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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96987_cuf8 >transcript:BL96987_cuf8-protein ID=transcript:BL96987_cuf8-protein|Name=transcript:BL96987_cuf8|organism=Branchiostoma lanceolatum|type=polypeptide|length=105bp
NGGTCTDGVDSHSCQCAAGFGGVNCETNIDECEPDPCQNGATCTDGTGTY
TCECAPGFEGVNCETNIDDCILGPCLNGGDCIDGVDSYTCQCSVGFMGEN
CETSR Run BLAST on NCBI mRNA from alignment at Sc0000004:3647815..3649780+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96987_cuf8 ID=transcript:BL96987_cuf8|Name=transcript:BL96987_cuf8|organism=Branchiostoma lanceolatum|type=mRNA|length=1966bp|location=Sequence derived from alignment at Sc0000004:3647815..3649780+ (Branchiostoma lanceolatum)
AATGGGGGTACCTGCACTGACGGCGTGGATTCACACTCTTGTCAATGTGC
AGCAGGATTCGGAGGCGTCAACTGTGAAACAAGTACGTGGTATTTTGCAA
TTTCTCTCATTAGTATACAGAATATACATATCAAACAACGTCTACAGAAA
AATGATTTAAAAGGTCTACCAAAATTTCGATGATCATTCAGGTGCCTACC
AGGGATGGCAACCAGGGAAACACCAGAATAGAAAACATCACATCTACCGA
GGCACTACTCTCCCTTCGGCAGCATACGGATCTGAGTGTGTGACTGAATT
AAAAACAAATTGTATTTTATATGTTGATATATCTTTGTATTCGATCCAGA
CATTGACGAATGTGAGCCTGACCCTTGTCAGAACGGAGCTACATGTACCG
ATGGTACCGGTACGTACACGTGTGAGTGCGCACCAGGGTTTGAAGGCGTC
AACTGTGAAACAAGTACGTGCCGTGATTTCCTTTTTAAATCTTACAACGC
ACGAATGATATATGAAAATCAATAGCAACTAGAAAGGCAACATTTGCGAG
CAAATACAGCATGTTTAGCCATACTTCTCGCCATGCAAAAAATGGACTCT
CCCAAAATAACAATGGACCATTCTAAAATACTTGCACTAAAAAAATGAAT
CACCCCAGTCCAAAATTGAGTCTTCCAGTAGCACCTCAACACAATATGGA
CCAGTCCACAACCATATCCACTTATTGATTAACAAATACACTTCTGCTAA
CAAATGGACTTTTTCATAATCATTCCAGCTCAAAATTGAAAGAAATAATT
AAAGAATCCTCCCCTTGCAAGAATGGGATATTCCGTGCCATTTCCATGTA
AACCAGTCGAAAAATATCCGCTGAAAATTACACTCTTGCGCATAATCAAC
CCAGTTCAAAATTGANCCATGTAATCACATGTCCTAGGAATTCCCATACC
ATATTTGGCATGAATACTAGCACACCTGCGCCAGGAATGCAAGATAATTA
GATTAACCCAATTGACCAATCAGGTGGTCGCAAGGCTCACAGGCATGCAA
GGCCAGGTGCAAGGCACTTGGGGTCAATGACCTGTAGGTCATATGTAGTA
TTGAAAGTGACAGAAGTGGCAAATATTGTCAAGAAAGCCCAAAATAAATC
GTTTTGAATATATGTATGCCAAAAATGGGAATGTAGTCCTTTAAATATTT
GTTCAAGCCACATATACAGCAAATTTCAGGTCATTCGGTTGAAATACCAG
GGCGCAGGAGGCCAAGATATGCTAAAAATAGCCTAAAAACCTCAATAAAA
TCACTTTCAAGGTCAATATCAAAAAAAGGAAAAGAACGCACATTGGTTTT
TGCCTACATTACCTCTGTACCAAATTTCAGGTCATTTGGTCAAAAAATGA
CAGAGATGAATCGATTTGAAGATTTGACAGGAGGAGAAGAAGAAGAAGAA
GAAGAAGAAGAAGAAACATGAGTAAAAACAATATGTTTAGCCATACTAGG
TATGGCTAAACATAACAAGTTACTCCTATATGCTAGTAAGACCATGGAAA
TGCCATAGAAAATTATAATTTCGGAAATAGATATTTCAATGATTTATGTA
TACCTTTTATCGAATAGCGTTTGCCTGAAATAATTTTTATTCAACTTCGG
TATTTTAATGCGGAGTTGTGGTCTGTTTCTTTGCTACCCAGATATAGATG
ATTGTATCCTTGGACCTTGCCTCAACGGAGGTGACTGTATCGACGGTGTG
GATTCTTACACGTGCCAGTGTTCAGTTGGATTTATGGGGGAAAACTGTGA
AACAAGTAGGTGACTTTTTGTACCGACAAATTTACCTTCCAAGAGCATAC
AAAGCCTACGTCAAAGAAAACATAGTGCCATGGTCTCATTGTACTTCATA
TATCAACGCAGGACGAGTAACGAAAGAAAGATAACTTAAAGTCAGTTTTT
CACAATATGAATTTAC Coding sequence (CDS) from alignment at Sc0000004:3647815..3649780+ >transcript:BL96987_cuf8 ID=transcript:BL96987_cuf8|Name=transcript:BL96987_cuf8|organism=Branchiostoma lanceolatum|type=CDS|length=954bp|location=Sequence derived from alignment at Sc0000004:3647815..3649780+ (Branchiostoma lanceolatum)
AATGGGGGTACCTGCACTGACGGCGTGGATTCACACTCTTGTCAATGTGC
AGCAGGATTCGGAGGCGTCAACTGTGAAACAAACATTGACGAATGTGAGC
CTGACCCTTGTCAGAACGGAGCTACATGTACCGATGGTACCGGTACGTAC
ACGTGTGAGTGCGCACCAGGGTTTGAAGGCGTCAACTGTGAAACAAATAT
AGATGATTGTATCCTTGGACCTTGCCTCAACGGAGGTGACTGTATCGACG
GTGTGGATTCTTACACGTGCCAGTGTTCAGTTGGATTTATGGGGGAAAAC
TGTGAAACAAGTAGGTGAAATGGGGGTACCTGCACTGACGGCGTGGATTC
ACACTCTTGTCAATGTGCAGCAGGATTCGGAGGCGTCAACTGTGAAACAA
ACATTGACGAATGTGAGCCTGACCCTTGTCAGAACGGAGCTACATGTACC
GATGGTACCGGTACGTACACGTGTGAGTGCGCACCAGGGTTTGAAGGCGT
CAACTGTGAAACAAATATAGATGATTGTATCCTTGGACCTTGCCTCAACG
GAGGTGACTGTATCGACGGTGTGGATTCTTACACGTGCCAGTGTTCAGTT
GGATTTATGGGGGAAAACTGTGAAACAAGTAGGTGAAATGGGGGTACCTG
CACTGACGGCGTGGATTCACACTCTTGTCAATGTGCAGCAGGATTCGGAG
GCGTCAACTGTGAAACAAACATTGACGAATGTGAGCCTGACCCTTGTCAG
AACGGAGCTACATGTACCGATGGTACCGGTACGTACACGTGTGAGTGCGC
ACCAGGGTTTGAAGGCGTCAACTGTGAAACAAATATAGATGATTGTATCC
TTGGACCTTGCCTCAACGGAGGTGACTGTATCGACGGTGTGGATTCTTAC
ACGTGCCAGTGTTCAGTTGGATTTATGGGGGAAAACTGTGAAACAAGTAG
GTGA
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000004 | genome | Sc0000004:3647815..3649780 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96987_cuf8 |
| Biotype | protein_coding |
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