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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97089_cuf24 >transcript:BL97089_cuf24-protein ID=transcript:BL97089_cuf24-protein|Name=transcript:BL97089_cuf24|organism=Branchiostoma lanceolatum|type=polypeptide|length=191bp
LCQTCISMLQVPQMKTISANGVVGFEQDRKAELTLTLQGIKAEDIVFATS MEKTLKDDKKSYSMDMQMKYPEIIDASLEAEMLGKDKVWTHVLKAEYSLF DQKKETIELNQRLRDLRTEDLMKFVATHDFKFSCFPDFHHKLSVNHENHE KMAKSSIQFDYGKDAFRDNNLKRLSLSSLITDGSDRSKYMY Run BLAST on NCBI mRNA from alignment at Sc0000001:1126843..1129226- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97089_cuf24 ID=transcript:BL97089_cuf24|Name=transcript:BL97089_cuf24|organism=Branchiostoma lanceolatum|type=mRNA|length=2384bp|location=Sequence derived from alignment at Sc0000001:1126843..1129226- (Branchiostoma lanceolatum) GCTGTGCCAAACATGCATCTCCATGCTCCAGGTGCCCCAGATGAAGACAA
TCTCCGCTAACGGCGTGGTCGGGTTCGAGCAGGACAGGAAGGCCGAGCTG
ACCCTGACCCTGCAGGGCATCAAGGCCGAGGACATCGTCTTCGCCACCTC
CATGGAGAAGACCCTGAAGGACGACAAGAAGTCTTACTCTATGGACATGC
AGGTGAGACCCTTATCTGTAGTCTTACGTCTTGCATCTTTAAGTAACTGA
CGGTATCGCCTTAGGAACCAATCTTGTGAAGCTAGACGTTTTGTAAACAG
GTGCTCTTTTTGGGCATGCATCTATCATAGCATAAGCTCTTAGTATCTTT
TGGTAGATTGACGATTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTC
CTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTTG
TCCTCCCTTTAGTTATAGCTGTTCATCCCTAGTGTGAGGAACATTTGTTT
TCATTCGCACCTACAAGGCTTCCTTCCTTCCTCTTTCCTTACGCTGTGAC
TAGTAATCTCGTATCAATGACTGACATTTGTTTCCTCCCCAACCTCCAGA
TGAAGTACCCCGAGATCATCGACGCCTCCCTGGAGGCTGAGATGCTGGGT
AAGGACAAGGTGTGGACCCACGTGCTGAAGGCCGAGTACTCTCTCTTCGA
CCAGAAGAAGGAGACCATCGAGCTCAACCAGAGGTGGGTCACGTCTTGAT
TATCACCTCTTAACCTTCTCCCTGCTGCTAAACCCTGTAACCAACTGGTG
CCCAAAGGCTACTTCAGCAGGGAGAAGGTTAATAGTCTCCATCATTCTCG
CTGGTTGCTGACAAAATAGCACAGATTATGGGTGAGTACGTTTTGATAAC
GCGTTTCCTTCTACATTTTAACCTTCTGCCCGCTGCCTAACCCTGTAATC
AGTACAAGTCTGGTGCCAAACGGCTGCTTCAGCTGGGAGGAGGTTAATAA
TAGTCTCCACCATTCTCGCTGGTTAAGGAAAAAATAGTACCTATAGGTAA
AATGAGTTGAACGATTGACTAGAGGGTGTATCCGGCCACAGAGTTACAGA
TTTTCCGACGGTGAAGACTATTTTAAAAGAGCTCGAGTTTACGGAGTGCA
AGCCCAATGGACCACGTCTGTGCCCTCTTACACTCACTAGAACGGCATCT
CTACTATCTAGGTCAGAAACATCATCCTTGAGACATTTGTGTAATCTGCG
TTGAAATCGGTTTGGGCTGAAGACACATAGAAATAGCAGTGTTATTTCTT
TTGTATTTTCAGGCTGCGTGACCTCCGCACTGAGGACCTCATGAAGTTCG
TCGCTACTCACGACTTCAAGTTCTCTTGCTTCCCTGACTTCCATCACAAG
GTACGGTTTCGATACTTGATCATCCTTTAACGTTTGCAGCTCATTGTCGT
AGCTTGGTTGTACCGTGCACATCCTCCAAACTCTCTTTGTTGTAAGCATT
GAGTTCGACATAACTACCCAATATTCTATCTAATGTATTGAAGTGTGGTC
CTAACGAAAAATAATGCCTGTACATTGAATCACTCGTGTGAATTGACATA
ATGTGCTCACTTGCGGTGGTGACTGATAAAGTGTCAGGAAAGTGAGTCCC
GCTCTATACACCACTCTCTTTATCACTCATTATTTATGTGAGTGGGCCCA
GTAGGCTCCCTTGCGGTACACTGAACAGAGTAAGCCTTAGTGATGACGGT
CCGCTGTTCGTTATAAATCTCGTGTGTTCTCGCGCAGCTTTCCGTCAACC
ACGAGAACCACGAGAAGATGGCCAAGTCCAGCATCCAGTTCGACTACGGC
AAGGACGCCTTCCGCGACAACAACCTGAAGCGCCTCAGCCTCTCCAGCCT
CATCACTGACGGATCCGACAGGTAACTTTTACTATTCTATTCTATTGTGT
TGTGTTGTATTCTATTCTCTATTCTGTTCAGTTCTAGCCTAGCCTAGCCT
AGCCTAGCCTAGCCTAGCCTAGCCTAGCCCAGCCCAGCCCAGCCCAGCCC
AACCCAACCCAGCTTAGTCTAGTCTAGTCTAAGCACATTTGGGCATACAG
TTAGACGAAGGGCGGACAGAGGTGAACTACATGACATGACGTTGAGAATC
TGACATTGACAGAGAGAGTTAACTTTGTTCTAATGTACATGTACCTAACT
CTCCTGCAGGCCCAAGTACATGTACGATGTGAATCAGACATTGATAGTCT
TCGTCCTGATATAGATGATTAAACATGTATAACTCTCCTCCAAGTACGTT
AAGAATCTTACATTGACAAAAAAAGTTAACTTGGTTCTAATGTACATGTA
CCCAACTCTCCCCCAGGTCCAAGTACATGTACGA Coding sequence (CDS) from alignment at Sc0000001:1126843..1129226- >transcript:BL97089_cuf24 ID=transcript:BL97089_cuf24|Name=transcript:BL97089_cuf24|organism=Branchiostoma lanceolatum|type=CDS|length=2865bp|location=Sequence derived from alignment at Sc0000001:1126843..1129226- (Branchiostoma lanceolatum) CTGTGCCAAACATGCATCTCCATGCTCCAGGTGCCCCAGATGAAGACAAT CTCCGCTAACGGCGTGGTCGGGTTCGAGCAGGACAGGAAGGCCGAGCTGA CCCTGACCCTGCAGGGCATCAAGGCCGAGGACATCGTCTTCGCCACCTCC ATGGAGAAGACCCTGAAGGACGACAAGAAGTCTTACTCTATGGACATGCA GATGAAGTACCCCGAGATCATCGACGCCTCCCTGGAGGCTGAGATGCTGG GTAAGGACAAGGTGTGGACCCACGTGCTGAAGGCCGAGTACTCTCTCTTC GACCAGAAGAAGGAGACCATCGAGCTCAACCAGAGGCTGCGTGACCTCCG CACTGAGGACCTCATGAAGTTCGTCGCTACTCACGACTTCAAGTTCTCTT GCTTCCCTGACTTCCATCACAAGCTTTCCGTCAACCACGAGAACCACGAG AAGATGGCCAAGTCCAGCATCCAGTTCGACTACGGCAAGGACGCCTTCCG CGACAACAACCTGAAGCGCCTCAGCCTCTCCAGCCTCATCACTGACGGAT CCGACAGGTCCAAGTACATGTACCTGTGCCAAACATGCATCTCCATGCTC CAGGTGCCCCAGATGAAGACAATCTCCGCTAACGGCGTGGTCGGGTTCGA GCAGGACAGGAAGGCCGAGCTGACCCTGACCCTGCAGGGCATCAAGGCCG AGGACATCGTCTTCGCCACCTCCATGGAGAAGACCCTGAAGGACGACAAG AAGTCTTACTCTATGGACATGCAGATGAAGTACCCCGAGATCATCGACGC CTCCCTGGAGGCTGAGATGCTGGGTAAGGACAAGGTGTGGACCCACGTGC TGAAGGCCGAGTACTCTCTCTTCGACCAGAAGAAGGAGACCATCGAGCTC AACCAGAGGCTGCGTGACCTCCGCACTGAGGACCTCATGAAGTTCGTCGC TACTCACGACTTCAAGTTCTCTTGCTTCCCTGACTTCCATCACAAGCTTT CCGTCAACCACGAGAACCACGAGAAGATGGCCAAGTCCAGCATCCAGTTC GACTACGGCAAGGACGCCTTCCGCGACAACAACCTGAAGCGCCTCAGCCT CTCCAGCCTCATCACTGACGGATCCGACAGGTCCAAGTACATGTACCTGT GCCAAACATGCATCTCCATGCTCCAGGTGCCCCAGATGAAGACAATCTCC GCTAACGGCGTGGTCGGGTTCGAGCAGGACAGGAAGGCCGAGCTGACCCT GACCCTGCAGGGCATCAAGGCCGAGGACATCGTCTTCGCCACCTCCATGG AGAAGACCCTGAAGGACGACAAGAAGTCTTACTCTATGGACATGCAGATG AAGTACCCCGAGATCATCGACGCCTCCCTGGAGGCTGAGATGCTGGGTAA GGACAAGGTGTGGACCCACGTGCTGAAGGCCGAGTACTCTCTCTTCGACC AGAAGAAGGAGACCATCGAGCTCAACCAGAGGCTGCGTGACCTCCGCACT GAGGACCTCATGAAGTTCGTCGCTACTCACGACTTCAAGTTCTCTTGCTT CCCTGACTTCCATCACAAGCTTTCCGTCAACCACGAGAACCACGAGAAGA TGGCCAAGTCCAGCATCCAGTTCGACTACGGCAAGGACGCCTTCCGCGAC AACAACCTGAAGCGCCTCAGCCTCTCCAGCCTCATCACTGACGGATCCGA CAGGTCCAAGTACATGTACCTGTGCCAAACATGCATCTCCATGCTCCAGG TGCCCCAGATGAAGACAATCTCCGCTAACGGCGTGGTCGGGTTCGAGCAG GACAGGAAGGCCGAGCTGACCCTGACCCTGCAGGGCATCAAGGCCGAGGA CATCGTCTTCGCCACCTCCATGGAGAAGACCCTGAAGGACGACAAGAAGT CTTACTCTATGGACATGCAGATGAAGTACCCCGAGATCATCGACGCCTCC CTGGAGGCTGAGATGCTGGGTAAGGACAAGGTGTGGACCCACGTGCTGAA GGCCGAGTACTCTCTCTTCGACCAGAAGAAGGAGACCATCGAGCTCAACC AGAGGCTGCGTGACCTCCGCACTGAGGACCTCATGAAGTTCGTCGCTACT CACGACTTCAAGTTCTCTTGCTTCCCTGACTTCCATCACAAGCTTTCCGT CAACCACGAGAACCACGAGAAGATGGCCAAGTCCAGCATCCAGTTCGACT ACGGCAAGGACGCCTTCCGCGACAACAACCTGAAGCGCCTCAGCCTCTCC AGCCTCATCACTGACGGATCCGACAGGTCCAAGTACATGTACCTGTGCCA AACATGCATCTCCATGCTCCAGGTGCCCCAGATGAAGACAATCTCCGCTA ACGGCGTGGTCGGGTTCGAGCAGGACAGGAAGGCCGAGCTGACCCTGACC CTGCAGGGCATCAAGGCCGAGGACATCGTCTTCGCCACCTCCATGGAGAA GACCCTGAAGGACGACAAGAAGTCTTACTCTATGGACATGCAGATGAAGT ACCCCGAGATCATCGACGCCTCCCTGGAGGCTGAGATGCTGGGTAAGGAC AAGGTGTGGACCCACGTGCTGAAGGCCGAGTACTCTCTCTTCGACCAGAA GAAGGAGACCATCGAGCTCAACCAGAGGCTGCGTGACCTCCGCACTGAGG ACCTCATGAAGTTCGTCGCTACTCACGACTTCAAGTTCTCTTGCTTCCCT GACTTCCATCACAAGCTTTCCGTCAACCACGAGAACCACGAGAAGATGGC CAAGTCCAGCATCCAGTTCGACTACGGCAAGGACGCCTTCCGCGACAACA ACCTGAAGCGCCTCAGCCTCTCCAGCCTCATCACTGACGGATCCGACAGG TCCAAGTACATGTAC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000001 | genome | Sc0000001:1126843..1129226 - |
Properties
Property Name | Value |
Transcript id | BL97089_cuf24 |
Biotype | protein_coding |
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