTAGCTTACATGAGTTCTGTTG
CGTGTTTCTTTTTCTGTTTTTATGATGATTGGTGGTGTGTTTATGAGTAC
TGATGACTATTGTTGCTGCAGAAAGAAGAGACAATCAAATTAGATGTTTA
GACTAATATCGATATTTCTAAGGTGGTGTTAGAAGCATCAACTAGAGTTC
CACGACCTCATGACTTCGCTGACGTATTATTAGTGCTTCTCATCAATTAT
AAATCATACCAGTTGATCATCTTCCCCACCCAAATAACAGAAGTTACCCA
AAGTATGAGTTTAACAAAGAAGGTTATGCTAACATTTATCATCAATTATG
CAAATGAGGGCCATCATGACCATCCATCAAGCTCTTCTTGAGGTATTCCC
TTTCAAAGTCTGAAGCAAAACCTGCTCCTTCAGTTAAAACAAGTCTGTAG
GGGACCCAAACCTATACCACCTACTCTCTGTAGCTAACTACCACTACAGA
GACCAAGGCAGGACCAAAGCATGTGCAGAACACGAGATATCAAAACAGAA
AGTTCCGATGCAGTACCGTAACACGCCGCTAGGGGGCCCTAGATCTAATC
ATCTCCCGTTCTCATTAAGACCTATCCACATACCAAATATCAAGACAATC
CATCCAGGCCTGCTCGAGTTATGCTGGACTTCTACACAGATACATACAAA
TGCTACCCAAAACATAACCTTCTTGGCGAAGGTAACAACACGCACTTCAC
TGTTATTACTCACACAGGGAACGAGGCCGCCTGAAGCAGCAGGTAGCTGG
GTACAAGCCGAGGTCATGTATGTCCGTTAGCCAGGTGAACGTCCTGCTGG
TCGGACAGGTGGGTTCTGGGAAGTCCAGCTTCTTCAACACCATCAACTCC
ATCTACAAGGGCCGTGTGTCCAGCCAGGCCATGGCGGGCAGACAGCCGCA
CAGCCTCAC Coding sequence (CDS) from alignment at Sc0000001:7228074..7230132+ >transcript:BL97101_cuf7 ID=transcript:BL97101_cuf7|Name=transcript:BL97101_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=2439bp|location=Sequence derived from alignment at Sc0000001:7228074..7230132+ (Branchiostoma lanceolatum)
CTGCGGAAGCGTCTGACTGAACAGGACGAGGATCAACTGCGGGAGTGGTT
GAACAAACCTGATGCAGGTTTTGAGCTTCTGTTCAAAGCCTCCACACAGG
GCTACAATCCTCAAAAGTTCCACCAACGCTGTAACAATAAGGGCCCTACA
GTCACAGTCGCATATAACGCGACTGGATGGGTGTTTGGGGGGTACGCGAG
TGAATCGTGGACCAGCCGGGGTGGCTGGGTTCAAGCCCCGGATTCTTTCC
TCTTCTGTCTTTCTAACGCCAACAAATTCGATCCTTTGAAGTTTCCATCA
GACGGCTCGGGGCATTGTCTTCATGACCATCAGAGTTATGGCCCTACTTT
CGGTCGTGGTCACGACTTCTTGACCTTCAATGGCAACTTCCCAGCGAATA
ATGGAAATTTTGTCGGCACCAACGGGCAGGGCAACCTTGGCAACACTTAC
GGCGCTGGGATGGGGCACAACGTCAACAGTTTTTGTGGAGCCGATCTCGA
CTTCCTCGACGTAGAGGTGTACTCCATTGGAAAGATAAAGAGGCAAGGGA
AGATGGAGATCCCAGTGAAGGAAAAGATGCTGCAGAAAGAAAAAGAGTGG
AGGAAAGTTCAGTGGAGTGACGAGGAACGAGGCCGCCTGAAGCAGCAGGT
AGCTGGGTACAAGCCGAGGTCATGTATGTCCGTTAGCCAGGTGAACGTCC
TGCTGGTCGGACAGGTGGGTTCTGGGAAGTCCAGCTTCTTCAACACCATC
AACTCCATCTACAAGGGCCGTGTGTCCAGCCAGGCCATGGCGGGCAGACA
GCCGCACAGCCTCCTGCGGAAGCGTCTGACTGAACAGGACGAGGATCAAC
TGCGGGAGTGGTTGAACAAACCTGATGCAGGTTTTGAGCTTCTGTTCAAA
GCCTCCACACAGGGCTACAATCCTCAAAAGTTCCACCAACGCTGTAACAA
TAAGGGCCCTACAGTCACAGTCGCATATAACGCGACTGGATGGGTGTTTG
GGGGGTACGCGAGTGAATCGTGGACCAGCCGGGGTGGCTGGGTTCAAGCC
CCGGATTCTTTCCTCTTCTGTCTTTCTAACGCCAACAAATTCGATCCTTT
GAAGTTTCCATCAGACGGCTCGGGGCATTGTCTTCATGACCATCAGAGTT
ATGGCCCTACTTTCGGTCGTGGTCACGACTTCTTGACCTTCAATGGCAAC
TTCCCAGCGAATAATGGAAATTTTGTCGGCACCAACGGGCAGGGCAACCT
TGGCAACACTTACGGCGCTGGGATGGGGCACAACGTCAACAGTTTTTGTG
GAGCCGATCTCGACTTCCTCGACGTAGAGGTGTACTCCATTGGAAAGATA
AAGAGGCAAGGGAAGATGGAGATCCCAGTGAAGGAAAAGATGCTGCAGAA
AGAAAAAGAGTGGAGGAAAGTTCAGTGGAGTGACGAGGAACGAGGCCGCC
TGAAGCAGCAGGTAGCTGGGTACAAGCCGAGGTCATGTATGTCCGTTAGC
CAGGTGAACGTCCTGCTGGTCGGACAGGTGGGTTCTGGGAAGTCCAGCTT
CTTCAACACCATCAACTCCATCTACAAGGGCCGTGTGTCCAGCCAGGCCA
TGGCGGGCAGACAGCCGCACAGCCTCCTGCGGAAGCGTCTGACTGAACAG
GACGAGGATCAACTGCGGGAGTGGTTGAACAAACCTGATGCAGGTTTTGA
GCTTCTGTTCAAAGCCTCCACACAGGGCTACAATCCTCAAAAGTTCCACC
AACGCTGTAACAATAAGGGCCCTACAGTCACAGTCGCATATAACGCGACT
GGATGGGTGTTTGGGGGGTACGCGAGTGAATCGTGGACCAGCCGGGGTGG
CTGGGTTCAAGCCCCGGATTCTTTCCTCTTCTGTCTTTCTAACGCCAACA
AATTCGATCCTTTGAAGTTTCCATCAGACGGCTCGGGGCATTGTCTTCAT
GACCATCAGAGTTATGGCCCTACTTTCGGTCGTGGTCACGACTTCTTGAC
CTTCAATGGCAACTTCCCAGCGAATAATGGAAATTTTGTCGGCACCAACG
GGCAGGGCAACCTTGGCAACACTTACGGCGCTGGGATGGGGCACAACGTC
AACAGTTTTTGTGGAGCCGATCTCGACTTCCTCGACGTAGAGGTGTACTC
CATTGGAAAGATAAAGAGGCAAGGGAAGATGGAGATCCCAGTGAAGGAAA
AGATGCTGCAGAAAGAAAAAGAGTGGAGGAAAGTTCAGTGGAGTGACGAG
GAACGAGGCCGCCTGAAGCAGCAGGTAGCTGGGTACAAGCCGAGGTCATG
TATGTCCGTTAGCCAGGTGAACGTCCTGCTGGTCGGACAGGTGGGTTCTG
GGAAGTCCAGCTTCTTCAACACCATCAACTCCATCTACAAGGGCCGTGTG
TCCAGCCAGGCCATGGCGGGCAGACAGCCGCACAGCCTC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000001 | genome | Sc0000001:7228074..7230132 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97101_cuf7 |
| Biotype | protein_coding |
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