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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97024_cuf0 >transcript:BL97024_cuf0-protein ID=transcript:BL97024_cuf0-protein|Name=transcript:BL97024_cuf0|organism=Branchiostoma lanceolatum|type=polypeptide|length=171bp
QDNFLFPCFFSSDSARARMANQMENISLVYSAMNGLLQGVKEALEAGADI
DFDHPPCFEQTGSRSSMGTALLHACYKGHEDIVRLLLRKGASVAKRTSGS
FAPLHAAASNGFTEVVELLVNHGATVDIRDRFQHTPLMRACVYKHVDTVR
RLIELGARVDLITTEGYCQLA Run BLAST on NCBI mRNA from alignment at Sc0000220:21253..26584+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97024_cuf0 ID=transcript:BL97024_cuf0|Name=transcript:BL97024_cuf0|organism=Branchiostoma lanceolatum|type=mRNA|length=5332bp|location=Sequence derived from alignment at Sc0000220:21253..26584+ (Branchiostoma lanceolatum)
GACAAGACAACTTCTTATTCCCATGCTTCTTCAGTTCAGACTCAGCACGC
GCGCGAATGGCGAATCAAATGGAGAATATAAGCCTGGTGTATTCTGCTAT
GAATGGATTACTTCAAGGTGTTAAAGAGGCTTTGGAAGCTGGTAAGCAAA
GATAGTGTTTAAAATGGTGACGTAGAACTTGGTGTCGAACTTACTGTGTA
TGTATAATGTAGGAAATCTGGATTCAATGATAGCTGCCGGAGTAACTTGT
GTTTCCGTGAAATCAAGAAGTTTGTATAACGTCCGTAGTTAAATACGACT
TTTATTTAGTTCCTTAAGTATTAGTATCTTCAAGGAGATTGACTAGAACC
GCCTTGGTATCCTACACTCCGTTGCAGGCCTTCCCACTAGCGATTTTTAC
TAGCGATTTGGGGGNGTGTTTTCATTCTCGCCGAATCGTGTTTCACTTGA
TAAAACCAACCGAACTGGCCGTTGAATTGTGATGTTATTGTAACAAGTTG
GCAGTGCAACGTGAATGTAATAAGCTGGCGAAGTGTTAAGCCATTAGAAA
TTATTCTAGGTGAACAAAGGCAACACGAATAAAAGTTAACAAGTCTGTTA
TTTGGATGCTTCCTCCTTTGTGTGTGTAAGTTCACGTGGCATTTGCAGGA
CACCAGCTCAACGTTACGTAGTATGACTATGAGTCAAAGTCCAGGGCAGG
TACTAATATTACTGAACGACTCTGTCCCTATTTTAGTCGCAGCCCCGTAA
AGTCATTGCATGCAACGTTCGGAAATCCTGCATAGGTCAGTACTAATAAG
ACTTGAGAATCATATTGGCGAGAAACCGTTTGTCTTAGAATTAACAAATT
TATTCACTGAGCTGAGTAGTGATTAGCTTCTGCGTATGGGTGAAGTAAAG
GAAAATTCAGCCCTCCCAACATAATGTGCATCCTTTGGAACGGTCTTGGT
CTATGTACCAGTACGACTCTGCTTGTACTGGTAGATAAAAGATCGCAACC
AACCAACCAAGCACGCATGTCCACACACGAACGGTAAGAATGTCTTTGCA
CATTTGTGCATCAAATTGATCAATCACTAAAAGCAAGATTTGTGTAGGAA
GATATCATTTGTTTCTGAAAAAGCTGTATACTATGATAAGTCATTAATAT
TCCTTCTCTCAGCCTTTACGTTTTCATTTATTAGTATGACAATAGCTCAC
GTGACAAGATAATAGCTCACGTGACAAGACAACTTCTTATTCCCATGCTT
CTTCAGTTCAGACTCAGCACGCGCGCGAATGGCGAATCAAATGGAGAATA
TAAGCCTGGTGTATTCTGCTATGAATGGATTACTTCAAGGTGTTAAAGAG
GCTTTGGAAGCTGGTAAGCAAAGATAGTGTTTAAAATGGTGACGTAGAAC
TTGGTGTCGAACTTACTGTGTATGTATAATGTAGGAAATCTGGATTCAAT
GATAGCTGCCGGAGTAACTTGTGTTTCCGTGAAATCAAGAAGTTTGTATA
ACGTCCGTAGTTAAATACGACTTTTATTTAGTTCCTTAAGTATTAGTATC
TTCAAGGAGATTGACTAGAACCGCCTTGGTATCCTACACTCCGTTGCAGG
CCTTCCCACTAGCGATTTTTACTAGCGATTTGGGGGGGGGGGGGCGCATC
TGCTTGAGCCACCGTATCTGCTTGGAATCCTGTGACACAGCCCCCCCCCC
CCAAATAAAAGAAAATGGAAAAAAAAATCGCTAGTAAAAATCGCGATTGG
GAAGGCCTGCAACGGAGGCTACGCCTTGTTATACTACACACCCTTTTTGA
GCAAGTTCATTCATTTATAGAGGCACCAGTCTCTCCGCCATGCTCCAAAG
GGACGGCGCCAATGTATTAGTAGTAGCTGATGGGCAACATCCTTACCGAC
CTATTTCGTTATTTTTGTCTCAATATCTCGCTGAGTGCCCAACCACGCCG
CATGTGCACTGGATAGTTTTCTACTAATATTTGCAGCTATATTCAGTAGT
ACTTTACATTTACAGTTTACAGAACGATTGTATTTTATTACCTTCGCCGA
GAAGGTTATGCAGAGGGTAGCGTTTGTGTGTGTGTGTGTGTTTGTTTGTA
ACAAACAGCATAACTCTAGAAGGCTTGGATGGATTGTCTTGATATTTGGG
AGGTGGGTAGATCTTGATGAGACATGGAAATGATTAGATTTTGGGTCCCC
TAGCGGCTTGTTACGGTGCTGCAGCCGAACTTCCTGTTTTGATATCTCAT
GTTCTGGACATGCTATGGTCCTAATTTTTAAGTGGTAGATACCTCTGGAC
AGAGAGTAAGTAGTATAGGTTTTGGCCCCCTATCGGCTTTTTTGGAACTA
CAGGAGCAGGTTTTGCTTCAGACTTTGAAAGGGAATAACTCAAGAAGGGC
CTGATGGATGGTCATGATTTTTGGTAAGTAGATAGCTTGTATTGTGAATG
TTTTCCGTCAGATGTGGATTCAAAAAGAGGGCTTTGTACTAGTAGATGTT
CATTCAAATGTAAATACATATATTTGGACACAAGTGAACGAGTGACACCT
TTTCCGTATTACGAATTGGGGCTGAAAAGGAAGTCTGGCAAGTTTGAACT
AGTCATCACTGAGCTAGGCTTTAGATTTGTGCAAAATTATATCGATAGTA
TGACATCTCAAATCTGTGATTTAACGTTAGTTTTACTAAACTGTTAATTA
TTGATCACTTAATGCAGGTGCAGACATTGACTTCGACCATCCTCCTTGCT
TCGAGCAAACAGGCAGCAGGTCAAGCATGGGCACAGCATTGCTCCATGCT
TGCTACAAGGGACATGAAGACATAGTGAGACTGCTGCTCCGCAAGGGGGC
GTCTGTGGCGAAAAGAACCAGTGGTTCATTTGCTCCTCTTCATGCAGCGG
CGTCTAACGGTTAGTCTATTCAAAACAAATCAAATCAATGCTGCCTTGCC
TGTTGTGACGAAGCTACATGTGACATGTGACAGCATAACTCTAGAAGGAC
TCAATATGCTCAACCAGTTTTTCCAGTTCGTTAGTGACTGGGTATATAAA
AGCTTATTTACCCCTGCTAAGCCAGTTCTAAAGATTATGTCAAAGTTATC
AGATATCTAAAACATGAAGTGATTCACCTAGAATAGTAATGGTGAATGTA
GGCTTAGCTATGCTGAAATTCTAGGTGTGAAATGATTCAGTCAATTTTCC
AAAACATTTTTAAGTAAACCTATTACTAGAATCGGAGATTGTCCTGGTAG
AATTCCTATCTCTACTAGTAGAATCTGGAATTCTCCTAGTAGAAGAGATT
GGAATCCCAATATTCAGATCCCGATTCCAATCTCTACTAGTAGATTCCAA
TTTCTACTAGTAGAGATTGGAATTCCAATCTCAACTAGTAGAATCCAGAA
CTCTACTAGTAGAGATTGGAATTCCAGTCTCTACTAGTAGAGATTGGAAT
TAACTAGTAGAGATTGGAATTCCAATCTCTACTAGTAGAGTTCCGGACTC
CAATCTCTACTGTGACATATACATAGAATAGATCGGCAAAATATATATGT
CATTTCACTGCGAAATGATGTATTTAACGCCTCTTATATTCTACTGTCGT
TTACTCGTTACACAGCGTGCAATCACGGCATCTTGAAATATCGTGTCGAC
TCTTCAACATACACAGTCAAAGACGTTGATTGTTAATAGAATGTTATGCC
ATACGGTGTAAGCTAACCTAGCGAAGAGGACCCACTCAACGGGTGTAACC
GTAATAGTGGAGAGGTATACGTTCTAGCAAGGAGGTTATGAAAAATAGAG
CTAACAGTTTCATTCGCCACCAGGTAAGATTACAGGGGAACTGAAAAGCT
AGACTGCTAGGAAACGCTTTGTCTTCCTATGACGGTATTTCAGATTTTAG
CGTCGTATTGTCTCTTTGTGTTTACATTGCATATTACTTCGTGGAAGGCA
ACGGTTTATTCTCAAGTTGATATGTATTTCTTATGTCACAAATCCGACCG
CAGGGTTTACAGAAGTGGTGGAGTTGTTGGTGAATCATGGTGCAACAGTA
GACATACGGGACCGCTTCCAGCACACGCCACTCATGAGAGCCTGTGTCTA
CAAACATGTGGACACAGTTCGGCGACTGATTGAGCTTGGAGCAAGAGTGG
ATTTGATCACCACCGAGGGTTATTGCCAGTTAGCCCAACAGTAAGTGTCA
CACACTTTTGGAATCACAATATAATGAATGATTGTTTTTTCTGTAGACAA
ACTTTAAAATAAAGCTGGACTGATGCGTCGGCTTCTTTGTCTCTGTCATT
TCGTGCGTGTCGCTTTGAACTGTCTGAATTTTAGGCCGTACGCTCTGAGG
GAGGCGAAATGTATATATGCGTGTATTGATACCCCGTGGCATGTAGCCTC
CGTTGCAGTCCTTCCCACTAGCGATTTTTTAGCGATTTTTTTTGCGTTTT
TTAGCGTTTTTTTAGCTATTTTATTTGGGGGGGGGGGCGTATCTGCTTGA
GCCCCCGTATCTGCTTGGGATCCTGTTACCGCTGAGCGATCACGGGCTCA
CAGCGGTAGTAACGGGATCGCTAGTGGGAAGGACTAGTGGGAAGGACTGC
AACGGCGGCTACGTGGCATGGCTAATTAACTGAATGGCACTATTTTCCAC
TAGGTTTGGGATGGAAGTAGGAGATTGTGACTGGGAAGACTGTATAAAGC
TGATACAAGAGGCGAGGAAGACCAAGCTGTTGAGATGCTGCAACCCGAAG
TGTNTTACACAGCGTGCAATCACGGCATCTTGAAATATCGTGTCGACTCT
TCAACATACACAGTCAAAGACGTTGATTGTTAATAGAATGTTATGCCATA
CGGTGTAAGCTAACCTAGCGAAGAGGACCCACTCAACGGGTGTAACCGTA
ATAGTGGAGAGGTATACGTTCTAGCAAGGAGGTTATGAAAAATAGAGCTA
ACAGTTTCATTCGCCACCAGGTAAGATTACAGGGGAACTGAAAAGCTAGA
CTGCTAGGAAACGCTTTGTCTTCCTATGACGGTATTTCAGATTTTAGCGT
CGTATTGTCTCTTTGTGTTTACATTGCATATTACTTCGTGGAAGGCAACG
GTTTATTCTCAAGTTGATATGTATTTCTTATGTCACAAATCCGACCGCAG
GGTTTACAGAAGTGGTGGAGTTGTTGGTGAATCATGGTGCAACAGTAGAC
ATACGGGACCGCTTCCAGCACACGCCACTCATGAGAGCCTGTGTCTACAA
ACATGTGGACACAGTTCGGCGACTGATTGAGCTTGGAGCAAGAGTGGATT
TGATCACCACCGAGGGTTATTGCCAGTTAGCC Coding sequence (CDS) from alignment at Sc0000220:21253..26584+ >transcript:BL97024_cuf0 ID=transcript:BL97024_cuf0|Name=transcript:BL97024_cuf0|organism=Branchiostoma lanceolatum|type=CDS|length=1539bp|location=Sequence derived from alignment at Sc0000220:21253..26584+ (Branchiostoma lanceolatum)
CAAGACAACTTCTTATTCCCATGCTTCTTCAGTTCAGACTCAGCACGCGC
GCGAATGGCGAATCAAATGGAGAATATAAGCCTGGTGTATTCTGCTATGA
ATGGATTACTTCAAGGTGTTAAAGAGGCTTTGGAAGCTGGTGCAGACATT
GACTTCGACCATCCTCCTTGCTTCGAGCAAACAGGCAGCAGGTCAAGCAT
GGGCACAGCATTGCTCCATGCTTGCTACAAGGGACATGAAGACATAGTGA
GACTGCTGCTCCGCAAGGGGGCGTCTGTGGCGAAAAGAACCAGTGGTTCA
TTTGCTCCTCTTCATGCAGCGGCGTCTAACGGGTTTACAGAAGTGGTGGA
GTTGTTGGTGAATCATGGTGCAACAGTAGACATACGGGACCGCTTCCAGC
ACACGCCACTCATGAGAGCCTGTGTCTACAAACATGTGGACACAGTTCGG
CGACTGATTGAGCTTGGAGCAAGAGTGGATTTGATCACCACCGAGGGTTA
TTGCCAGTTAGCCCAAGACAACTTCTTATTCCCATGCTTCTTCAGTTCAG
ACTCAGCACGCGCGCGAATGGCGAATCAAATGGAGAATATAAGCCTGGTG
TATTCTGCTATGAATGGATTACTTCAAGGTGTTAAAGAGGCTTTGGAAGC
TGGTGCAGACATTGACTTCGACCATCCTCCTTGCTTCGAGCAAACAGGCA
GCAGGTCAAGCATGGGCACAGCATTGCTCCATGCTTGCTACAAGGGACAT
GAAGACATAGTGAGACTGCTGCTCCGCAAGGGGGCGTCTGTGGCGAAAAG
AACCAGTGGTTCATTTGCTCCTCTTCATGCAGCGGCGTCTAACGGGTTTA
CAGAAGTGGTGGAGTTGTTGGTGAATCATGGTGCAACAGTAGACATACGG
GACCGCTTCCAGCACACGCCACTCATGAGAGCCTGTGTCTACAAACATGT
GGACACAGTTCGGCGACTGATTGAGCTTGGAGCAAGAGTGGATTTGATCA
CCACCGAGGGTTATTGCCAGTTAGCCCAAGACAACTTCTTATTCCCATGC
TTCTTCAGTTCAGACTCAGCACGCGCGCGAATGGCGAATCAAATGGAGAA
TATAAGCCTGGTGTATTCTGCTATGAATGGATTACTTCAAGGTGTTAAAG
AGGCTTTGGAAGCTGGTGCAGACATTGACTTCGACCATCCTCCTTGCTTC
GAGCAAACAGGCAGCAGGTCAAGCATGGGCACAGCATTGCTCCATGCTTG
CTACAAGGGACATGAAGACATAGTGAGACTGCTGCTCCGCAAGGGGGCGT
CTGTGGCGAAAAGAACCAGTGGTTCATTTGCTCCTCTTCATGCAGCGGCG
TCTAACGGGTTTACAGAAGTGGTGGAGTTGTTGGTGAATCATGGTGCAAC
AGTAGACATACGGGACCGCTTCCAGCACACGCCACTCATGAGAGCCTGTG
TCTACAAACATGTGGACACAGTTCGGCGACTGATTGAGCTTGGAGCAAGA
GTGGATTTGATCACCACCGAGGGTTATTGCCAGTTAGCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000220 | genome | Sc0000220:21253..26584 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97024_cuf0 |
| Biotype | protein_coding |
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