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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97088_cuf10 >transcript:BL97088_cuf10-protein ID=transcript:BL97088_cuf10-protein|Name=transcript:BL97088_cuf10|organism=Branchiostoma lanceolatum|type=polypeptide|length=365bp
VNLAPYRAALGVSSVDDEGDSKVATSPKLRQQETPKSPAKAYIDYAQLSK
SRERLSDSSSSREQLTDSSERLTESPKPYHHREQPSPRDGGGQASGSEKA
YIDMSQLRGPRKLYLQRSQTEEIHARYPGAESASEEHTPTIQVSSSESIV
RRRLRSFEGDSRGEQQGPAPFARAGIQGEGAEQRSCRQRGRARAATDSAL
FIHEGDSDFEEDRLLARDFARHAERLSLQTPVPESLSVDEGIDVRALSPQ
DLSVDVDLSTKFHDIDRLVSETIKDTLLASTSPYKGGAKASRSKDSLDSG
AVLSPSMSRDVMAMGGSQPSPEGYGSRDEGWSDIDQWILERWNSIDHLME
TWTLTDNPSADVSEC Run BLAST on NCBI mRNA from alignment at Sc0000001:8378405..8381736+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97088_cuf10 ID=transcript:BL97088_cuf10|Name=transcript:BL97088_cuf10|organism=Branchiostoma lanceolatum|type=mRNA|length=3332bp|location=Sequence derived from alignment at Sc0000001:8378405..8381736+ (Branchiostoma lanceolatum)
TGTCAATCTCGCACCCTACCGAGCGGCTCTTGGCGTATCCTCTGTCGACG
ATGAAGGTGACTCCAAGGTCGCCACCAGTCCCAAGTTAAGACAACAGGAG
ACGCCAAAATCACCTGCCAAAGCTTACATCGACTACGCTCAACTCTCAAA
ATCGAGAGAGCGCTTGTCGGACTCGTCTAGCTCCAGAGAACAGCTGACAG
ATTCCAGCGAGCGCTTGACAGAATCTCCCAAGCCGTACCATCACCGCGAA
CAGCCTTCTCCGAGGGACGGAGGCGGCCAGGCGAGCGGATCCGAGAAAGC
GTACATCGACATGAGCCAGCTGAGAGGACCCAGAAAACTGTACCTGCAAC
GGAGCCAGACTGAGGAGATACACGCAAGGTGGGCACTTTTGCAATGATGC
AACTCTTGTCACTTTAGATTTTTGGAAAGACACTGGGAATTTTGAAAATC
TAATTAACTTATATTCAACTTCTTCATGATATGAATGTACAGTAAAGTTT
CATGTCAACATAAGAGAGGATTCTTATAATCATGGAGATTATATTAGATA
CTTGAAATCTAGATAAATAGAAAGTGTTTTATCAAATTTCGAGGGTGCAG
TGCTATTTTAGCATCTTGCAAATTGAAAGAAAGTGTTTCTAAATATCAGT
TGTTGGATGGTAATGGTAACGATGAGTACTTCTTCCACTACAGATACCCA
GGAGCTGAGTCAGCTTCAGAGGAGCACACGCCAACAATACAGGTTTCCAG
TTCAGAAAGCATCGTGAGACGGAGACTGCGGTCATTTGAAGGGGATTCCA
GAGGTGAACAGCAGGGGCCTGCTCCGTTCGCCAGGGCGGGTATCCAGGGT
GAGGGGGCAGAGCAGAGGAGCTGTCGACAACGGGGCAGAGCACGCGCTGC
GACCGACAGCGCCCTGTTTATTCACGAGGGAGATAGTGACTTTGAGGAGG
ACAGGCTGCTAGCACGTGACTTTGCCCGCCACGCAGAGCGCTTGTCTTTG
CAGACTCCAGTTCCTGAGAGTCTGTCTGTAGACGAAGGAATTGATGTCCG
CGCGTTGAGTCCTCAAGATCTAAGTGTTGACGTAGATCTAAGTACAAAAT
TCCACGATATAGACAGACTTGTGTCGGAGACGATTAAGGACACTCTCCTG
GCATCCACTTCTCCTTATAAGGGTGGCGCGAAGGCTTCTCGTTCGAAGGA
CAGTTTGGACAGCGGCGCCGTTCTGTCCCCGTCCATGAGTCGGGACGTCA
TGGCTATGGGCGGGTCCCAGCCCTCGCCGGAAGGTTACGGATCCCGGGAC
GAGGGCTGGTCGGACATCGACCAGTGGATCCTGGAGCGGTGGAACAGCAT
TGACCACCTCATGGAGACCTGGACCCTGACAGACAATCCCAGCGCTGACG
TCTCCGAGTGTTGATGTCCGACTCTCACAGATCAGTCGTTATAATCCAGA
TTAGACATAGCAAAACTAAGAGATCATGTCGTAGTAACATTCATCATTTG
ATGTGGTGTAAAAGGTAACTCTTGTGATTGTTGCATGTTACAAACATGCC
ATAGACACAAGTTCAAAACATTACAGAACACTATCCACCAAGATGTGAAC
GTCTACTCTTCAACAGATGTTATCTATTTCATGTTACTCTCAGAACCAAA
CATACAATCACTTCTGGATCAGAAGAACTAAAAGTGATATTGACACAAAA
TCCTGACAACTTTAGTTGAGACCTGTAACCAGTACTAGTAGGTTGTAGCA
TGCAGACATGTAAAAGTAACTTCATAGACAAGGTCCAGTATTAGATGAAA
GTAACCACTGCCAACTTAGATGTGAAAAATTTCAGTAGGGGGAGGGGGGC
TGTGCTGTCATTGCCATGAATTGTAATGCAAAAAGTACTATTCCTGAGTC
GTGTTAGTTTTTTTTCTCTGTGATGGGAACAAATTATTTGTGCCATCCAT
TCAATGTGAAACTTTGTCAATGTTATTTTTTGTGAGTTACACCTGTAAGA
TACTGGAGAAGCTGGTGTGACAATGATAATCAGGTCCGAACTTTTCAAGG
AACTTCTCTTTTTGTGTCAATGATAATAGGTTAACCCTTTTTGGCTAACT
TGTGCTGTAAGTGGTACACTTCTCATTCCTAGATGAACCCATGACAAGGA
GAAGGTTAATATGCTTCTGTAAGTTAATATGGAAAAGAGATAATTTTTTT
TTCAATTGTTAAGTGTGGTACTAGCGAGACTAACAAGTGTCTGATCTGGC
TGTGTTTATGTCTGGTGCTAAGACCCAAGAAGTAATACAGCAGAAAGTCT
GCTTTTGTTCTAGTTCAGAGGAAGTTTGGTTGACATTGTTGGACAGTGTC
CCGTTGCCATGACAATATGATAAAGGCCGTGGAATTTCATCCACAGATTC
AGGAGAATCGCGAANTTCATCCACAGATTCAGGAGAGTCGCGAAAGGGAG
AATTTTGTATGAGCTGAGGGAGAATTATGACTGGAAATTTTGTAATAGTT
CTATATGTACTGGAATGTAATGAATCAGGATTTACTGAAAAGGAATTATG
GACAATAGAGGTCTTTTTTAAAAATATGAATATTATTGTCATGATTCAAG
CAGTGTTATGACACTAGTGTGCAGAAACAACTACACTGTTTTGATGTTCT
GTGTATTACATATAGCTACCCCAGCAAGACTTATACCTGTACTTCAGTCG
GAAGATTACAAGACAATTGTTGTCGTTGACTTGTTTCTATTAACCCAGAA
ATGTTATTTGTTCCCCTCTCGTTTGCAGGGAAGCATGTACGTGTATATCT
CAATTCGATCGTGCCATATTTGTATTTATAACATCCTTTTTTAACTGGTC
TTTCAAGTCACATTGTAACAAGTGCACACCAAATATGTTTATCGTCCTTA
TTTATTTTTTGAAGAGTGGCACTTAATTCATATTTTGTACTAATGTCTGT
GTCAAATTGCCAAATTTTTTTCTTCTACTCATTTATAGAATGGAATAAGC
TCCTTTGTTAGTGAGAACCAAAATGTCTCCTGTATGGTAAGAGTGGTAAG
AATATTTGACATGTATATTTATTCTAGTAAAGGGGAGGTAATGTGTAGTC
GTTAGCTCCAAATGTAATCATGTACAATCCTTAAAACAATGGATGTGTAA
TTAATCAAAGAATCATGTTTATTTATTCCTATTATTATCTTTATTATTCT
AATGAGAAAAAAGTTGACTTATTCTGTGTCATGGTGTACATTAGACTGTA
TTTAAAATAAAGCCATTCTAAAGCAGTTCATCTTTTGTGTCTAATGCTTG
AAAATGTGTTACTTAACAGTCTCAAGAATCTA Coding sequence (CDS) from alignment at Sc0000001:8378405..8381736+ >transcript:BL97088_cuf10 ID=transcript:BL97088_cuf10|Name=transcript:BL97088_cuf10|organism=Branchiostoma lanceolatum|type=CDS|length=2196bp|location=Sequence derived from alignment at Sc0000001:8378405..8381736+ (Branchiostoma lanceolatum)
GTCAATCTCGCACCCTACCGAGCGGCTCTTGGCGTATCCTCTGTCGACGA
TGAAGGTGACTCCAAGGTCGCCACCAGTCCCAAGTTAAGACAACAGGAGA
CGCCAAAATCACCTGCCAAAGCTTACATCGACTACGCTCAACTCTCAAAA
TCGAGAGAGCGCTTGTCGGACTCGTCTAGCTCCAGAGAACAGCTGACAGA
TTCCAGCGAGCGCTTGACAGAATCTCCCAAGCCGTACCATCACCGCGAAC
AGCCTTCTCCGAGGGACGGAGGCGGCCAGGCGAGCGGATCCGAGAAAGCG
TACATCGACATGAGCCAGCTGAGAGGACCCAGAAAACTGTACCTGCAACG
GAGCCAGACTGAGGAGATACACGCAAGATACCCAGGAGCTGAGTCAGCTT
CAGAGGAGCACACGCCAACAATACAGGTTTCCAGTTCAGAAAGCATCGTG
AGACGGAGACTGCGGTCATTTGAAGGGGATTCCAGAGGTGAACAGCAGGG
GCCTGCTCCGTTCGCCAGGGCGGGTATCCAGGGTGAGGGGGCAGAGCAGA
GGAGCTGTCGACAACGGGGCAGAGCACGCGCTGCGACCGACAGCGCCCTG
TTTATTCACGAGGGAGATAGTGACTTTGAGGAGGACAGGCTGCTAGCACG
TGACTTTGCCCGCCACGCAGAGCGCTTGTCTTTGCAGACTCCAGTTCCTG
AGAGTCTGTCTGTAGACGAAGGAATTGATGTCCGCGCGTTGAGTCCTCAA
GATCTAAGTGTTGACGTAGATCTAAGTACAAAATTCCACGATATAGACAG
ACTTGTGTCGGAGACGATTAAGGACACTCTCCTGGCATCCACTTCTCCTT
ATAAGGGTGGCGCGAAGGCTTCTCGTTCGAAGGACAGTTTGGACAGCGGC
GCCGTTCTGTCCCCGTCCATGAGTCGGGACGTCATGGCTATGGGCGGGTC
CCAGCCCTCGCCGGAAGGTTACGGATCCCGGGACGAGGGCTGGTCGGACA
TCGACCAGTGGATCCTGGAGCGGTGGAACAGCATTGACCACCTCATGGAG
ACCTGGACCCTGACAGACAATCCCAGCGCTGACGTCTCCGAGTGTTGAGT
CAATCTCGCACCCTACCGAGCGGCTCTTGGCGTATCCTCTGTCGACGATG
AAGGTGACTCCAAGGTCGCCACCAGTCCCAAGTTAAGACAACAGGAGACG
CCAAAATCACCTGCCAAAGCTTACATCGACTACGCTCAACTCTCAAAATC
GAGAGAGCGCTTGTCGGACTCGTCTAGCTCCAGAGAACAGCTGACAGATT
CCAGCGAGCGCTTGACAGAATCTCCCAAGCCGTACCATCACCGCGAACAG
CCTTCTCCGAGGGACGGAGGCGGCCAGGCGAGCGGATCCGAGAAAGCGTA
CATCGACATGAGCCAGCTGAGAGGACCCAGAAAACTGTACCTGCAACGGA
GCCAGACTGAGGAGATACACGCAAGATACCCAGGAGCTGAGTCAGCTTCA
GAGGAGCACACGCCAACAATACAGGTTTCCAGTTCAGAAAGCATCGTGAG
ACGGAGACTGCGGTCATTTGAAGGGGATTCCAGAGGTGAACAGCAGGGGC
CTGCTCCGTTCGCCAGGGCGGGTATCCAGGGTGAGGGGGCAGAGCAGAGG
AGCTGTCGACAACGGGGCAGAGCACGCGCTGCGACCGACAGCGCCCTGTT
TATTCACGAGGGAGATAGTGACTTTGAGGAGGACAGGCTGCTAGCACGTG
ACTTTGCCCGCCACGCAGAGCGCTTGTCTTTGCAGACTCCAGTTCCTGAG
AGTCTGTCTGTAGACGAAGGAATTGATGTCCGCGCGTTGAGTCCTCAAGA
TCTAAGTGTTGACGTAGATCTAAGTACAAAATTCCACGATATAGACAGAC
TTGTGTCGGAGACGATTAAGGACACTCTCCTGGCATCCACTTCTCCTTAT
AAGGGTGGCGCGAAGGCTTCTCGTTCGAAGGACAGTTTGGACAGCGGCGC
CGTTCTGTCCCCGTCCATGAGTCGGGACGTCATGGCTATGGGCGGGTCCC
AGCCCTCGCCGGAAGGTTACGGATCCCGGGACGAGGGCTGGTCGGACATC
GACCAGTGGATCCTGGAGCGGTGGAACAGCATTGACCACCTCATGGAGAC
CTGGACCCTGACAGACAATCCCAGCGCTGACGTCTCCGAGTGTTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000001 | genome | Sc0000001:8378405..8381736 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97088_cuf10 |
| Biotype | protein_coding |
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