|
|
Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97092_cuf7 >transcript:BL97092_cuf7-protein ID=transcript:BL97092_cuf7-protein|Name=transcript:BL97092_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=256bp
LDIDECSSQPCFNNGTCVDAVNSFSCQCPVGYTSDLCEIDIDECESDPCQ
NGATCLDQVGSYTCVCAPAFSGANCETEVPSDFNLEFESSGTVDYVMIDS
IPSLKALTCAFWMRSTDKQNYGTPLSYATSLEDNTFVLTDYNGFVLYIGG
NSKVTDVTANDGRWHHICVTWTSEGGVWRIYKNGYPVDEGQGLGTDSVIP
GGGAFVLGQEQDSLGGDFNAPQSFIGQMSLLQLWDYVLSEDDVFTMATTC
QKNVGN Run BLAST on NCBI mRNA from alignment at Sc0000001:7090445..7092864- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97092_cuf7 ID=transcript:BL97092_cuf7|Name=transcript:BL97092_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=2420bp|location=Sequence derived from alignment at Sc0000001:7090445..7092864- (Branchiostoma lanceolatum)
CTTGGATATCGATGAGTGTTCCAGTCAACCCTGTTTCAACAACGGAACCT
GTGTTGATGCTGTCAACTCCTTTAGGTGAGTTTGTTACCTGCCATACTAT
TCATGGCTGCTAGGGGTCTCTTTTAGACTTTCAATACAAGCACTTACAAG
TCTTTCATACCTTCATTCATTGTAGGTCAATCGATATTTACTGCTACCAT
GGGATGAATTATACTCAAAATGGTCTTCATTTGTCAAATAAGGAATTCTC
TCCTAACAGGATTTTCCTTTTTTAAGAAGTTATATAATTTTTTTTTCTAC
CTCAGCTGCCAATGCCCGGTGGGATACACCTCTGATCTGTGTGAGATCGA
CATTGATGAGTGTGAGTCTGATCCCTGTCAGAACGGTGCCACCTGCCTGG
ACCAGGTGGGCAGCTACACCTGTGTGTGCGCACCTGCCTTCTCAGGCGCC
AACTGTGAGACAGGTGAGTGCGATGTTCACTGTCATTTTCACTGTAAATA
GTTGTTCAAACCACAACCTCCTAATCCTCCAGGTTACATAAATCTGCCAC
TTTGAAAAACAGTGGGCTAGAGACATCTCTAGTGCAGCACCCCCAGGTAT
GTACAGGTTTTATGTACAGGAGTCCATTATACTATGGGATGTTGGGTTGG
AGATCTGTTTGGACGTACGTTTTCTTGGTGGCTGAATTATGTGATGGAAT
TATGTTTTAGTAGATGTTAATCCTTTTGTAGGTAATGAAATGCTCAAGGT
ATGCTGATAGCCCTTTTTTTTTACAACAATAACTACATGTACAACAAATG
TATCTGATTTTTCTTGCAGAGGTGCCCTCGGATTTCAACCTTGAGTTTGA
GAGCTCTGGAACCGTTGATTACGTGATGATTGACAGCATCCCATCACTGA
AGGCGCTGACGTGTGCCTTCTGGATGCGCAGCACGGACAAGCAGAACTAC
GGGACCCCGCTGTCTTACGCAACAAGCCTAGAGGACAACACATTTGTGCT
GACAGACTATAATGGGTTAGTTACCTTTGCCAAGAAGGTTATGTTTTGGG
GAGCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAAAT
TATGATTATTTGCATGATAAATGAAAAACACATGATACATCAGTCAAAAA
GGTTAGAATCATTTGGCAAAAGTGTGAGATCGTGGAACTCTTAGACTAGT
TGTTTTGCAGCCATACATTTCACCTTTATCTTACCTTCCCAGTCATAATC
ATCACTTGAATTTGTTCTACAGGCTTAGGTTTTTCTGATGTTGGTAAGTA
TGAAAATGAATGAATATTTCATGGAGATATGAGGTCTTTTTGAACTCTTG
TTGGTTTTGCAGCCATACATCTCATTTTTATCTTCTAAATACTAACCATT
ACAAAGTCTTTAACTTTTTCTACAAGACTAGTACAAGCTTAGGAATTTTC
TGATGTTGGTAAGATGATGAAAATGAATGAATATTTTGTGAAAAGCTCGT
GATGTTCCCATCTGGAATAAAAAGCTGTTCTTTTTCAATATTTTATTTCA
GTTTTGTGCTGTACATCGGTGGGAACAGCAAGGTGACAGACGTGACAGCA
AACGACGGTCGCTGGCATCACATCTGTGTCACGTGGACCTCAGAGGGAGG
GGTGTGGAGGATCTACAAAAATGGCTACCCGGTGGACGAGGGACAGGGAC
TGGGAACGGACAGTGTTATACCAGGTGAGAGATGTAATGGTGATGATGCG
CTGTGCTCTGCAGCTACATGTACATGTGTGTGTAGAAATATGCCACAGCT
CTCTTCATTTTGTTCTATTGTGATGACTCCATATAAAGGGGAGCACAAAC
TGGTCGTGTGGTTGGAAATAACAACTTAGATTGGAGGTTCAACCCCGTTG
AATACCACTGGTAGAGGTAGCAGTCCTTCATAGGGATTAACTAGGACACC
AGTCCTGTGTATGAGAAGACCCACACCTTGCCATGGTCAAGATCTAAGCA
GCATGCTCAAGCAAGAAAGAAGTACCAGGACAATGCTGGAGTGTGTGATC
ATGATGGTTAAAGAAAAAAGTGACAGACAAAAGAGATTGAGATTTGAAAC
TTAGTTTAAACACCAAAATTAATGATTCTTGATGCTTAATTGACTGAATC
ACTGAAAATGATCTTGTTTGATTGAGACGTACTTGAAAATATCTTATATC
ATCATTCCTGTCATTCTTATTTGTGGTGCTCATCTTGCTGTTGTTGTTTA
CAGGAGGAGGTGCTTTTGTCTTGGGACAAGAACAGGACTCGCTAGGAGGA
GACTTCAACGCCCCCCAGTCGTTCATCGGTCAGATGAGCCTCCTACAACT
GTGGGACTACGTCCTGTCAGAGGATGACGTCTTCACCATGGCAACCACCT
GTCAGAAGAATGTGGGAAAT Coding sequence (CDS) from alignment at Sc0000001:7090445..7092864- >transcript:BL97092_cuf7 ID=transcript:BL97092_cuf7|Name=transcript:BL97092_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=3840bp|location=Sequence derived from alignment at Sc0000001:7090445..7092864- (Branchiostoma lanceolatum)
TTGGATATCGATGAGTGTTCCAGTCAACCCTGTTTCAACAACGGAACCTG
TGTTGATGCTGTCAACTCCTTTAGCTGCCAATGCCCGGTGGGATACACCT
CTGATCTGTGTGAGATCGACATTGATGAGTGTGAGTCTGATCCCTGTCAG
AACGGTGCCACCTGCCTGGACCAGGTGGGCAGCTACACCTGTGTGTGCGC
ACCTGCCTTCTCAGGCGCCAACTGTGAGACAGAGGTGCCCTCGGATTTCA
ACCTTGAGTTTGAGAGCTCTGGAACCGTTGATTACGTGATGATTGACAGC
ATCCCATCACTGAAGGCGCTGACGTGTGCCTTCTGGATGCGCAGCACGGA
CAAGCAGAACTACGGGACCCCGCTGTCTTACGCAACAAGCCTAGAGGACA
ACACATTTGTGCTGACAGACTATAATGGTTTTGTGCTGTACATCGGTGGG
AACAGCAAGGTGACAGACGTGACAGCAAACGACGGTCGCTGGCATCACAT
CTGTGTCACGTGGACCTCAGAGGGAGGGGTGTGGAGGATCTACAAAAATG
GCTACCCGGTGGACGAGGGACAGGGACTGGGAACGGACAGTGTTATACCA
GGAGGAGGTGCTTTTGTCTTGGGACAAGAACAGGACTCGCTAGGAGGAGA
CTTCAACGCCCCCCAGTCGTTCATCGGTCAGATGAGCCTCCTACAACTGT
GGGACTACGTCCTGTCAGAGGATGACGTCTTCACCATGGCAACCACCTGT
CAGAAGAATGTGGGAAATTTGGATATCGATGAGTGTTCCAGTCAACCCTG
TTTCAACAACGGAACCTGTGTTGATGCTGTCAACTCCTTTAGCTGCCAAT
GCCCGGTGGGATACACCTCTGATCTGTGTGAGATCGACATTGATGAGTGT
GAGTCTGATCCCTGTCAGAACGGTGCCACCTGCCTGGACCAGGTGGGCAG
CTACACCTGTGTGTGCGCACCTGCCTTCTCAGGCGCCAACTGTGAGACAG
AGGTGCCCTCGGATTTCAACCTTGAGTTTGAGAGCTCTGGAACCGTTGAT
TACGTGATGATTGACAGCATCCCATCACTGAAGGCGCTGACGTGTGCCTT
CTGGATGCGCAGCACGGACAAGCAGAACTACGGGACCCCGCTGTCTTACG
CAACAAGCCTAGAGGACAACACATTTGTGCTGACAGACTATAATGGTTTT
GTGCTGTACATCGGTGGGAACAGCAAGGTGACAGACGTGACAGCAAACGA
CGGTCGCTGGCATCACATCTGTGTCACGTGGACCTCAGAGGGAGGGGTGT
GGAGGATCTACAAAAATGGCTACCCGGTGGACGAGGGACAGGGACTGGGA
ACGGACAGTGTTATACCAGGAGGAGGTGCTTTTGTCTTGGGACAAGAACA
GGACTCGCTAGGAGGAGACTTCAACGCCCCCCAGTCGTTCATCGGTCAGA
TGAGCCTCCTACAACTGTGGGACTACGTCCTGTCAGAGGATGACGTCTTC
ACCATGGCAACCACCTGTCAGAAGAATGTGGGAAATTTGGATATCGATGA
GTGTTCCAGTCAACCCTGTTTCAACAACGGAACCTGTGTTGATGCTGTCA
ACTCCTTTAGCTGCCAATGCCCGGTGGGATACACCTCTGATCTGTGTGAG
ATCGACATTGATGAGTGTGAGTCTGATCCCTGTCAGAACGGTGCCACCTG
CCTGGACCAGGTGGGCAGCTACACCTGTGTGTGCGCACCTGCCTTCTCAG
GCGCCAACTGTGAGACAGAGGTGCCCTCGGATTTCAACCTTGAGTTTGAG
AGCTCTGGAACCGTTGATTACGTGATGATTGACAGCATCCCATCACTGAA
GGCGCTGACGTGTGCCTTCTGGATGCGCAGCACGGACAAGCAGAACTACG
GGACCCCGCTGTCTTACGCAACAAGCCTAGAGGACAACACATTTGTGCTG
ACAGACTATAATGGTTTTGTGCTGTACATCGGTGGGAACAGCAAGGTGAC
AGACGTGACAGCAAACGACGGTCGCTGGCATCACATCTGTGTCACGTGGA
CCTCAGAGGGAGGGGTGTGGAGGATCTACAAAAATGGCTACCCGGTGGAC
GAGGGACAGGGACTGGGAACGGACAGTGTTATACCAGGAGGAGGTGCTTT
TGTCTTGGGACAAGAACAGGACTCGCTAGGAGGAGACTTCAACGCCCCCC
AGTCGTTCATCGGTCAGATGAGCCTCCTACAACTGTGGGACTACGTCCTG
TCAGAGGATGACGTCTTCACCATGGCAACCACCTGTCAGAAGAATGTGGG
AAATTTGGATATCGATGAGTGTTCCAGTCAACCCTGTTTCAACAACGGAA
CCTGTGTTGATGCTGTCAACTCCTTTAGCTGCCAATGCCCGGTGGGATAC
ACCTCTGATCTGTGTGAGATCGACATTGATGAGTGTGAGTCTGATCCCTG
TCAGAACGGTGCCACCTGCCTGGACCAGGTGGGCAGCTACACCTGTGTGT
GCGCACCTGCCTTCTCAGGCGCCAACTGTGAGACAGAGGTGCCCTCGGAT
TTCAACCTTGAGTTTGAGAGCTCTGGAACCGTTGATTACGTGATGATTGA
CAGCATCCCATCACTGAAGGCGCTGACGTGTGCCTTCTGGATGCGCAGCA
CGGACAAGCAGAACTACGGGACCCCGCTGTCTTACGCAACAAGCCTAGAG
GACAACACATTTGTGCTGACAGACTATAATGGTTTTGTGCTGTACATCGG
TGGGAACAGCAAGGTGACAGACGTGACAGCAAACGACGGTCGCTGGCATC
ACATCTGTGTCACGTGGACCTCAGAGGGAGGGGTGTGGAGGATCTACAAA
AATGGCTACCCGGTGGACGAGGGACAGGGACTGGGAACGGACAGTGTTAT
ACCAGGAGGAGGTGCTTTTGTCTTGGGACAAGAACAGGACTCGCTAGGAG
GAGACTTCAACGCCCCCCAGTCGTTCATCGGTCAGATGAGCCTCCTACAA
CTGTGGGACTACGTCCTGTCAGAGGATGACGTCTTCACCATGGCAACCAC
CTGTCAGAAGAATGTGGGAAATTTGGATATCGATGAGTGTTCCAGTCAAC
CCTGTTTCAACAACGGAACCTGTGTTGATGCTGTCAACTCCTTTAGCTGC
CAATGCCCGGTGGGATACACCTCTGATCTGTGTGAGATCGACATTGATGA
GTGTGAGTCTGATCCCTGTCAGAACGGTGCCACCTGCCTGGACCAGGTGG
GCAGCTACACCTGTGTGTGCGCACCTGCCTTCTCAGGCGCCAACTGTGAG
ACAGAGGTGCCCTCGGATTTCAACCTTGAGTTTGAGAGCTCTGGAACCGT
TGATTACGTGATGATTGACAGCATCCCATCACTGAAGGCGCTGACGTGTG
CCTTCTGGATGCGCAGCACGGACAAGCAGAACTACGGGACCCCGCTGTCT
TACGCAACAAGCCTAGAGGACAACACATTTGTGCTGACAGACTATAATGG
TTTTGTGCTGTACATCGGTGGGAACAGCAAGGTGACAGACGTGACAGCAA
ACGACGGTCGCTGGCATCACATCTGTGTCACGTGGACCTCAGAGGGAGGG
GTGTGGAGGATCTACAAAAATGGCTACCCGGTGGACGAGGGACAGGGACT
GGGAACGGACAGTGTTATACCAGGAGGAGGTGCTTTTGTCTTGGGACAAG
AACAGGACTCGCTAGGAGGAGACTTCAACGCCCCCCAGTCGTTCATCGGT
CAGATGAGCCTCCTACAACTGTGGGACTACGTCCTGTCAGAGGATGACGT
CTTCACCATGGCAACCACCTGTCAGAAGAATGTGGGAAAT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000001 | genome | Sc0000001:7090445..7092864 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97092_cuf7 |
| Biotype | protein_coding |
|
