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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96986_cuf7 >transcript:BL96986_cuf7-protein ID=transcript:BL96986_cuf7-protein|Name=transcript:BL96986_cuf7|organism=Branchiostoma lanceolatum|type=polypeptide|length=240bp
NDYTCECEAGYVGDLCETDVDECASNPCLNDGECIDGVNSFQCECVAGFE
GVLCETNFDDCAPHPCLNDAVCVDEVDSYRCICLDGFNGDWCEENIDDCF
SDPCQNGGTCVDGILSFSCDCAPGYTGDVCDIEIDECESSPCQNGGECTD
AVAMFICDCATGYEGVACETNIDDCASTPCHNGANCTDGLDEYSCTCASG
FVGTHCETNVDDCQPDPCQNGGTCIDGVDSHTCDCAAGYA Run BLAST on NCBI mRNA from alignment at Sc0000004:3642368..3645531+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96986_cuf7 ID=transcript:BL96986_cuf7|Name=transcript:BL96986_cuf7|organism=Branchiostoma lanceolatum|type=mRNA|length=3164bp|location=Sequence derived from alignment at Sc0000004:3642368..3645531+ (Branchiostoma lanceolatum)
AATGATTACACCTGTGAATGTGAAGCTGGATATGTCGGTGACCTGTGTGA
AACAGGTAAGCTACATTTAAATCAATTCATTTCTTTTTTATTAGCCAGAC
TGAATCGAGTTTATAGCAGCCCTTCCAGGGTCTGGTCAGGTTCCTAGAAT
CCTGATGGCCAAGATTTATCTACCTATTTATCTATCTATCTTTGTATTTA
TTTATTTACTTATGTAATTGTCTTCATCATCCAGATGTTGACGAGTGCGC
TTCCAACCCATGTCTCAACGACGGTGAATGCATTGACGGTGTGAACTCAT
TTCAATGCGAGTGTGTTGCCGGATTTGAGGGAGTTCTCTGTGAAACAAGT
ATGTGCATTTTTTCTTCAATCTCTTATAACCTCCTTTTTTTTTTACAAAG
ATAAGCAAAACGCACACCTACATTTTTTACATTTGTTTTCTGATTCATAT
TTTTATCTAGATTTTGACGACTGTGCACCGCATCCCTGCCTGAATGACGC
TGTATGTGTCGACGAAGTGGACTCTTACCGATGTATCTGTCTGGATGGAT
TCAACGGGGACTGGTGTGAAGAAAGTAAGATACTTTGATATCCCTATATA
TACGGACCCCTGGCAGATCCGTCGTACGGTCGTCGTAAGATGGCAAATTA
AACTCGGGGGGGGGGGGTTATCTTGAGATAGTCCTACAGTTGTCACTAAA
AATCATCTGTCATTTTAAAGAAAATGCTTTTGGTTCTGTCGGAGCCTGCT
TGAAACGCTCTACTAAATCAATTGGTCGTAGCGTGGGGTCGTGTGGCGTA
ACGGCAGGGTTTTCGGCCCAGAACCCAAGGGTTCGAATCCCCTGACGCCA
CCGATCTTGTGTCCTTGGGAAAAAGACACTTAACACGATTTTCCCCACTC
CAGCCAAGTGTAAAAAACGGCTACATTATGTGTGCGGGTCACGACATCAG
CAATAGCTGCCTGTGTTCCACGTGTATTGCACTGTTGCAATTCCAATGAA
ATAAAAAATCCAAATAGGCTGAAGCCGAACGGCCCACTTTCATTGTAATC
CATCATTTCATTATTACAGCGAACAGTAAACCATTGCCATCTATCATCTG
TATAACGTGGTTGTGACACTAAAGCTAACTCATGTAACATCGCGTTCAAA
CAATATCTATCCTGTAATATGATTAACGGAGGCAGGAATCCGGAGCCGGA
AGTATATCTGTAATGGGGTTTTCTTGAAATTCTTCGTCTAACAGAAGACG
CAAACGTGAAATTGACCTACTAACTGTTGATGTAATACCACAACTGCTGT
AGGGCGAAAGCAGACAATGCTGCACTTAAGTGTCATAAGAACTTATATAA
TTATATGATGTATATCTATTACATCTGCTTTATCTATGAATCNTTTATCC
ATGAATCCAGATATCGACGACTGTTTCTCCGATCCTTGTCAAAATGGCGG
CACGTGCGTTGATGGCATACTTTCGTTCTCCTGCGACTGCGCACCAGGGT
ATACTGGGGACGTGTGTGACATAGGTAGGTGATCCGCTTTCTTAAAGAAA
ACATTAAGAAAGTTAAAGATCGTATTGAATTATTGTCAATATCCATAGAG
ACTGACCGCCATGCTGATTCCCTTCATGAGCATTTCAATCGGTTTTAAGC
TTCTCTACATCCTTTCAGCATTTTTTATCAATCATACATACTTCAAATAG
TTTTCGTAGTGTCAAAATATGTCTCAGTGTCGGAAAATGCCTGAGGTACT
ATTTACTATCAATATAATGGAAATGACCGCCTCCATGTTAGTGTCCATAT
GCCGTCATTTGAAGAGACACCCTTTGTGTGCGACGAGCTGATTTGAAAAA
CGTAAACGCATGTAATCTAGGAGAACATCTGTGGTATTTTGTTTTGAAAT
ACCGCGAAATGCATTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAG
TCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCAGTCATTCAGTCATTC
ATAAATGCATGCATGTTTCTTGATCTGATCTAATGCAGAGATCGACGAAT
GTGAGTCCAGCCCGTGTCAGAACGGCGGAGAGTGCACCGATGCTGTGGCT
ATGTTCATTTGTGATTGTGCCACAGGGTATGAAGGCGTTGCTTGTGAAAC
GAGTAAGTTCCTTACGTTTTTAACTCATGTCTATTTCATGTAAGAATGTC
GGGAGATCCATTTTGACCACCCGCAATTCGACCTCCAATTCCTGCCAGGC
TGTAGTGTCACCATTTCTCTGTCACTCTACTGTGTTCTAACAGCTACGGA
TACACAAACAAACAAACAGACACGTCGAAAACATACATAACGTCCGTGCA
AGGGAAGTGAATAGTACAACGTGAATTCCTACGACGTTGCCTTAGCCCCC
TTCACACTATTTTGTGTGTTTTGTTGTCTTGTGTTTTGTTGTATTGTTGG
TCATACTTGTACGTTTTGAATGATATTCCTATGATAAAGTCAATGGTAAC
ACGAATCCAGTTTAGGACGCAGTGACGCCGCCGGCGCGCCGCGGGTCCAG
TGAGAGGGGGGCTCTTCTAATGATTTGGGGCTACTGATAAACGATGACAG
TTTGAATTATGGTCTTAATTCTCAGATATAGACGACTGCGCCTCTACGCC
GTGCCACAACGGAGCTAACTGCACGGACGGGCTGGATGAGTACTCCTGTA
CCTGTGCGTCCGGATTCGTCGGTACCCACTGTGAAACAAGTAGGGGACAT
TTCTAACAATTTATCTTTTCTCAAACAATACAAGCAGCTGACGTCATAAC
AAGGCCAGGGTGTAAGCGGTGTCATGATTTCAATGGCGCACGCGCAGTGT
GACGCATTGTGGGTATCATGTAAAAGTTTAGGGCGTCTACAAACAAAATA
ATGTATAAAAACAGTATATTTACCTTGGAACTTAAATCTCAAACCACAAA
CATGCTTATTGTAGCTGAACCGTACCAACATCAATCTAAATGAAAAAGAA
TACGTTGATCAAGCTTAGACAAGAAAAGAATAGGCATGAAAATGTTGAAT
TTTCTCTTTTCTCCTCTAGATGTGGATGACTGTCAGCCTGACCCTTGTCA
GAATGGAGGCACATGTATCGACGGTGTGGATTCGCACACTTGTGATTGTG
CAGCAGGATACGCC Coding sequence (CDS) from alignment at Sc0000004:3642368..3645531+ >transcript:BL96986_cuf7 ID=transcript:BL96986_cuf7|Name=transcript:BL96986_cuf7|organism=Branchiostoma lanceolatum|type=CDS|length=5040bp|location=Sequence derived from alignment at Sc0000004:3642368..3645531+ (Branchiostoma lanceolatum)
AATGATTACACCTGTGAATGTGAAGCTGGATATGTCGGTGACCTGTGTGA
AACAGATGTTGACGAGTGCGCTTCCAACCCATGTCTCAACGACGGTGAAT
GCATTGACGGTGTGAACTCATTTCAATGCGAGTGTGTTGCCGGATTTGAG
GGAGTTCTCTGTGAAACAAATTTTGACGACTGTGCACCGCATCCCTGCCT
GAATGACGCTGTATGTGTCGACGAAGTGGACTCTTACCGATGTATCTGTC
TGGATGGATTCAACGGGGACTGGTGTGAAGAAAATATCGACGACTGTTTC
TCCGATCCTTGTCAAAATGGCGGCACGTGCGTTGATGGCATACTTTCGTT
CTCCTGCGACTGCGCACCAGGGTATACTGGGGACGTGTGTGACATAGAGA
TCGACGAATGTGAGTCCAGCCCGTGTCAGAACGGCGGAGAGTGCACCGAT
GCTGTGGCTATGTTCATTTGTGATTGTGCCACAGGGTATGAAGGCGTTGC
TTGTGAAACGAATATAGACGACTGCGCCTCTACGCCGTGCCACAACGGAG
CTAACTGCACGGACGGGCTGGATGAGTACTCCTGTACCTGTGCGTCCGGA
TTCGTCGGTACCCACTGTGAAACAAATGTGGATGACTGTCAGCCTGACCC
TTGTCAGAATGGAGGCACATGTATCGACGGTGTGGATTCGCACACTTGTG
ATTGTGCAGCAGGATACGCCAATGATTACACCTGTGAATGTGAAGCTGGA
TATGTCGGTGACCTGTGTGAAACAGATGTTGACGAGTGCGCTTCCAACCC
ATGTCTCAACGACGGTGAATGCATTGACGGTGTGAACTCATTTCAATGCG
AGTGTGTTGCCGGATTTGAGGGAGTTCTCTGTGAAACAAATTTTGACGAC
TGTGCACCGCATCCCTGCCTGAATGACGCTGTATGTGTCGACGAAGTGGA
CTCTTACCGATGTATCTGTCTGGATGGATTCAACGGGGACTGGTGTGAAG
AAAATATCGACGACTGTTTCTCCGATCCTTGTCAAAATGGCGGCACGTGC
GTTGATGGCATACTTTCGTTCTCCTGCGACTGCGCACCAGGGTATACTGG
GGACGTGTGTGACATAGAGATCGACGAATGTGAGTCCAGCCCGTGTCAGA
ACGGCGGAGAGTGCACCGATGCTGTGGCTATGTTCATTTGTGATTGTGCC
ACAGGGTATGAAGGCGTTGCTTGTGAAACGAATATAGACGACTGCGCCTC
TACGCCGTGCCACAACGGAGCTAACTGCACGGACGGGCTGGATGAGTACT
CCTGTACCTGTGCGTCCGGATTCGTCGGTACCCACTGTGAAACAAATGTG
GATGACTGTCAGCCTGACCCTTGTCAGAATGGAGGCACATGTATCGACGG
TGTGGATTCGCACACTTGTGATTGTGCAGCAGGATACGCCAATGATTACA
CCTGTGAATGTGAAGCTGGATATGTCGGTGACCTGTGTGAAACAGATGTT
GACGAGTGCGCTTCCAACCCATGTCTCAACGACGGTGAATGCATTGACGG
TGTGAACTCATTTCAATGCGAGTGTGTTGCCGGATTTGAGGGAGTTCTCT
GTGAAACAAATTTTGACGACTGTGCACCGCATCCCTGCCTGAATGACGCT
GTATGTGTCGACGAAGTGGACTCTTACCGATGTATCTGTCTGGATGGATT
CAACGGGGACTGGTGTGAAGAAAATATCGACGACTGTTTCTCCGATCCTT
GTCAAAATGGCGGCACGTGCGTTGATGGCATACTTTCGTTCTCCTGCGAC
TGCGCACCAGGGTATACTGGGGACGTGTGTGACATAGAGATCGACGAATG
TGAGTCCAGCCCGTGTCAGAACGGCGGAGAGTGCACCGATGCTGTGGCTA
TGTTCATTTGTGATTGTGCCACAGGGTATGAAGGCGTTGCTTGTGAAACG
AATATAGACGACTGCGCCTCTACGCCGTGCCACAACGGAGCTAACTGCAC
GGACGGGCTGGATGAGTACTCCTGTACCTGTGCGTCCGGATTCGTCGGTA
CCCACTGTGAAACAAATGTGGATGACTGTCAGCCTGACCCTTGTCAGAAT
GGAGGCACATGTATCGACGGTGTGGATTCGCACACTTGTGATTGTGCAGC
AGGATACGCCAATGATTACACCTGTGAATGTGAAGCTGGATATGTCGGTG
ACCTGTGTGAAACAGATGTTGACGAGTGCGCTTCCAACCCATGTCTCAAC
GACGGTGAATGCATTGACGGTGTGAACTCATTTCAATGCGAGTGTGTTGC
CGGATTTGAGGGAGTTCTCTGTGAAACAAATTTTGACGACTGTGCACCGC
ATCCCTGCCTGAATGACGCTGTATGTGTCGACGAAGTGGACTCTTACCGA
TGTATCTGTCTGGATGGATTCAACGGGGACTGGTGTGAAGAAAATATCGA
CGACTGTTTCTCCGATCCTTGTCAAAATGGCGGCACGTGCGTTGATGGCA
TACTTTCGTTCTCCTGCGACTGCGCACCAGGGTATACTGGGGACGTGTGT
GACATAGAGATCGACGAATGTGAGTCCAGCCCGTGTCAGAACGGCGGAGA
GTGCACCGATGCTGTGGCTATGTTCATTTGTGATTGTGCCACAGGGTATG
AAGGCGTTGCTTGTGAAACGAATATAGACGACTGCGCCTCTACGCCGTGC
CACAACGGAGCTAACTGCACGGACGGGCTGGATGAGTACTCCTGTACCTG
TGCGTCCGGATTCGTCGGTACCCACTGTGAAACAAATGTGGATGACTGTC
AGCCTGACCCTTGTCAGAATGGAGGCACATGTATCGACGGTGTGGATTCG
CACACTTGTGATTGTGCAGCAGGATACGCCAATGATTACACCTGTGAATG
TGAAGCTGGATATGTCGGTGACCTGTGTGAAACAGATGTTGACGAGTGCG
CTTCCAACCCATGTCTCAACGACGGTGAATGCATTGACGGTGTGAACTCA
TTTCAATGCGAGTGTGTTGCCGGATTTGAGGGAGTTCTCTGTGAAACAAA
TTTTGACGACTGTGCACCGCATCCCTGCCTGAATGACGCTGTATGTGTCG
ACGAAGTGGACTCTTACCGATGTATCTGTCTGGATGGATTCAACGGGGAC
TGGTGTGAAGAAAATATCGACGACTGTTTCTCCGATCCTTGTCAAAATGG
CGGCACGTGCGTTGATGGCATACTTTCGTTCTCCTGCGACTGCGCACCAG
GGTATACTGGGGACGTGTGTGACATAGAGATCGACGAATGTGAGTCCAGC
CCGTGTCAGAACGGCGGAGAGTGCACCGATGCTGTGGCTATGTTCATTTG
TGATTGTGCCACAGGGTATGAAGGCGTTGCTTGTGAAACGAATATAGACG
ACTGCGCCTCTACGCCGTGCCACAACGGAGCTAACTGCACGGACGGGCTG
GATGAGTACTCCTGTACCTGTGCGTCCGGATTCGTCGGTACCCACTGTGA
AACAAATGTGGATGACTGTCAGCCTGACCCTTGTCAGAATGGAGGCACAT
GTATCGACGGTGTGGATTCGCACACTTGTGATTGTGCAGCAGGATACGCC
AATGATTACACCTGTGAATGTGAAGCTGGATATGTCGGTGACCTGTGTGA
AACAGATGTTGACGAGTGCGCTTCCAACCCATGTCTCAACGACGGTGAAT
GCATTGACGGTGTGAACTCATTTCAATGCGAGTGTGTTGCCGGATTTGAG
GGAGTTCTCTGTGAAACAAATTTTGACGACTGTGCACCGCATCCCTGCCT
GAATGACGCTGTATGTGTCGACGAAGTGGACTCTTACCGATGTATCTGTC
TGGATGGATTCAACGGGGACTGGTGTGAAGAAAATATCGACGACTGTTTC
TCCGATCCTTGTCAAAATGGCGGCACGTGCGTTGATGGCATACTTTCGTT
CTCCTGCGACTGCGCACCAGGGTATACTGGGGACGTGTGTGACATAGAGA
TCGACGAATGTGAGTCCAGCCCGTGTCAGAACGGCGGAGAGTGCACCGAT
GCTGTGGCTATGTTCATTTGTGATTGTGCCACAGGGTATGAAGGCGTTGC
TTGTGAAACGAATATAGACGACTGCGCCTCTACGCCGTGCCACAACGGAG
CTAACTGCACGGACGGGCTGGATGAGTACTCCTGTACCTGTGCGTCCGGA
TTCGTCGGTACCCACTGTGAAACAAATGTGGATGACTGTCAGCCTGACCC
TTGTCAGAATGGAGGCACATGTATCGACGGTGTGGATTCGCACACTTGTG
ATTGTGCAGCAGGATACGCCAATGATTACACCTGTGAATGTGAAGCTGGA
TATGTCGGTGACCTGTGTGAAACAGATGTTGACGAGTGCGCTTCCAACCC
ATGTCTCAACGACGGTGAATGCATTGACGGTGTGAACTCATTTCAATGCG
AGTGTGTTGCCGGATTTGAGGGAGTTCTCTGTGAAACAAATTTTGACGAC
TGTGCACCGCATCCCTGCCTGAATGACGCTGTATGTGTCGACGAAGTGGA
CTCTTACCGATGTATCTGTCTGGATGGATTCAACGGGGACTGGTGTGAAG
AAAATATCGACGACTGTTTCTCCGATCCTTGTCAAAATGGCGGCACGTGC
GTTGATGGCATACTTTCGTTCTCCTGCGACTGCGCACCAGGGTATACTGG
GGACGTGTGTGACATAGAGATCGACGAATGTGAGTCCAGCCCGTGTCAGA
ACGGCGGAGAGTGCACCGATGCTGTGGCTATGTTCATTTGTGATTGTGCC
ACAGGGTATGAAGGCGTTGCTTGTGAAACGAATATAGACGACTGCGCCTC
TACGCCGTGCCACAACGGAGCTAACTGCACGGACGGGCTGGATGAGTACT
CCTGTACCTGTGCGTCCGGATTCGTCGGTACCCACTGTGAAACAAATGTG
GATGACTGTCAGCCTGACCCTTGTCAGAATGGAGGCACATGTATCGACGG
TGTGGATTCGCACACTTGTGATTGTGCAGCAGGATACGCC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000004 | genome | Sc0000004:3642368..3645531 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96986_cuf7 |
| Biotype | protein_coding |
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