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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL97016_cuf10 >transcript:BL97016_cuf10-protein ID=transcript:BL97016_cuf10-protein|Name=transcript:BL97016_cuf10|organism=Branchiostoma lanceolatum|type=polypeptide|length=239bp
VGTLSLNSTSATITTDVSVSSTMTMSVAQNWTMDLVNRTTEAYTVLVRKI
EQEMTQKLLVNVGFQGLEVTQFKQTASNQILVVVRIVTAVYAQTSTQQTF
ITTVQSGRVGTLSVVRTSAAIKTDVTTSQTAQMTLMQTWSADLQNSTSQT
YVTLQKQVVNAMNIELGNTVGFQRVVVTKFTKSSNNTVITEVRMITAAYA
VNAVENVFVQAVSTGQVQGITVDKASANIVRDVSVSSQV Run BLAST on NCBI mRNA from alignment at Sc0000025:1363298..1366477+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL97016_cuf10 ID=transcript:BL97016_cuf10|Name=transcript:BL97016_cuf10|organism=Branchiostoma lanceolatum|type=mRNA|length=3180bp|location=Sequence derived from alignment at Sc0000025:1363298..1366477+ (Branchiostoma lanceolatum)
AGTTGGGACCCTAAGTCTGAACTCAACATCAGCTACGATAACCACAGATG
GTACATATTCAGAACATTTACCACTGCCTTAGTTTTTCTACCTATATCTA
TATCCTGCATAAGCAAGAGACAAAAAATCTCTCTGTATATCCATTTGTCT
CAAGGACGATTGTATCATCATCATGTTGGGGTGCTTTTGTCTTTGTCTTT
CATGATGATCACTTCACAATGAAGTAAATTCTCTATATAAGATTTGTTTG
AGCAATTTCTAACTATTGTACAACTATGGTTGTTTTAACCAACCTTTGGC
TACAGCAAAATAGAGAGTTTTACGGATTTTTGTCCTTGTCGGTGTAGTGA
GCGTGTCGTCTACGATGACTATGTCTGTGGCACAGAACTGGACAATGGAC
CTGGTGAACAGAACAACAGAGGCCTACACAGTTCTTGTTCGGAAGATAGA
ACAAGAGGTATACCACTCATTTCTTACATTCATCTATCCATTCATCGCAC
ATTCATCCATCCATAGATCCATCCACCGATCCGTGTGTTGCATCTCTTGA
CGTGACAGGTCGTTCGGTGTAATATAACCAGCTGCTACGACGCCGCGTGC
CCGTGAAGCTGTGTGTTATGCCGAAGGGCGGTTATACCGGCTATATACTT
AGATACAGATCTCCTTTGAAAGAACGAGTGAATGGTTTAGACGAAAATTG
CTGGAAGGGGTATAATCTATTTCTGTTCAGGCACGTGTGTGGAGTAACTC
ATTTTGGCTAAAAGGAATGGTTTGAACCATTGTTTACAATCCTTTTACAT
TTTCAGATGACACAAAAACTTCTGGTGAACGTTGGATTCCAGGGGCTTGA
AGTGACTCAGTTTAAACAAACGTAAGTAAGACAGACAGCTATATTTATTT
CTTCATTTGGATTAAATTTCTGTGTAATACGTCTCATCTAGCATCATTTC
ATTTCTGCCTTCAACGCCACAGGTGGTAACAATGTTAGTATTAGGTATAT
GACACTAGTTTGCTATTTCAAGTCGGTGTGTTGCATTGAAGTGCAGTTAT
TTCGGCTATACAATGCAGAATACAGATGTTAGATTATGTAAGCGACGTTT
CATTTATACACTACAGGGCGTCCAATCAGATCCTTGTGGTTGTGAGGATT
GTAACAGCCGTGTACGCCCAGACATCGACACAGCAGACCTTCATCACCAC
AGTGCAGTCTGGCCGTGTAGGAACCCTGTCTGTTGTCCGCACATCAGCGG
CCATCAAAACGGACGGTTTGTACACTTCAACTGTCTTTCTGTTAACACCA
ATGCATATATCTCCCAAAACGTAGGGAATTTCATACTCCACTGCACACAA
AAAAGAAATCAAACCCATTTTGATTAGAAGAAGCTCTAGTTGACATAATT
TTACTTGTGTTTATTTCATTACTGTGTACTTATAATTGTCATTATCTCAT
TTCATTATATTCTTGCAATTAACCTCCGCGCATGAATTTGGAATAAAGTT
ATTATAAGTATCAATTATTATTATCAAAATGTAGCTTTTTGTTGACTTCA
TTTTACAAAAAAGGCTCATTGTGAACCACTCAAATGTTTAGGGATACAGT
TACATTGTTGTGATGACCGATGTATGTTGACCTTTACTGTTGGCAAATGT
GTGTTCACATTAGTCGTGAAAAAATTAGGTTATACCAATCAGGGAAGCAA
TCACGATGAAGCTTGTTCCATGAAGACTGAAGGCTTTAGAAACTGTCGAT
GAAGGTCCTTCATTGCCATCTCTGAGAGACTTTTAAAGATGCTGGTTTTT
CTATGTTTAATACAGTTTTCCAAATGCTTTCTTTAATCATGACTTGTCAT
CTTGTCAATACAAGAAAAGTATCCTCAAAGTTTATTTTCAAAACCAAACA
ATGCCGGTATTTTCTGCAGTGACGACCTCCCAGACTGCCCAGATGACCTT
GATGCAAACATGGTCTGCTGACCTTCAAAACAGCACTAGTCAGACTTATG
TGACCTTGCAGAAGCAAGTTGTCAATGCGGTATGTATTTCTAGCTGTCAA
TCATGGCCATAACAGCTGCTATATTTCAGTACCAGGGACATGGCGCTTAT
CTTAAGTGCACTGATACAGAACATTTAGAAAACGTATGAGGAAATGATGG
CTAAATTTTACGGTAGCCGTGCTTTCAGCACCAAGGCCATGTCCATAGGC
TAAACTTTTTCGTGTTGTTGTTCGCACTGTTCTTTGGCTTAAGAGTTGGT
GGGATCACAGTCTTACCTGCCGACATAGTCTCTGATGACTATGCCTGTTC
TACGAGAGGCACATTCGGTTCAACCTTGGGCAACTGAATCCAACTGTGTA
TTTTGACGGAGTAGTTAACTCTTGGGCTTTAGACTGCCCCTATCTTTGTG
CATCTCCGCCTGTACTCTGCAGCATTTCGTCGTTTATAACATGGTAAAAA
GTTGTATTCTACATCCACAGATGAACATAGAGCTGGGAAACACTGTTGGC
TTCCAACGAGTCGTTGTAACAAAGTTTACAAAAAGGTAGGCCATTTCCCT
CAGTTCTTGACAATGATTTTTTTTTCTAGCAAGGTAGCCAAGCATAATGA
AAATGAAGACTACAACGTTTTCAAAAATGTTGAATACATCTGCATTGTTT
TGTCCATGGTCTTCCAGTCAAAATATTTCAAATAAAAAATCTATGTCATC
CCATGTTTTTGTTACAGTTCCAACAACACCGTTATTACCGAAGTACGTAT
GATAACGGCGGCCTATGCAGTCAACGCTGTAGAAAACGTTTTTGTACAAG
CAGTTTCAACCGGACAGGTGCAAGGAATCACCGTAGATAAGGCATCTGCA
AACATTGTCCGGGATGGTAAGATATGCGTGGAGTTTCAAGATCACGTTAT
TTTCATAATCTCACTACAGTAGCTTCGTTTTATTTTGTGTTAATTTAAAA
TCAGCCGTTATAGCATGTCTTTTAGCATGATTTATATCAACATAGTAGAA
GTCAAGCCTGTGATCTTGTGGGACCAAGGAAATTAAGGCGAAGAATGTCG
AAAGCATTGAATTCCGTTGTCTGCCTTTGATTGCAACATACGTATTACCC
ACTGTATCACTGCAATTCAAACATGTAATTTGTGTATTTGTTTACTTGCT
CTTTTCAGTAAGCGTATCTTCCCAAGTTAC Coding sequence (CDS) from alignment at Sc0000025:1363298..1366477+ >transcript:BL97016_cuf10 ID=transcript:BL97016_cuf10|Name=transcript:BL97016_cuf10|organism=Branchiostoma lanceolatum|type=CDS|length=5736bp|location=Sequence derived from alignment at Sc0000025:1363298..1366477+ (Branchiostoma lanceolatum)
GTTGGGACCCTAAGTCTGAACTCAACATCAGCTACGATAACCACAGATGT
GAGCGTGTCGTCTACGATGACTATGTCTGTGGCACAGAACTGGACAATGG
ACCTGGTGAACAGAACAACAGAGGCCTACACAGTTCTTGTTCGGAAGATA
GAACAAGAGATGACACAAAAACTTCTGGTGAACGTTGGATTCCAGGGGCT
TGAAGTGACTCAGTTTAAACAAACGGCGTCCAATCAGATCCTTGTGGTTG
TGAGGATTGTAACAGCCGTGTACGCCCAGACATCGACACAGCAGACCTTC
ATCACCACAGTGCAGTCTGGCCGTGTAGGAACCCTGTCTGTTGTCCGCAC
ATCAGCGGCCATCAAAACGGACGTGACGACCTCCCAGACTGCCCAGATGA
CCTTGATGCAAACATGGTCTGCTGACCTTCAAAACAGCACTAGTCAGACT
TATGTGACCTTGCAGAAGCAAGTTGTCAATGCGATGAACATAGAGCTGGG
AAACACTGTTGGCTTCCAACGAGTCGTTGTAACAAAGTTTACAAAAAGTT
CCAACAACACCGTTATTACCGAAGTACGTATGATAACGGCGGCCTATGCA
GTCAACGCTGTAGAAAACGTTTTTGTACAAGCAGTTTCAACCGGACAGGT
GCAAGGAATCACCGTAGATAAGGCATCTGCAAACATTGTCCGGGATGTAA
GCGTATCTTCCCAAGTTGTTGGGACCCTAAGTCTGAACTCAACATCAGCT
ACGATAACCACAGATGTGAGCGTGTCGTCTACGATGACTATGTCTGTGGC
ACAGAACTGGACAATGGACCTGGTGAACAGAACAACAGAGGCCTACACAG
TTCTTGTTCGGAAGATAGAACAAGAGATGACACAAAAACTTCTGGTGAAC
GTTGGATTCCAGGGGCTTGAAGTGACTCAGTTTAAACAAACGGCGTCCAA
TCAGATCCTTGTGGTTGTGAGGATTGTAACAGCCGTGTACGCCCAGACAT
CGACACAGCAGACCTTCATCACCACAGTGCAGTCTGGCCGTGTAGGAACC
CTGTCTGTTGTCCGCACATCAGCGGCCATCAAAACGGACGTGACGACCTC
CCAGACTGCCCAGATGACCTTGATGCAAACATGGTCTGCTGACCTTCAAA
ACAGCACTAGTCAGACTTATGTGACCTTGCAGAAGCAAGTTGTCAATGCG
ATGAACATAGAGCTGGGAAACACTGTTGGCTTCCAACGAGTCGTTGTAAC
AAAGTTTACAAAAAGTTCCAACAACACCGTTATTACCGAAGTACGTATGA
TAACGGCGGCCTATGCAGTCAACGCTGTAGAAAACGTTTTTGTACAAGCA
GTTTCAACCGGACAGGTGCAAGGAATCACCGTAGATAAGGCATCTGCAAA
CATTGTCCGGGATGTAAGCGTATCTTCCCAAGTTGTTGGGACCCTAAGTC
TGAACTCAACATCAGCTACGATAACCACAGATGTGAGCGTGTCGTCTACG
ATGACTATGTCTGTGGCACAGAACTGGACAATGGACCTGGTGAACAGAAC
AACAGAGGCCTACACAGTTCTTGTTCGGAAGATAGAACAAGAGATGACAC
AAAAACTTCTGGTGAACGTTGGATTCCAGGGGCTTGAAGTGACTCAGTTT
AAACAAACGGCGTCCAATCAGATCCTTGTGGTTGTGAGGATTGTAACAGC
CGTGTACGCCCAGACATCGACACAGCAGACCTTCATCACCACAGTGCAGT
CTGGCCGTGTAGGAACCCTGTCTGTTGTCCGCACATCAGCGGCCATCAAA
ACGGACGTGACGACCTCCCAGACTGCCCAGATGACCTTGATGCAAACATG
GTCTGCTGACCTTCAAAACAGCACTAGTCAGACTTATGTGACCTTGCAGA
AGCAAGTTGTCAATGCGATGAACATAGAGCTGGGAAACACTGTTGGCTTC
CAACGAGTCGTTGTAACAAAGTTTACAAAAAGTTCCAACAACACCGTTAT
TACCGAAGTACGTATGATAACGGCGGCCTATGCAGTCAACGCTGTAGAAA
ACGTTTTTGTACAAGCAGTTTCAACCGGACAGGTGCAAGGAATCACCGTA
GATAAGGCATCTGCAAACATTGTCCGGGATGTAAGCGTATCTTCCCAAGT
TGTTGGGACCCTAAGTCTGAACTCAACATCAGCTACGATAACCACAGATG
TGAGCGTGTCGTCTACGATGACTATGTCTGTGGCACAGAACTGGACAATG
GACCTGGTGAACAGAACAACAGAGGCCTACACAGTTCTTGTTCGGAAGAT
AGAACAAGAGATGACACAAAAACTTCTGGTGAACGTTGGATTCCAGGGGC
TTGAAGTGACTCAGTTTAAACAAACGGCGTCCAATCAGATCCTTGTGGTT
GTGAGGATTGTAACAGCCGTGTACGCCCAGACATCGACACAGCAGACCTT
CATCACCACAGTGCAGTCTGGCCGTGTAGGAACCCTGTCTGTTGTCCGCA
CATCAGCGGCCATCAAAACGGACGTGACGACCTCCCAGACTGCCCAGATG
ACCTTGATGCAAACATGGTCTGCTGACCTTCAAAACAGCACTAGTCAGAC
TTATGTGACCTTGCAGAAGCAAGTTGTCAATGCGATGAACATAGAGCTGG
GAAACACTGTTGGCTTCCAACGAGTCGTTGTAACAAAGTTTACAAAAAGT
TCCAACAACACCGTTATTACCGAAGTACGTATGATAACGGCGGCCTATGC
AGTCAACGCTGTAGAAAACGTTTTTGTACAAGCAGTTTCAACCGGACAGG
TGCAAGGAATCACCGTAGATAAGGCATCTGCAAACATTGTCCGGGATGTA
AGCGTATCTTCCCAAGTTGTTGGGACCCTAAGTCTGAACTCAACATCAGC
TACGATAACCACAGATGTGAGCGTGTCGTCTACGATGACTATGTCTGTGG
CACAGAACTGGACAATGGACCTGGTGAACAGAACAACAGAGGCCTACACA
GTTCTTGTTCGGAAGATAGAACAAGAGATGACACAAAAACTTCTGGTGAA
CGTTGGATTCCAGGGGCTTGAAGTGACTCAGTTTAAACAAACGGCGTCCA
ATCAGATCCTTGTGGTTGTGAGGATTGTAACAGCCGTGTACGCCCAGACA
TCGACACAGCAGACCTTCATCACCACAGTGCAGTCTGGCCGTGTAGGAAC
CCTGTCTGTTGTCCGCACATCAGCGGCCATCAAAACGGACGTGACGACCT
CCCAGACTGCCCAGATGACCTTGATGCAAACATGGTCTGCTGACCTTCAA
AACAGCACTAGTCAGACTTATGTGACCTTGCAGAAGCAAGTTGTCAATGC
GATGAACATAGAGCTGGGAAACACTGTTGGCTTCCAACGAGTCGTTGTAA
CAAAGTTTACAAAAAGTTCCAACAACACCGTTATTACCGAAGTACGTATG
ATAACGGCGGCCTATGCAGTCAACGCTGTAGAAAACGTTTTTGTACAAGC
AGTTTCAACCGGACAGGTGCAAGGAATCACCGTAGATAAGGCATCTGCAA
ACATTGTCCGGGATGTAAGCGTATCTTCCCAAGTTGTTGGGACCCTAAGT
CTGAACTCAACATCAGCTACGATAACCACAGATGTGAGCGTGTCGTCTAC
GATGACTATGTCTGTGGCACAGAACTGGACAATGGACCTGGTGAACAGAA
CAACAGAGGCCTACACAGTTCTTGTTCGGAAGATAGAACAAGAGATGACA
CAAAAACTTCTGGTGAACGTTGGATTCCAGGGGCTTGAAGTGACTCAGTT
TAAACAAACGGCGTCCAATCAGATCCTTGTGGTTGTGAGGATTGTAACAG
CCGTGTACGCCCAGACATCGACACAGCAGACCTTCATCACCACAGTGCAG
TCTGGCCGTGTAGGAACCCTGTCTGTTGTCCGCACATCAGCGGCCATCAA
AACGGACGTGACGACCTCCCAGACTGCCCAGATGACCTTGATGCAAACAT
GGTCTGCTGACCTTCAAAACAGCACTAGTCAGACTTATGTGACCTTGCAG
AAGCAAGTTGTCAATGCGATGAACATAGAGCTGGGAAACACTGTTGGCTT
CCAACGAGTCGTTGTAACAAAGTTTACAAAAAGTTCCAACAACACCGTTA
TTACCGAAGTACGTATGATAACGGCGGCCTATGCAGTCAACGCTGTAGAA
AACGTTTTTGTACAAGCAGTTTCAACCGGACAGGTGCAAGGAATCACCGT
AGATAAGGCATCTGCAAACATTGTCCGGGATGTAAGCGTATCTTCCCAAG
TTGTTGGGACCCTAAGTCTGAACTCAACATCAGCTACGATAACCACAGAT
GTGAGCGTGTCGTCTACGATGACTATGTCTGTGGCACAGAACTGGACAAT
GGACCTGGTGAACAGAACAACAGAGGCCTACACAGTTCTTGTTCGGAAGA
TAGAACAAGAGATGACACAAAAACTTCTGGTGAACGTTGGATTCCAGGGG
CTTGAAGTGACTCAGTTTAAACAAACGGCGTCCAATCAGATCCTTGTGGT
TGTGAGGATTGTAACAGCCGTGTACGCCCAGACATCGACACAGCAGACCT
TCATCACCACAGTGCAGTCTGGCCGTGTAGGAACCCTGTCTGTTGTCCGC
ACATCAGCGGCCATCAAAACGGACGTGACGACCTCCCAGACTGCCCAGAT
GACCTTGATGCAAACATGGTCTGCTGACCTTCAAAACAGCACTAGTCAGA
CTTATGTGACCTTGCAGAAGCAAGTTGTCAATGCGATGAACATAGAGCTG
GGAAACACTGTTGGCTTCCAACGAGTCGTTGTAACAAAGTTTACAAAAAG
TTCCAACAACACCGTTATTACCGAAGTACGTATGATAACGGCGGCCTATG
CAGTCAACGCTGTAGAAAACGTTTTTGTACAAGCAGTTTCAACCGGACAG
GTGCAAGGAATCACCGTAGATAAGGCATCTGCAAACATTGTCCGGGATGT
AAGCGTATCTTCCCAAGTTGTTGGGACCCTAAGTCTGAACTCAACATCAG
CTACGATAACCACAGATGTGAGCGTGTCGTCTACGATGACTATGTCTGTG
GCACAGAACTGGACAATGGACCTGGTGAACAGAACAACAGAGGCCTACAC
AGTTCTTGTTCGGAAGATAGAACAAGAGATGACACAAAAACTTCTGGTGA
ACGTTGGATTCCAGGGGCTTGAAGTGACTCAGTTTAAACAAACGGCGTCC
AATCAGATCCTTGTGGTTGTGAGGATTGTAACAGCCGTGTACGCCCAGAC
ATCGACACAGCAGACCTTCATCACCACAGTGCAGTCTGGCCGTGTAGGAA
CCCTGTCTGTTGTCCGCACATCAGCGGCCATCAAAACGGACGTGACGACC
TCCCAGACTGCCCAGATGACCTTGATGCAAACATGGTCTGCTGACCTTCA
AAACAGCACTAGTCAGACTTATGTGACCTTGCAGAAGCAAGTTGTCAATG
CGATGAACATAGAGCTGGGAAACACTGTTGGCTTCCAACGAGTCGTTGTA
ACAAAGTTTACAAAAAGTTCCAACAACACCGTTATTACCGAAGTACGTAT
GATAACGGCGGCCTATGCAGTCAACGCTGTAGAAAACGTTTTTGTACAAG
CAGTTTCAACCGGACAGGTGCAAGGAATCACCGTAGATAAGGCATCTGCA
AACATTGTCCGGGATGTAAGCGTATCTTCCCAAGTT
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| Sc0000025 | genome | Sc0000025:1363298..1366477 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL97016_cuf10 |
| Biotype | protein_coding |
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