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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97054_cuf4 >transcript:BL97054_cuf4-protein ID=transcript:BL97054_cuf4-protein|Name=transcript:BL97054_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=337bp
GSESFVVTTTTVLLSIETEVDYEVAQEYTLILDVQDDGATPPRTGTVAIK ILIEDVNDNCPILEETMFNIHPQPVLRTTPVMSLLWEDRDSGDNANTTFH RTQINQTIIYDSRNDSTLLEFHIIVVDRGTPRRGDIATVAMTINDACLYD SLDQSITHEITVDDDTGGVFVRVPKYYVKEFECGAPLGMQSALIFFTQIT ASSAYEYYQPHYARLHNQPTNNDTTGVFAQGNWKAEIEDTNQWLQVSFLQ ETIVTGVILQGSANDAAWVETYYLTYLSNGNDTWKTYVEGGVRRVFTGNT DSSSTVQQDLADRITVTDIRIHPQTWHGSISMRMELI Run BLAST on NCBI mRNA from alignment at Sc0000022:2610379..2612966+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97054_cuf4 ID=transcript:BL97054_cuf4|Name=transcript:BL97054_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=2588bp|location=Sequence derived from alignment at Sc0000022:2610379..2612966+ (Branchiostoma lanceolatum) AGGTTCTGAATCTTTCGTCGTGACCACAACGACTGTACTGTTGAGCATTG
AGACTGAAGTGGATTACGAAGTGGCCCAGGAATACACCCTAATACTAGAT
GTACAGGACGACGGCGCCACACCACCAAGGACAGGAACAGTGGCAATCAA
GGTATGTGACCCTTATCAAGAGATTGTGGCGCATTTGCCAATCAGGAAAG
CGTTGGACAAGACAGAAGACCAAAGAAATGTCTGTCTTCTCAGAAAAAAA
GAAAGTCGGTTAAACTGTTGTTACATCAGCCACCATATCAAGCTTGCCAT
GAATAGTTTTATATGGTTGGTAAGTCGACGAAATATTTGAGACCGCATCT
GTAAGCAGCGACACCTATAGCGACAGTCTCTCAGTCTCTCACATTAGAGT
TTTCAAATATTTAGCTCACTGAAAACTGAAGATGAAAGATTTCTCGTCGT
CTTTCAAACACATTGCTCTTTTCACTCCCACATAGATCCTTATCGAGGAC
GTGAATGATAATTGTCCCATCCTAGAGGAGACGATGTTTAACATCCACCC
TCAGCCTGTCTTAAGAACGACTCCAGTGATGTCTCTCCTGTGGGAGGATA
GAGACAGTGGGGACAACGCCAACACGACATTCCACAGGACGCAGATCAAC
CAAACGTAAGACCGCGCAATTTTCGTTGATTATGGTTTCAAGTTGTGCTA
GCTTGGCAATGTATACATGTAGCTGTAAACTATCATTTTGCTGTGACCTG
TATTTCACCCTGTGGGTATATATGTTCAATAAAGGTCTTCATTCATTAAT
TTGTTCATTTTAGAATGCATAAAATTTGATTTGTTATCAACCCTAATTGC
TCTCTATAACAAAAGGATAAAGGCCTTGCTACTTTTGACAAAGGACAACA
GTATCTTGACCTCAACAAACTGGCTCAAAGGCACTTACAAAGACATAAAT
ATCATTCTTACGGTTTCAGTCCTTTGCTCTCAAACTTGTTTTTATGTTTT
TGGGAACTTTTTTCATGATAAACGTCGTCTACATATAAACAGTAGTGTCT
GTTCTGCCTTTCACGAGATTCTGAAGACAAATTCCGAAGAAAAAAAAAAC
TTTGTTTCTCAAGCTTTGTCACGTTGGAGAGCTCGAGCTTATTGGTGTTG
TTTCTTTCTTTGCAGAATCATCTACGACAGCAGAAACGACAGCACCCTGT
TAGAGTTCCACATCATCGTGGTCGACAGAGGGACACCACGACGTGGAGAC
ATAGCAACCGTTGCCATGACGATAAACGACGCATGTCTCTATGACAGTTT
GGACCAATCAATCACGCACGAGATAACTGTTGATGACGATACAGGAGGAG
TGTTCGTTCGAGTACCGAAGTATTACGTCAAAGAATTTGGTGAGATGAAT
TTTGTAACCTAAACAAATATGTTCCATTTTCTTAATTTAATTTGAATTCT
ATTTTGATTGGTATCTTTTGTACAGTTTGGGTTACTATAGAATTCTTTTT
TTTCTCGCAATTTGATATTTAGAATGTGGTGCACCACTGGGGATGCAGAG
TGCACTGATCTTCTTCACACAAATCACGGCGTCTTCCGCGTATGAATACT
ACCAGCCGCACTACGCACGACTGCACAACCAGCCCACCAATAACGACACC
ACCGGCGTGTTCGCACAGGGAAACTGGAAGGCAGAAATTGAAGATACAAA
CCAATGGCTACAGGTGGGGAAGATTTCGTTTTGTTTGCATTGCATACTCT
GTAAACCGCCTCATGGCATATCACTCAAGTTTGCACTTTATTTTCAGATT
TAACGTTATATCTATTTTCTAGCAGGTCACTTAATATCATCAGTTTTTAT
TTTTGTACTGTAGGTATCATTCCTTCAAGAAACAATCGTCACCGGAGTGA
TCTTACAGGGGAGTGCGAATGACGCAGCGTGGGTAGAGACGTACTACTTG
ACATACCTGAGTAACGGAAACGACACATGGAAGACGTATGTGGAAGGAGG
AGTACGACGGGTAAAGAACTAGGATTTACATGTTATCATTATATGCCAAT
GACGCTCGGTGGTAGAACATCTAGTAGGTTAATGTAGTTGATGTTACAAA
AGCTTTCGATGCTCAAATAGCTGATGTTTCAAAGGCTTTCGAGTTTCATA
TTATAGTAGATTTTGCAAAGGCTTTCGATGCTAATATTGACCTATGTAAC
TATTTTTTGTCATACGTCTTACGTTTGTTACTGTTGCCACTGCTATAAAA
ATATAAAAAAACAATACACACTGTTCCATATAACAGCTATAATGAACAGT
ACAACATATACACTTTTGCTTTAAAGCACATCTGAGATGAAATATATGAA
ATAAATAGGGCTATTAGAAACTGTTAACACTGTTTAAAAATACTAGTTTT
TTTTAATAATTAGATTTACCACCTAACGACTTATCCATTTTCAAAAATTT
CTTTCAAGGTATTCACAGGAAATACAGATTCCTCTTCAACGGTGCAACAA
GATCTTGCTGACCGTATCACAGTAACTGACATCCGGATCCATCCGCAAAC
GTGGCACGGGAGCATCAGTATGAGGATGGAACTTATCG Coding sequence (CDS) from alignment at Sc0000022:2610379..2612966+ >transcript:BL97054_cuf4 ID=transcript:BL97054_cuf4|Name=transcript:BL97054_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=6066bp|location=Sequence derived from alignment at Sc0000022:2610379..2612966+ (Branchiostoma lanceolatum) GGTTCTGAATCTTTCGTCGTGACCACAACGACTGTACTGTTGAGCATTGA GACTGAAGTGGATTACGAAGTGGCCCAGGAATACACCCTAATACTAGATG TACAGGACGACGGCGCCACACCACCAAGGACAGGAACAGTGGCAATCAAG ATCCTTATCGAGGACGTGAATGATAATTGTCCCATCCTAGAGGAGACGAT GTTTAACATCCACCCTCAGCCTGTCTTAAGAACGACTCCAGTGATGTCTC TCCTGTGGGAGGATAGAGACAGTGGGGACAACGCCAACACGACATTCCAC AGGACGCAGATCAACCAAACAATCATCTACGACAGCAGAAACGACAGCAC CCTGTTAGAGTTCCACATCATCGTGGTCGACAGAGGGACACCACGACGTG GAGACATAGCAACCGTTGCCATGACGATAAACGACGCATGTCTCTATGAC AGTTTGGACCAATCAATCACGCACGAGATAACTGTTGATGACGATACAGG AGGAGTGTTCGTTCGAGTACCGAAGTATTACGTCAAAGAATTTGAATGTG GTGCACCACTGGGGATGCAGAGTGCACTGATCTTCTTCACACAAATCACG GCGTCTTCCGCGTATGAATACTACCAGCCGCACTACGCACGACTGCACAA CCAGCCCACCAATAACGACACCACCGGCGTGTTCGCACAGGGAAACTGGA AGGCAGAAATTGAAGATACAAACCAATGGCTACAGGTATCATTCCTTCAA GAAACAATCGTCACCGGAGTGATCTTACAGGGGAGTGCGAATGACGCAGC GTGGGTAGAGACGTACTACTTGACATACCTGAGTAACGGAAACGACACAT GGAAGACGTATGTGGAAGGAGGAGTACGACGGGTATTCACAGGAAATACA GATTCCTCTTCAACGGTGCAACAAGATCTTGCTGACCGTATCACAGTAAC TGACATCCGGATCCATCCGCAAACGTGGCACGGGAGCATCAGTATGAGGA TGGAACTTATCGGTTCTGAATCTTTCGTCGTGACCACAACGACTGTACTG TTGAGCATTGAGACTGAAGTGGATTACGAAGTGGCCCAGGAATACACCCT AATACTAGATGTACAGGACGACGGCGCCACACCACCAAGGACAGGAACAG TGGCAATCAAGATCCTTATCGAGGACGTGAATGATAATTGTCCCATCCTA GAGGAGACGATGTTTAACATCCACCCTCAGCCTGTCTTAAGAACGACTCC AGTGATGTCTCTCCTGTGGGAGGATAGAGACAGTGGGGACAACGCCAACA CGACATTCCACAGGACGCAGATCAACCAAACAATCATCTACGACAGCAGA AACGACAGCACCCTGTTAGAGTTCCACATCATCGTGGTCGACAGAGGGAC ACCACGACGTGGAGACATAGCAACCGTTGCCATGACGATAAACGACGCAT GTCTCTATGACAGTTTGGACCAATCAATCACGCACGAGATAACTGTTGAT GACGATACAGGAGGAGTGTTCGTTCGAGTACCGAAGTATTACGTCAAAGA ATTTGAATGTGGTGCACCACTGGGGATGCAGAGTGCACTGATCTTCTTCA CACAAATCACGGCGTCTTCCGCGTATGAATACTACCAGCCGCACTACGCA CGACTGCACAACCAGCCCACCAATAACGACACCACCGGCGTGTTCGCACA GGGAAACTGGAAGGCAGAAATTGAAGATACAAACCAATGGCTACAGGTAT CATTCCTTCAAGAAACAATCGTCACCGGAGTGATCTTACAGGGGAGTGCG AATGACGCAGCGTGGGTAGAGACGTACTACTTGACATACCTGAGTAACGG AAACGACACATGGAAGACGTATGTGGAAGGAGGAGTACGACGGGTATTCA CAGGAAATACAGATTCCTCTTCAACGGTGCAACAAGATCTTGCTGACCGT ATCACAGTAACTGACATCCGGATCCATCCGCAAACGTGGCACGGGAGCAT CAGTATGAGGATGGAACTTATCGGTTCTGAATCTTTCGTCGTGACCACAA CGACTGTACTGTTGAGCATTGAGACTGAAGTGGATTACGAAGTGGCCCAG GAATACACCCTAATACTAGATGTACAGGACGACGGCGCCACACCACCAAG GACAGGAACAGTGGCAATCAAGATCCTTATCGAGGACGTGAATGATAATT GTCCCATCCTAGAGGAGACGATGTTTAACATCCACCCTCAGCCTGTCTTA AGAACGACTCCAGTGATGTCTCTCCTGTGGGAGGATAGAGACAGTGGGGA CAACGCCAACACGACATTCCACAGGACGCAGATCAACCAAACAATCATCT ACGACAGCAGAAACGACAGCACCCTGTTAGAGTTCCACATCATCGTGGTC GACAGAGGGACACCACGACGTGGAGACATAGCAACCGTTGCCATGACGAT AAACGACGCATGTCTCTATGACAGTTTGGACCAATCAATCACGCACGAGA TAACTGTTGATGACGATACAGGAGGAGTGTTCGTTCGAGTACCGAAGTAT TACGTCAAAGAATTTGAATGTGGTGCACCACTGGGGATGCAGAGTGCACT GATCTTCTTCACACAAATCACGGCGTCTTCCGCGTATGAATACTACCAGC CGCACTACGCACGACTGCACAACCAGCCCACCAATAACGACACCACCGGC GTGTTCGCACAGGGAAACTGGAAGGCAGAAATTGAAGATACAAACCAATG GCTACAGGTATCATTCCTTCAAGAAACAATCGTCACCGGAGTGATCTTAC AGGGGAGTGCGAATGACGCAGCGTGGGTAGAGACGTACTACTTGACATAC CTGAGTAACGGAAACGACACATGGAAGACGTATGTGGAAGGAGGAGTACG ACGGGTATTCACAGGAAATACAGATTCCTCTTCAACGGTGCAACAAGATC TTGCTGACCGTATCACAGTAACTGACATCCGGATCCATCCGCAAACGTGG CACGGGAGCATCAGTATGAGGATGGAACTTATCGGTTCTGAATCTTTCGT CGTGACCACAACGACTGTACTGTTGAGCATTGAGACTGAAGTGGATTACG AAGTGGCCCAGGAATACACCCTAATACTAGATGTACAGGACGACGGCGCC ACACCACCAAGGACAGGAACAGTGGCAATCAAGATCCTTATCGAGGACGT GAATGATAATTGTCCCATCCTAGAGGAGACGATGTTTAACATCCACCCTC AGCCTGTCTTAAGAACGACTCCAGTGATGTCTCTCCTGTGGGAGGATAGA GACAGTGGGGACAACGCCAACACGACATTCCACAGGACGCAGATCAACCA AACAATCATCTACGACAGCAGAAACGACAGCACCCTGTTAGAGTTCCACA TCATCGTGGTCGACAGAGGGACACCACGACGTGGAGACATAGCAACCGTT GCCATGACGATAAACGACGCATGTCTCTATGACAGTTTGGACCAATCAAT CACGCACGAGATAACTGTTGATGACGATACAGGAGGAGTGTTCGTTCGAG TACCGAAGTATTACGTCAAAGAATTTGAATGTGGTGCACCACTGGGGATG CAGAGTGCACTGATCTTCTTCACACAAATCACGGCGTCTTCCGCGTATGA ATACTACCAGCCGCACTACGCACGACTGCACAACCAGCCCACCAATAACG ACACCACCGGCGTGTTCGCACAGGGAAACTGGAAGGCAGAAATTGAAGAT ACAAACCAATGGCTACAGGTATCATTCCTTCAAGAAACAATCGTCACCGG AGTGATCTTACAGGGGAGTGCGAATGACGCAGCGTGGGTAGAGACGTACT ACTTGACATACCTGAGTAACGGAAACGACACATGGAAGACGTATGTGGAA GGAGGAGTACGACGGGTATTCACAGGAAATACAGATTCCTCTTCAACGGT GCAACAAGATCTTGCTGACCGTATCACAGTAACTGACATCCGGATCCATC CGCAAACGTGGCACGGGAGCATCAGTATGAGGATGGAACTTATCGGTTCT GAATCTTTCGTCGTGACCACAACGACTGTACTGTTGAGCATTGAGACTGA AGTGGATTACGAAGTGGCCCAGGAATACACCCTAATACTAGATGTACAGG ACGACGGCGCCACACCACCAAGGACAGGAACAGTGGCAATCAAGATCCTT ATCGAGGACGTGAATGATAATTGTCCCATCCTAGAGGAGACGATGTTTAA CATCCACCCTCAGCCTGTCTTAAGAACGACTCCAGTGATGTCTCTCCTGT GGGAGGATAGAGACAGTGGGGACAACGCCAACACGACATTCCACAGGACG CAGATCAACCAAACAATCATCTACGACAGCAGAAACGACAGCACCCTGTT AGAGTTCCACATCATCGTGGTCGACAGAGGGACACCACGACGTGGAGACA TAGCAACCGTTGCCATGACGATAAACGACGCATGTCTCTATGACAGTTTG GACCAATCAATCACGCACGAGATAACTGTTGATGACGATACAGGAGGAGT GTTCGTTCGAGTACCGAAGTATTACGTCAAAGAATTTGAATGTGGTGCAC CACTGGGGATGCAGAGTGCACTGATCTTCTTCACACAAATCACGGCGTCT TCCGCGTATGAATACTACCAGCCGCACTACGCACGACTGCACAACCAGCC CACCAATAACGACACCACCGGCGTGTTCGCACAGGGAAACTGGAAGGCAG AAATTGAAGATACAAACCAATGGCTACAGGTATCATTCCTTCAAGAAACA ATCGTCACCGGAGTGATCTTACAGGGGAGTGCGAATGACGCAGCGTGGGT AGAGACGTACTACTTGACATACCTGAGTAACGGAAACGACACATGGAAGA CGTATGTGGAAGGAGGAGTACGACGGGTATTCACAGGAAATACAGATTCC TCTTCAACGGTGCAACAAGATCTTGCTGACCGTATCACAGTAACTGACAT CCGGATCCATCCGCAAACGTGGCACGGGAGCATCAGTATGAGGATGGAAC TTATCGGTTCTGAATCTTTCGTCGTGACCACAACGACTGTACTGTTGAGC ATTGAGACTGAAGTGGATTACGAAGTGGCCCAGGAATACACCCTAATACT AGATGTACAGGACGACGGCGCCACACCACCAAGGACAGGAACAGTGGCAA TCAAGATCCTTATCGAGGACGTGAATGATAATTGTCCCATCCTAGAGGAG ACGATGTTTAACATCCACCCTCAGCCTGTCTTAAGAACGACTCCAGTGAT GTCTCTCCTGTGGGAGGATAGAGACAGTGGGGACAACGCCAACACGACAT TCCACAGGACGCAGATCAACCAAACAATCATCTACGACAGCAGAAACGAC AGCACCCTGTTAGAGTTCCACATCATCGTGGTCGACAGAGGGACACCACG ACGTGGAGACATAGCAACCGTTGCCATGACGATAAACGACGCATGTCTCT ATGACAGTTTGGACCAATCAATCACGCACGAGATAACTGTTGATGACGAT ACAGGAGGAGTGTTCGTTCGAGTACCGAAGTATTACGTCAAAGAATTTGA ATGTGGTGCACCACTGGGGATGCAGAGTGCACTGATCTTCTTCACACAAA TCACGGCGTCTTCCGCGTATGAATACTACCAGCCGCACTACGCACGACTG CACAACCAGCCCACCAATAACGACACCACCGGCGTGTTCGCACAGGGAAA CTGGAAGGCAGAAATTGAAGATACAAACCAATGGCTACAGGTATCATTCC TTCAAGAAACAATCGTCACCGGAGTGATCTTACAGGGGAGTGCGAATGAC GCAGCGTGGGTAGAGACGTACTACTTGACATACCTGAGTAACGGAAACGA CACATGGAAGACGTATGTGGAAGGAGGAGTACGACGGGTATTCACAGGAA ATACAGATTCCTCTTCAACGGTGCAACAAGATCTTGCTGACCGTATCACA GTAACTGACATCCGGATCCATCCGCAAACGTGGCACGGGAGCATCAGTAT GAGGATGGAACTTATC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
Sc0000022 | genome | Sc0000022:2610379..2612966 + |
Properties
Property Name | Value |
Transcript id | BL97054_cuf4 |
Biotype | protein_coding |
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