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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96983_cuf4 >transcript:BL96983_cuf4-protein ID=transcript:BL96983_cuf4-protein|Name=transcript:BL96983_cuf4|organism=Branchiostoma lanceolatum|type=polypeptide|length=267bp
YVDVHGYSISVVGRTIQVDGINHTPPAILGDGEVKIFLSGRFIVVQADFG
LEASFDGQHYVKVFVPGSFAGLTRGLCGILNGNPWDDSLTSGNTLARDWN
AFGNSWLVSQSSCPENMILHPSPSCDAIRDTVEGPTACGLLTLPDGPFRS
CHNVIDPTKYYDDCVFDMCHWQGVRGLCETLETYADICKDEGVPPILWRT
PDLCPLECPQYSRYSPCTSGCPATCSDPEGPRGCDRPCAEGCACLPGYIR
SGEECVPADECGCSENG Run BLAST on NCBI mRNA from alignment at Sc0000004:3629938..3633175+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96983_cuf4 ID=transcript:BL96983_cuf4|Name=transcript:BL96983_cuf4|organism=Branchiostoma lanceolatum|type=mRNA|length=3238bp|location=Sequence derived from alignment at Sc0000004:3629938..3633175+ (Branchiostoma lanceolatum)
TACGTGGATGTACACGGGTACAGCATCTCAGTCGTAGGCAGGACGATTCA
GGTGAGACATAGGCATTTGATAGACGCTATTTATCTTTTAAATCACTATA
TACGATAGTTTTTGATACTAATATGTACATGTACATGTATCTAGTATATC
GTTTTAGCTCGTTATGCTAGCGCTGTCCATTGCAATGTCTTGTCTTTGTC
AGCAGGGCCCACTGTAATAGCCGCAGGCAAGTTGGGCAGCCCTGGCTGTG
TGTCAAAACAGCCTAACCAATAAATAAATATTTATGAAATAAAGGAAGGT
TGGTGTGAAACGTCGTTTGGTGTAATGTGAATTTGGCGCCGCGTTCCTGC
GAAACTGGTGTGTTATGTCGAAGGCTGTAAAACTGGCTATATAGATACAG
ATGCAGCTCTTGCAGTCAGAGATAACATATGGTAAGCGTGTTCACCGATT
AAAATATGCATGCCCTGTCAAATAGACTGTTGGTAATGTCACAAAAGTAA
AGGATCTCGAGACAAATGCAAGACACGTTTTAACATGTATAGATAATGGT
CTGGGCAACAAATGTCAACGGCCTTGGTTATTTAGTTTCCTGCAGTCTTC
AATTTCCTGTTGTATGCATGTACACATGTATGTTGCCTTATGATAGCCAT
TACACAAAGTCATCGAGGAATCACAATAATGATAGAGCATGAGATTCATA
TTAAAAAAAAACATTATTTCTTATTCGCAGGTTGACGGCATTAACCACAC
TCCCCCTGCTATTCTTGGCGATGGAGAGGTGAAGATCTTCCTCTCTGGTC
GTTTCATCGTGGTGCAAGCCGACTTCGGGTTAGAGGCGTCCTTTGACGGG
CAGCATTACGTAAAGGTAAACAAAGTCTGCTCTATCCGTCTTCGTTCTGT
TTCTTCTTTCCAGGGGTAAAGAAGAAGCTGCTATAGTGTGTACAGTTTTT
AAGAAGATGAACAAATTGGCATGGGGTAGTTATATAAATGTACTCATGCA
TTTCACCAGCAAAATAATGCAGAGAAATTCCAACGACGGTCGGAACCTGT
AACTCGACGCGTTCTTCTTTCCACTGGTTGCCCTTAACTCTGCACTTACA
TAATCCTTCCTCCGAACATTTTGTGCTGAGTATATGTATGTATTTCACTC
AACATGGCAACACTATAAAAGCTTGCCTTGATCAGAGAATTGGCGTGGTC
TACAGGTGATGGATTCTCCTGTCGGTTTGACAGATGAGTAGGCATACAAG
TCATTTGCCTCGTGTGAGAGTAATTACCTATTTTTGACGCACTTTGGTAG
CCGGCCACAGATGCTGTACGGGATGGAACAGTCTAGGATAGAGCGCTGCC
TCCTCTCCTCCTTCTTCTCCTGTTGATTTGATTCATTCGGCTGTAAAAAG
TACAGCCAGGGCTACCCAACTAGTCAAAGGCTATTACAAAGGGTTAGCCC
TGGTAACAGTATTCAATACAAACGCTCACAGAGTTCATTACAAACGTTCA
CAAAGCACGCCAAACAGATACATAAAACGCCAAGCTTAAAACATTATAGA
TAGAAGAAACAAATTTAACAAAAAAAATGCCACAAAAACTGAAACGCCTA
CGGTTATCAATGCACGAGACTAAATGATATATAAAACCATTGGCTTCTTG
TATGTAGATCTAGCATAAATGTACCTGTTTTCTGCAGGTGTTCGTTCCCG
GGTCCTTCGCCGGACTCACCCGGGGTCTCTGCGGCATCCTGAACGGAAAC
CCATGGGACGACTCCCTCACATCCGGAAACACGCTCGCCAGGGACTGGAA
TGCGTTTGGGAATAGCTGGTTGGTCAGCCAATCAAGGTAGGTAAAGTTGC
TGACAAAATTTAACATTTCTTTCCTTTCCTTTGAAATGGAATTGTATGTA
AGATGAAGTCCATCACACACTTTTGGGTCTTTATCTAAAGGCGGTGGACA
TTTCCACTTTTATGGCCCTTGAGCCAGACAGGTCCACTACAGTAGGGAGC
TAGTCTACTGGTCGAATCCAATACCCTTATACTTGCCCGGGTACAGAGTT
GGACGGGGTGGCGGTAAACGATGTAACCTGATACTTATAAAATGGGAACG
CAGGCTTGGCCCGTGTCCAAAGTCCCACGGGAAGGCCGGACACGCTAAAA
TTTCCCAGAGGTATGAGATCTTTGATTTCTTTTCACCCTTTTCTAGCTGT
CCCGAAAACATGATACTCCACCCGAGTCCGAGCTGTGACGCCATCCGTGA
CACCGTGGAGGGCCCGACAGCCTGCGGGCTGCTGACCCTCCCGGACGGGC
CGTTCAGATCCTGCCACAACGTCATCGACCCGACGAAGTACTACGACGAC
TGCGTGTTCGACATGTGTCATTGGCAAGGCGTGAGGGGACTCTGTGAGAC
TTTGGAGACGTACGCTGATATTTGTAAGGATGAAGGCGTCCCTCCAATTC
TATGGAGAACCCCGGACCTTTGTCGTAAGTTTACATCATTCCGATGTCAG
GATAGAGATTCTTCAAATCGGCCATTCTGTAGGTAGAGATCCCGATTGGA
ATCTGTAGACTTGAATCAAAGAAATTTCAAAGATATTCTGAACTTTTCGA
CTTCAGACTCCTGTCACTTAAGATCAATGGATTATTGACTTGAATATCTA
ATTATAAAATAGGAAACCACTCTACAACACCCCCAGCATCTCTGTTGTTG
ACAACGACTCCGATTGGAATTTATGTCGTTCCCATCTGTATCTTATGCTA
GGGTCACATTTCCAACCCGGGGCCCGGCCGGGCAGCTTGTGGGAACGAAA
ACTATGACATAAAAGACAACAAAACACACAAAACTTTTGAAAAATTATTC
CTTACACTACGTTATGTATATCCTTGACATGCGTCTTTTATTCTTTGTTT
TCTCAAACAGCCCGGCAGGGCCCCGGCTTTGAAATGTGACCGAAGCATTA
GTAGCGTGTTTGTCTTAATTCATCTACACATGGCTATCCATGGGCAAATA
TGGCTAGATACAAGTCACATACATTTCTCTTTTGTGCCCTTTCTCCGTAG
CTTTGGAATGTCCCCAGTACAGCCGGTACTCCCCCTGCACCAGCGGCTGC
CCTGCCACCTGCTCCGATCCCGAGGGCCCGAGGGGCTGCGACCGCCCATG
CGCAGAAGGCTGTGCGTGCCTGCCGGGATATATCAGGAGCGGGGAGGAGT
GCGTCCCTGCCGACGAGTGCGGATGCAGCGAGAACGGG Coding sequence (CDS) from alignment at Sc0000004:3629938..3633175+ >transcript:BL96983_cuf4 ID=transcript:BL96983_cuf4|Name=transcript:BL96983_cuf4|organism=Branchiostoma lanceolatum|type=CDS|length=4005bp|location=Sequence derived from alignment at Sc0000004:3629938..3633175+ (Branchiostoma lanceolatum)
TACGTGGATGTACACGGGTACAGCATCTCAGTCGTAGGCAGGACGATTCA
GGTTGACGGCATTAACCACACTCCCCCTGCTATTCTTGGCGATGGAGAGG
TGAAGATCTTCCTCTCTGGTCGTTTCATCGTGGTGCAAGCCGACTTCGGG
TTAGAGGCGTCCTTTGACGGGCAGCATTACGTAAAGGTGTTCGTTCCCGG
GTCCTTCGCCGGACTCACCCGGGGTCTCTGCGGCATCCTGAACGGAAACC
CATGGGACGACTCCCTCACATCCGGAAACACGCTCGCCAGGGACTGGAAT
GCGTTTGGGAATAGCTGGTTGGTCAGCCAATCAAGCTGTCCCGAAAACAT
GATACTCCACCCGAGTCCGAGCTGTGACGCCATCCGTGACACCGTGGAGG
GCCCGACAGCCTGCGGGCTGCTGACCCTCCCGGACGGGCCGTTCAGATCC
TGCCACAACGTCATCGACCCGACGAAGTACTACGACGACTGCGTGTTCGA
CATGTGTCATTGGCAAGGCGTGAGGGGACTCTGTGAGACTTTGGAGACGT
ACGCTGATATTTGTAAGGATGAAGGCGTCCCTCCAATTCTATGGAGAACC
CCGGACCTTTGTCCTTTGGAATGTCCCCAGTACAGCCGGTACTCCCCCTG
CACCAGCGGCTGCCCTGCCACCTGCTCCGATCCCGAGGGCCCGAGGGGCT
GCGACCGCCCATGCGCAGAAGGCTGTGCGTGCCTGCCGGGATATATCAGG
AGCGGGGAGGAGTGCGTCCCTGCCGACGAGTGCGGATGCAGCGAGAACGG
GTACGTGGATGTACACGGGTACAGCATCTCAGTCGTAGGCAGGACGATTC
AGGTTGACGGCATTAACCACACTCCCCCTGCTATTCTTGGCGATGGAGAG
GTGAAGATCTTCCTCTCTGGTCGTTTCATCGTGGTGCAAGCCGACTTCGG
GTTAGAGGCGTCCTTTGACGGGCAGCATTACGTAAAGGTGTTCGTTCCCG
GGTCCTTCGCCGGACTCACCCGGGGTCTCTGCGGCATCCTGAACGGAAAC
CCATGGGACGACTCCCTCACATCCGGAAACACGCTCGCCAGGGACTGGAA
TGCGTTTGGGAATAGCTGGTTGGTCAGCCAATCAAGCTGTCCCGAAAACA
TGATACTCCACCCGAGTCCGAGCTGTGACGCCATCCGTGACACCGTGGAG
GGCCCGACAGCCTGCGGGCTGCTGACCCTCCCGGACGGGCCGTTCAGATC
CTGCCACAACGTCATCGACCCGACGAAGTACTACGACGACTGCGTGTTCG
ACATGTGTCATTGGCAAGGCGTGAGGGGACTCTGTGAGACTTTGGAGACG
TACGCTGATATTTGTAAGGATGAAGGCGTCCCTCCAATTCTATGGAGAAC
CCCGGACCTTTGTCCTTTGGAATGTCCCCAGTACAGCCGGTACTCCCCCT
GCACCAGCGGCTGCCCTGCCACCTGCTCCGATCCCGAGGGCCCGAGGGGC
TGCGACCGCCCATGCGCAGAAGGCTGTGCGTGCCTGCCGGGATATATCAG
GAGCGGGGAGGAGTGCGTCCCTGCCGACGAGTGCGGATGCAGCGAGAACG
GGTACGTGGATGTACACGGGTACAGCATCTCAGTCGTAGGCAGGACGATT
CAGGTTGACGGCATTAACCACACTCCCCCTGCTATTCTTGGCGATGGAGA
GGTGAAGATCTTCCTCTCTGGTCGTTTCATCGTGGTGCAAGCCGACTTCG
GGTTAGAGGCGTCCTTTGACGGGCAGCATTACGTAAAGGTGTTCGTTCCC
GGGTCCTTCGCCGGACTCACCCGGGGTCTCTGCGGCATCCTGAACGGAAA
CCCATGGGACGACTCCCTCACATCCGGAAACACGCTCGCCAGGGACTGGA
ATGCGTTTGGGAATAGCTGGTTGGTCAGCCAATCAAGCTGTCCCGAAAAC
ATGATACTCCACCCGAGTCCGAGCTGTGACGCCATCCGTGACACCGTGGA
GGGCCCGACAGCCTGCGGGCTGCTGACCCTCCCGGACGGGCCGTTCAGAT
CCTGCCACAACGTCATCGACCCGACGAAGTACTACGACGACTGCGTGTTC
GACATGTGTCATTGGCAAGGCGTGAGGGGACTCTGTGAGACTTTGGAGAC
GTACGCTGATATTTGTAAGGATGAAGGCGTCCCTCCAATTCTATGGAGAA
CCCCGGACCTTTGTCCTTTGGAATGTCCCCAGTACAGCCGGTACTCCCCC
TGCACCAGCGGCTGCCCTGCCACCTGCTCCGATCCCGAGGGCCCGAGGGG
CTGCGACCGCCCATGCGCAGAAGGCTGTGCGTGCCTGCCGGGATATATCA
GGAGCGGGGAGGAGTGCGTCCCTGCCGACGAGTGCGGATGCAGCGAGAAC
GGGTACGTGGATGTACACGGGTACAGCATCTCAGTCGTAGGCAGGACGAT
TCAGGTTGACGGCATTAACCACACTCCCCCTGCTATTCTTGGCGATGGAG
AGGTGAAGATCTTCCTCTCTGGTCGTTTCATCGTGGTGCAAGCCGACTTC
GGGTTAGAGGCGTCCTTTGACGGGCAGCATTACGTAAAGGTGTTCGTTCC
CGGGTCCTTCGCCGGACTCACCCGGGGTCTCTGCGGCATCCTGAACGGAA
ACCCATGGGACGACTCCCTCACATCCGGAAACACGCTCGCCAGGGACTGG
AATGCGTTTGGGAATAGCTGGTTGGTCAGCCAATCAAGCTGTCCCGAAAA
CATGATACTCCACCCGAGTCCGAGCTGTGACGCCATCCGTGACACCGTGG
AGGGCCCGACAGCCTGCGGGCTGCTGACCCTCCCGGACGGGCCGTTCAGA
TCCTGCCACAACGTCATCGACCCGACGAAGTACTACGACGACTGCGTGTT
CGACATGTGTCATTGGCAAGGCGTGAGGGGACTCTGTGAGACTTTGGAGA
CGTACGCTGATATTTGTAAGGATGAAGGCGTCCCTCCAATTCTATGGAGA
ACCCCGGACCTTTGTCCTTTGGAATGTCCCCAGTACAGCCGGTACTCCCC
CTGCACCAGCGGCTGCCCTGCCACCTGCTCCGATCCCGAGGGCCCGAGGG
GCTGCGACCGCCCATGCGCAGAAGGCTGTGCGTGCCTGCCGGGATATATC
AGGAGCGGGGAGGAGTGCGTCCCTGCCGACGAGTGCGGATGCAGCGAGAA
CGGGTACGTGGATGTACACGGGTACAGCATCTCAGTCGTAGGCAGGACGA
TTCAGGTTGACGGCATTAACCACACTCCCCCTGCTATTCTTGGCGATGGA
GAGGTGAAGATCTTCCTCTCTGGTCGTTTCATCGTGGTGCAAGCCGACTT
CGGGTTAGAGGCGTCCTTTGACGGGCAGCATTACGTAAAGGTGTTCGTTC
CCGGGTCCTTCGCCGGACTCACCCGGGGTCTCTGCGGCATCCTGAACGGA
AACCCATGGGACGACTCCCTCACATCCGGAAACACGCTCGCCAGGGACTG
GAATGCGTTTGGGAATAGCTGGTTGGTCAGCCAATCAAGCTGTCCCGAAA
ACATGATACTCCACCCGAGTCCGAGCTGTGACGCCATCCGTGACACCGTG
GAGGGCCCGACAGCCTGCGGGCTGCTGACCCTCCCGGACGGGCCGTTCAG
ATCCTGCCACAACGTCATCGACCCGACGAAGTACTACGACGACTGCGTGT
TCGACATGTGTCATTGGCAAGGCGTGAGGGGACTCTGTGAGACTTTGGAG
ACGTACGCTGATATTTGTAAGGATGAAGGCGTCCCTCCAATTCTATGGAG
AACCCCGGACCTTTGTCCTTTGGAATGTCCCCAGTACAGCCGGTACTCCC
CCTGCACCAGCGGCTGCCCTGCCACCTGCTCCGATCCCGAGGGCCCGAGG
GGCTGCGACCGCCCATGCGCAGAAGGCTGTGCGTGCCTGCCGGGATATAT
CAGGAGCGGGGAGGAGTGCGTCCCTGCCGACGAGTGCGGATGCAGCGAGA
ACGGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000004 | genome | Sc0000004:3629938..3633175 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96983_cuf4 |
| Biotype | protein_coding |
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