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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97023_cuf2 >transcript:BL97023_cuf2-protein ID=transcript:BL97023_cuf2-protein|Name=transcript:BL97023_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=132bp
MASLVLRGAVRLSSGARMGLLRPSCVARDTVLPLRGCSRALTSGATEKFT
HTGQAYEEKDYRKVRFIDAKKEVNPHFAIELVAEEPPIEVVGSTACCDGG
GGALGHPKVYINVDPDGPHPCGYCGLRFIKKH Run BLAST on NCBI mRNA from alignment at Sc0000322:144719..147352- Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97023_cuf2 ID=transcript:BL97023_cuf2|Name=transcript:BL97023_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=2634bp|location=Sequence derived from alignment at Sc0000322:144719..147352- (Branchiostoma lanceolatum)
AGACCCTGCTTAGCCTCTGTAACAGGCGCCATGGTGGCGTGGGGTGAAGG
AAAGGGGTCCTTCGCGAGGCCTGAAAAATCGAGGGAAGATACTGAAGCCG
CTGTCGTGGACTTCGAGAATATGAGAATGTCACTTGGGTAATGTCAACTA
TTACTGGGGGTAGTGCTTTATATTAATGTCTATAAAATTGAATAAAATCA
ACATGATTTATAAATCTTATCAAATAGTTCGTCTGTAATCAATATTTAAT
TTGTCTTTGTATGATTTTTATAATTTTCTGCTTTTGATATGCATAAAACA
ATGCCGGTCTTTACTATAGTCCCCTACTGTATCAATGAACCATTCCGATG
ACCCTTGCCACCCAAAATGGCGTCGTTAGTGCTGAGAGGAGCGGTCCGCC
TGTCGTCCGGAGCTCGGATGGGCCTTCTGCGCCCGTCTTGTGTGGCCAGG
GACACTGTTTTACCCCTGAGAGGATGTAGCAGAGCTCTGACGTCTGGAGC
CACGGAAAAATTCACTCATACTGGGCAGGTAAGGAGGGTAAAATGACACA
AAGTTCCATGACCTTCGTAGTGTAAAATTGCATTCCTAACGTTTAAGTCA
ACTCGTTTTTGTGGCTAAAATGTGTACATGTAAAGGAACGTTAGCCGTTC
CATTTTTTGATCCACGCTGTTGTCAGAAACTTGAGACTAATGTGTGTGTG
TGTTTAATATGACTATTTCTGCAGGCGTACGAGGAGAAAGATTACAGAAA
AGTCCGTTTCATAGACGCAAAGAAGGAGGTAAGAAAGCGGACTTGTTGTC
ACCCTGATATTTGTTTGTAAAGGACTCTATCGTTACTTATCTAATGTTTG
TATTAAGTTATAATATATCATGTTTTGTTTTACTAGGTTGTTCTGAATGT
ATTAATGTTGACAACGCGTGTTGTTTTCAAGTTGCTGTTATAAGATTTCA
GTTGTGTCTGCAAAGTAAAAGGGTACTTTTATTCACACAGCAGTGTACTT
TATATGAATTGTTCTGTTTACTTACTTACTTTTGCTTGGTTTACCACAGG
TGAACCCCCACTTTGCCATTGAGCTGGTAGCTGAGGAACCACCTATTGAA
GTGGTGGGTAGTACAGCCTGCTGTGATGGAGGTGGAGGGGCCCTGGGACA
TCCTAAAGTCTACATCAATGTGGTCAGCACTGCTTTTCCTTCCATTTCTG
TCATCAATTCTCACAATAGAGTTTTCTAAGTTTCTAACTAAGCCTCCTTT
TTTTGCTGAAGGTATTGTGTGCATTAAGTTTAACCTGCTTTCCAAAGAAA
TCTTTTTCACAAATGAACAATGACATGTAACAAAACTTGAAATTCGTAAC
AAGACAAACGAACAAAAGATGCAAAGTATGAAGATGTGAATGTTGCTATT
CCTGAATTCAAAATCATTACAGAATGAGAATATCTGAGTTAATTTTCAGG
TGAAAAATGAATGTATAATGTAAGCTGAATTTATCCCAAAATCAGACTTA
CAACTTTCATTTTTAATCGTTTTTCTGGCCCTAGCTTAGCACAATTGAAA
GTATGCTGTGTGAGTCATTTTGTTTGAAAATTTAATACTTAGAAAAAAAA
CTTTTTAGGTATGTGATTAGTGATGACATATTATTTCAAAGAGAAACCAC
TTTTTTATCTAACATACACTTCTTGTCTGTACAGGACCCGGATGGACCAC
ACCCATGTGGGTACTGCGGCCTACGTTTTATCAAGAAGCACTGATGTTAA
ATCATAAATAAAATAGACATCACAGCTCTGTCCATTGTTTCTGTTTTCCC
TCAAAAGTGATCTTTAGCCGTAAGGAGTGAAAAGACATGTTCACTGTAAA
ACTATGGGAAATATTGTCTGTATCCTGATACTTACTTGCCTGAGCTATTC
TATCACCCTGGATGAATGATTTGCTGTGACCTACTAGTAGTAAATCTAGT
CAACTATTGTACATTAACAGCAAAAGTGTTGGCTGAAATGTCCAGAGATG
TACAAAACATTAAACTCAGTTTAGACTACTAGTATAAAACTGGTATCACA
CGTTTTCTTGTACACATGTTTTGTTGAATAAAATCATGATATATGCTGTT
TCTGTCTGAGTTAACTGTAATTTTACTAACCCTTTTCTGAGTTATCAAAT
ACTGGTACACAAGTATGTAATGGTACTCAATAAGACATACTAGTATCTGA
AGAAAGGAACAGAGACCAGTCAAGAAAGGTTTATCAGTATCAAAGAACAT
GCATTTACTGCTACCAAATATGAGAACAGTCATATGATAGCCTCCTTGAT
AATAGTGCAAGCAACTAGTCTCCACCAGGCCTCTCTGCAGACTGAAAATG
TGATAGAAATTTGTCAAAATGGGAATTTTTGGCCAGTAGAGCTGGCTGCC
TATGAGTGCTGTGAAAAATACTAATATACCCTGAGAATTTTCTTGGCTTG
GAGAGCAATGAAATATTGTAGGAAAGAAGGGTCTGGCGATGTTTAATCAC
CCTTGGTTTAATACTACAAAATGTATATGTAATATCATCATGTGTCTCCA
AAATGGGACAGGCAAATTTGTTATCACAGAAAGTAGTGGGAAGTAGACAT
TAAGAAAAGGAAAAGAGAGAGAGGATTGTTGTAC Coding sequence (CDS) from alignment at Sc0000322:144719..147352- >transcript:BL97023_cuf2 ID=transcript:BL97023_cuf2|Name=transcript:BL97023_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1596bp|location=Sequence derived from alignment at Sc0000322:144719..147352- (Branchiostoma lanceolatum)
ATGGCGTCGTTAGTGCTGAGAGGAGCGGTCCGCCTGTCGTCCGGAGCTCG
GATGGGCCTTCTGCGCCCGTCTTGTGTGGCCAGGGACACTGTTTTACCCC
TGAGAGGATGTAGCAGAGCTCTGACGTCTGGAGCCACGGAAAAATTCACT
CATACTGGGCAGGCGTACGAGGAGAAAGATTACAGAAAAGTCCGTTTCAT
AGACGCAAAGAAGGAGGTGAACCCCCACTTTGCCATTGAGCTGGTAGCTG
AGGAACCACCTATTGAAGTGGTGGGTAGTACAGCCTGCTGTGATGGAGGT
GGAGGGGCCCTGGGACATCCTAAAGTCTACATCAATGTGGACCCGGATGG
ACCACACCCATGTGGGTACTGCGGCCTACGTTTTATCAAGAAGCACTGAA
TGGCGTCGTTAGTGCTGAGAGGAGCGGTCCGCCTGTCGTCCGGAGCTCGG
ATGGGCCTTCTGCGCCCGTCTTGTGTGGCCAGGGACACTGTTTTACCCCT
GAGAGGATGTAGCAGAGCTCTGACGTCTGGAGCCACGGAAAAATTCACTC
ATACTGGGCAGGCGTACGAGGAGAAAGATTACAGAAAAGTCCGTTTCATA
GACGCAAAGAAGGAGGTGAACCCCCACTTTGCCATTGAGCTGGTAGCTGA
GGAACCACCTATTGAAGTGGTGGGTAGTACAGCCTGCTGTGATGGAGGTG
GAGGGGCCCTGGGACATCCTAAAGTCTACATCAATGTGGACCCGGATGGA
CCACACCCATGTGGGTACTGCGGCCTACGTTTTATCAAGAAGCACTGAAT
GGCGTCGTTAGTGCTGAGAGGAGCGGTCCGCCTGTCGTCCGGAGCTCGGA
TGGGCCTTCTGCGCCCGTCTTGTGTGGCCAGGGACACTGTTTTACCCCTG
AGAGGATGTAGCAGAGCTCTGACGTCTGGAGCCACGGAAAAATTCACTCA
TACTGGGCAGGCGTACGAGGAGAAAGATTACAGAAAAGTCCGTTTCATAG
ACGCAAAGAAGGAGGTGAACCCCCACTTTGCCATTGAGCTGGTAGCTGAG
GAACCACCTATTGAAGTGGTGGGTAGTACAGCCTGCTGTGATGGAGGTGG
AGGGGCCCTGGGACATCCTAAAGTCTACATCAATGTGGACCCGGATGGAC
CACACCCATGTGGGTACTGCGGCCTACGTTTTATCAAGAAGCACTGAATG
GCGTCGTTAGTGCTGAGAGGAGCGGTCCGCCTGTCGTCCGGAGCTCGGAT
GGGCCTTCTGCGCCCGTCTTGTGTGGCCAGGGACACTGTTTTACCCCTGA
GAGGATGTAGCAGAGCTCTGACGTCTGGAGCCACGGAAAAATTCACTCAT
ACTGGGCAGGCGTACGAGGAGAAAGATTACAGAAAAGTCCGTTTCATAGA
CGCAAAGAAGGAGGTGAACCCCCACTTTGCCATTGAGCTGGTAGCTGAGG
AACCACCTATTGAAGTGGTGGGTAGTACAGCCTGCTGTGATGGAGGTGGA
GGGGCCCTGGGACATCCTAAAGTCTACATCAATGTGGACCCGGATGGACC
ACACCCATGTGGGTACTGCGGCCTACGTTTTATCAAGAAGCACTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000322 | genome | Sc0000322:144719..147352 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97023_cuf2 |
| Biotype | protein_coding |
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