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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97086_cuf11 >transcript:BL97086_cuf11-protein ID=transcript:BL97086_cuf11-protein|Name=transcript:BL97086_cuf11|organism=Branchiostoma lanceolatum|type=polypeptide|length=170bp
DDVENKPTKSTYCKEVGDNENTDAEIEEVEFELADWHSARGSVSGDDWQN
RKNVKTKDGTCCSCCCRCCGHPSRRCSHLAWVLAFATCSGAAFFAIYYGI
NFGKQEALSWLVYVGVAFLQDLLILQFIKVIVFAVFVSLCCKMYEEESWE
PVLPERLAAVDSWTTATSAL Run BLAST on NCBI mRNA from alignment at Sc0000001:9630994..9632676+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97086_cuf11 ID=transcript:BL97086_cuf11|Name=transcript:BL97086_cuf11|organism=Branchiostoma lanceolatum|type=mRNA|length=1683bp|location=Sequence derived from alignment at Sc0000001:9630994..9632676+ (Branchiostoma lanceolatum)
TGATGATGTAGAAAATAAACCAACTAAGTCAACCTACTGCAAGGAAGTGG
GCGACAATGAGAACACAGATGCTGAAATAGAAGAGGTTGAATTTGAACTT
GCAGATTGGCATTCTGCAAGAGGTAGTGTTAGCGGTGACGACTGGCAAAA
CAGGAAAAATGTAAAAACGAAGGATGGGACTTGCTGCAGCTGCTGTTGCA
GGTGAGTCGCCATAAAGTGGCGTTTCAAATATGATGTACGTAAAGTAGCT
ATTATTAGCCTGGTAACCACACCATCGGGAGCTCCCCGGTATCTCTGCGG
CGCTTGGCTTAATTACTTCGCTCTGGGGCTAGGTAATAACTCGACATGCC
AGCTAAGATGACAGGCTGACAGAAACAGACCAATGCATAGCAGACTGGGC
CCGGTAAAACATCCCTAAGCTGACCCGTAGAGACTGGTGACCAGGTCATG
TTGCTATTGGTTCGATGTGATATTTTGTGCTTCTCCGTCTGTCCGCAAAA
GAATGTATTGTTCATCAACAGGACAGCATTCCGTCCAGTTCCCTCCCTGT
CCGAACAGAAGCTTGATTTTTCCTCATTGTTTTATCTGTTCAAACATCGG
TAGATGCTGTGGACATCCTTCACGGAGATGTTCTCATCTGGCATGGGTCC
TAGCGTTTGCCACCTGCAGTGGAGCGGCATTCTTTGCCATTTATTATGGA
ATCAACTTCGGAAAACAAGAGGCTCTCAGCTGGCTGGTGTACGTAGGAGT
CGCCTTTTTACAGGTCAGTTATGATTGGAACTGATAAACACGAAAGGTGA
AATCTTGCAACTAACGACCAGCCATAGCCATCACAGCAGCAGTATCACCT
ACTATCAAGCTGTCTTCTGAAGTTCTGAATATACAATTCTTATACCATTC
GGTATCAAAATAAACTTTTACATCAAAGTTATCCTTACGACGTTCCCTAT
AATTTTGTACCGGTATACCATCTATGTTATTCTCATGTTCCTTATGTATA
ATAACATCACTGAAATGGTCAGCCGTCAACTTTTTGCTGTGGGTTGACGT
AGAATTCATCGAATAAACCCCTTCTTTTGCCCTCTTTGGATATCGTTAGG
ACCTTCTGATCCTGCAGTTCATCAAGGTCATCGTCTTTGCTGTCTTTGTC
TCACTGTGTTGCAAAATGTACGAAGAAGAAAGCTGGGAACCAGTCTTACC
CGAACGTCTTGCAGGTAAGAGAAATTGGCAGACATTGTTTTTCATTGAAA
TTTGTTAATCCTTTAAAAATGCTAGCGCTGTGAGATCGAATGAAAATTTT
ATTAGTTGATTTCTCTGCGTTACAAATCTAAGTGTCCTTACATGTCAAAC
ACATATTTACCGTTATGTTAACATTATTCTTAATGTCCCAGCTGTGGATT
CATGGACAACGGCGACATCAGCTCTCTAACCAGGCGAAGATCACACACAT
GCAGGCGTGCAACAAAACCCCTGGTCTCAGCCAGTGCCACCATCGCAGAT
GAACTAGTACCACATATTGTGGTGCACATTTTGCTACAGATACACTATGT
ATACCTGTGTACTGTCATGTTCTATTCTCCTGGACAGATTCTAGATCTAG
AATTCAATGTGATTAACTTAACTTTAATGTTTCTCAACAGCTTGCTTATG
ATGTTCTAGCAACTGTGAAGTTAAGAAGACTTT Coding sequence (CDS) from alignment at Sc0000001:9630994..9632676+ >transcript:BL97086_cuf11 ID=transcript:BL97086_cuf11|Name=transcript:BL97086_cuf11|organism=Branchiostoma lanceolatum|type=CDS|length=2052bp|location=Sequence derived from alignment at Sc0000001:9630994..9632676+ (Branchiostoma lanceolatum)
GATGATGTAGAAAATAAACCAACTAAGTCAACCTACTGCAAGGAAGTGGG
CGACAATGAGAACACAGATGCTGAAATAGAAGAGGTTGAATTTGAACTTG
CAGATTGGCATTCTGCAAGAGGTAGTGTTAGCGGTGACGACTGGCAAAAC
AGGAAAAATGTAAAAACGAAGGATGGGACTTGCTGCAGCTGCTGTTGCAG
ATGCTGTGGACATCCTTCACGGAGATGTTCTCATCTGGCATGGGTCCTAG
CGTTTGCCACCTGCAGTGGAGCGGCATTCTTTGCCATTTATTATGGAATC
AACTTCGGAAAACAAGAGGCTCTCAGCTGGCTGGTGTACGTAGGAGTCGC
CTTTTTACAGGACCTTCTGATCCTGCAGTTCATCAAGGTCATCGTCTTTG
CTGTCTTTGTCTCACTGTGTTGCAAAATGTACGAAGAAGAAAGCTGGGAA
CCAGTCTTACCCGAACGTCTTGCAGCTGTGGATTCATGGACAACGGCGAC
ATCAGCTCTCTAAGATGATGTAGAAAATAAACCAACTAAGTCAACCTACT
GCAAGGAAGTGGGCGACAATGAGAACACAGATGCTGAAATAGAAGAGGTT
GAATTTGAACTTGCAGATTGGCATTCTGCAAGAGGTAGTGTTAGCGGTGA
CGACTGGCAAAACAGGAAAAATGTAAAAACGAAGGATGGGACTTGCTGCA
GCTGCTGTTGCAGATGCTGTGGACATCCTTCACGGAGATGTTCTCATCTG
GCATGGGTCCTAGCGTTTGCCACCTGCAGTGGAGCGGCATTCTTTGCCAT
TTATTATGGAATCAACTTCGGAAAACAAGAGGCTCTCAGCTGGCTGGTGT
ACGTAGGAGTCGCCTTTTTACAGGACCTTCTGATCCTGCAGTTCATCAAG
GTCATCGTCTTTGCTGTCTTTGTCTCACTGTGTTGCAAAATGTACGAAGA
AGAAAGCTGGGAACCAGTCTTACCCGAACGTCTTGCAGCTGTGGATTCAT
GGACAACGGCGACATCAGCTCTCTAAGATGATGTAGAAAATAAACCAACT
AAGTCAACCTACTGCAAGGAAGTGGGCGACAATGAGAACACAGATGCTGA
AATAGAAGAGGTTGAATTTGAACTTGCAGATTGGCATTCTGCAAGAGGTA
GTGTTAGCGGTGACGACTGGCAAAACAGGAAAAATGTAAAAACGAAGGAT
GGGACTTGCTGCAGCTGCTGTTGCAGATGCTGTGGACATCCTTCACGGAG
ATGTTCTCATCTGGCATGGGTCCTAGCGTTTGCCACCTGCAGTGGAGCGG
CATTCTTTGCCATTTATTATGGAATCAACTTCGGAAAACAAGAGGCTCTC
AGCTGGCTGGTGTACGTAGGAGTCGCCTTTTTACAGGACCTTCTGATCCT
GCAGTTCATCAAGGTCATCGTCTTTGCTGTCTTTGTCTCACTGTGTTGCA
AAATGTACGAAGAAGAAAGCTGGGAACCAGTCTTACCCGAACGTCTTGCA
GCTGTGGATTCATGGACAACGGCGACATCAGCTCTCTAAGATGATGTAGA
AAATAAACCAACTAAGTCAACCTACTGCAAGGAAGTGGGCGACAATGAGA
ACACAGATGCTGAAATAGAAGAGGTTGAATTTGAACTTGCAGATTGGCAT
TCTGCAAGAGGTAGTGTTAGCGGTGACGACTGGCAAAACAGGAAAAATGT
AAAAACGAAGGATGGGACTTGCTGCAGCTGCTGTTGCAGATGCTGTGGAC
ATCCTTCACGGAGATGTTCTCATCTGGCATGGGTCCTAGCGTTTGCCACC
TGCAGTGGAGCGGCATTCTTTGCCATTTATTATGGAATCAACTTCGGAAA
ACAAGAGGCTCTCAGCTGGCTGGTGTACGTAGGAGTCGCCTTTTTACAGG
ACCTTCTGATCCTGCAGTTCATCAAGGTCATCGTCTTTGCTGTCTTTGTC
TCACTGTGTTGCAAAATGTACGAAGAAGAAAGCTGGGAACCAGTCTTACC
CGAACGTCTTGCAGCTGTGGATTCATGGACAACGGCGACATCAGCTCTCT
AA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000001 | genome | Sc0000001:9630994..9632676 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97086_cuf11 |
| Biotype | protein_coding |
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