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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96978_cuf2 >transcript:BL96978_cuf2-protein ID=transcript:BL96978_cuf2-protein|Name=transcript:BL96978_cuf2|organism=Branchiostoma lanceolatum|type=polypeptide|length=112bp
ARNDRLRDEGVEDSEEGMIEDKNEPTEGGKQDVSRTHEADSANLEGGSSV
GTSRGGSRRTTVTSPIIKLQSRTDGRTNRGGKKKIKNGRKPPARLRGRQR
TVAASSGVTTLW Run BLAST on NCBI mRNA from alignment at Sc0000004:5066750..5069262- Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96978_cuf2 ID=transcript:BL96978_cuf2|Name=transcript:BL96978_cuf2|organism=Branchiostoma lanceolatum|type=mRNA|length=2513bp|location=Sequence derived from alignment at Sc0000004:5066750..5069262- (Branchiostoma lanceolatum)
CCGCAAGGAACGACAGACTGCGGGATGAAGGCGTGGAGGACAGCGAGGAA
GGAATGATAGAAGACAAAAATGAACCAACTGAAGGAGGCAAACAAGACGT
CAGCAGGACCCACGAAGCCGACAGTGCGAACCTGGAGGGCGGTTCATCAG
TGGGTGCGGTATATTGAACCTTTGTGTCTGCCCGAATCCTAGCCGTGGCT
ACTCCGGAAGGGGGCTTAGGCTTGTATATCATATTACATATTAGGGCTTT
GTTTGTTGACTATCGACTATTATTATTATTATTGTTGGCAGCCGTCAGTC
TCGAAAGACTATGGCGTCGCATCCTGGCCAGTCTGTAGTGGGTTGTCCGC
TAGGGCTACTATATGTGTAACATACAAACAATTTGCTTGTATATCATATT
AGGGCTACTTTATGTAATACACAAACAAAAATGCCTTCTGGAGTCACCAC
AGCCACCCAAATCCCTGTGTAAAAAAAAGTCTATGCCCTTCGACGCGATC
ACAATCGTCGGAGGCCGTCGCACGCTTTTTTGATGGAATTTTCAATCAGG
CAGCGACAAAACCAACCGCCGACAGGATCTAAAAAAGCCTTTTTCAGTAA
CAAAACTGCTGAAGTCATTTGTAGCTCTGGGATAATGACAGCGCCGACGG
AATTCGACCGGTTTCGACTTTATTGTCTTTATCAAAAATGACAGAGATCG
GACCACTCCTCCTTTTATACTTTTTCTGTGCCTAACTAGTGCACGGCGCT
CTAACCGGGGTCTTTGATAATGTAGCATCGGCAGATATGCTGAAAATGGT
AATGTATTATCTGAAATAGAAGACAAAACGAATGAAGAAAGAAATGATGT
AAACATTTCATCGATGTATGACAAAATCAGTAGACTTCGATGCATCTGTG
TAGTAAAGGCTTGCCGTTTTGTTTTAAGTTTGTGTTCCTCACAGAGGCAA
ATGCATGCTGAAATACTTTTTCCTAGCGTGTTTGAACTACTCATCAATAA
TAACTATTGGTATTTGCATTTCTATCGTGTCCTGTTTGTTGAAACAATAG
GTACATCGAGGGGTGGCAGTCGAAGGACAACGGTGACGTCTCCCATCATC
AAATTGCAATCCAGAAGTACGATTTACATCTTGTCCTCCTTTGACGAATA
GTTGGCTCCCAAAGTCATTGGGGACCCCTAGCAAACAATGTCAAATTGCA
ATTTCATTTCATCTTCTGCATTCTAGTTCTAATCATTCTCCTACGCAGAG
CCTCGCCAGTGGCCTATACGGTATACCTTGGAGAGGCTCTGCTAAACCGG
GCTGAGGTTTCCACTTTTGTGGGCGTGGCCTCTAACCAGCTGTCAGCCAA
TCATAGAATCGCCAGAATGTTTTCTCCAGGTAAAGCCGATTGTCTGATTG
GCTGACAGCTGGTTAGATGATAAACCCACGATAGTGGAAACATCAGCGAA
GTTTCTCAGAGCCTTCCCAGTCTATGTGTATATTAGGTAGGCCGTGTGCG
AGGCTCTGCGTAGGAGAATGATTCCAGTGGACTTAAACCTTAGCCTACTG
TCATTTCATGAACTGACGATACATGTTTGAATACAGCTGACGGACGGACG
AATAGAGGAGGGAAGAAAAAGATCAAAAATGGTAAAAACAATTTGCACTT
TAGAACTGAAGTGTGTGTTTGTGTATGTCTGTGTTTGTGTGTGTCTGTGT
GTGCGTGTGTCTGTGCGCACGTGTGTGTGTGTATCTATATGTGTGTGTGT
GTATGTGAATGTGTGTGTACGCACGTGTGTGTATGTGTGTCTGTGCCTGT
CTGTGTGTCTACGTATATGTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGTGTGTGTCCATGTAAAAGTTTTCATTGGTATCAATTTGACTTATC
TTCTTCATTTTTAGGTCGAAAACCTCCCGCAAGGTTACGAGGCAGACAGA
GGACGGTTGCCGCTTCTTCAGGTTAGCACGTCCATGGTGTAAATAAACGG
GTACGGCAAAACCTAAAACGTAGAGTCTATAGTGACCCTGCAATGAACTT
GTCACAGTAAACAGATGGCCACTATAAACAGGATTATTAATCCTTGGGTC
AATGGCAAAATGACCTTGGGAACCACGCAAAAGTGACCATAATATAATGG
CCAGCTAGGTGCCCGTATACCTACATGTGGTGATGAACAATGCAGGTTTA
GTATAGTGCCGTGATATCGGATAAGGACGTTATAATATGATATGGCTACT
GAAAATTGCTTTATTCAAAACAGATGCCACATGTATGATATTAGAGAATA
CGCACAAATCCTTACATTACAGGTGTGACGACGTTGTGGGAGACGAAATC
CGGGATCAGCTCATTTCTTATAATACACGTAAAGTTGCTTTACCTCGTCC
ATATTACATTAGAGTTAACGTTAAATTTCGATTTGCTATTTTACAGGTGT
GACGACATTGTGG Coding sequence (CDS) from alignment at Sc0000004:5066750..5069262- >transcript:BL96978_cuf2 ID=transcript:BL96978_cuf2|Name=transcript:BL96978_cuf2|organism=Branchiostoma lanceolatum|type=CDS|length=1680bp|location=Sequence derived from alignment at Sc0000004:5066750..5069262- (Branchiostoma lanceolatum)
GCAAGGAACGACAGACTGCGGGATGAAGGCGTGGAGGACAGCGAGGAAGG
AATGATAGAAGACAAAAATGAACCAACTGAAGGAGGCAAACAAGACGTCA
GCAGGACCCACGAAGCCGACAGTGCGAACCTGGAGGGCGGTTCATCAGTG
GGTACATCGAGGGGTGGCAGTCGAAGGACAACGGTGACGTCTCCCATCAT
CAAATTGCAATCCAGAACTGACGGACGGACGAATAGAGGAGGGAAGAAAA
AGATCAAAAATGGTCGAAAACCTCCCGCAAGGTTACGAGGCAGACAGAGG
ACGGTTGCCGCTTCTTCAGGTGTGACGACATTGTGGGCAAGGAACGACAG
ACTGCGGGATGAAGGCGTGGAGGACAGCGAGGAAGGAATGATAGAAGACA
AAAATGAACCAACTGAAGGAGGCAAACAAGACGTCAGCAGGACCCACGAA
GCCGACAGTGCGAACCTGGAGGGCGGTTCATCAGTGGGTACATCGAGGGG
TGGCAGTCGAAGGACAACGGTGACGTCTCCCATCATCAAATTGCAATCCA
GAACTGACGGACGGACGAATAGAGGAGGGAAGAAAAAGATCAAAAATGGT
CGAAAACCTCCCGCAAGGTTACGAGGCAGACAGAGGACGGTTGCCGCTTC
TTCAGGTGTGACGACATTGTGGGCAAGGAACGACAGACTGCGGGATGAAG
GCGTGGAGGACAGCGAGGAAGGAATGATAGAAGACAAAAATGAACCAACT
GAAGGAGGCAAACAAGACGTCAGCAGGACCCACGAAGCCGACAGTGCGAA
CCTGGAGGGCGGTTCATCAGTGGGTACATCGAGGGGTGGCAGTCGAAGGA
CAACGGTGACGTCTCCCATCATCAAATTGCAATCCAGAACTGACGGACGG
ACGAATAGAGGAGGGAAGAAAAAGATCAAAAATGGTCGAAAACCTCCCGC
AAGGTTACGAGGCAGACAGAGGACGGTTGCCGCTTCTTCAGGTGTGACGA
CATTGTGGGCAAGGAACGACAGACTGCGGGATGAAGGCGTGGAGGACAGC
GAGGAAGGAATGATAGAAGACAAAAATGAACCAACTGAAGGAGGCAAACA
AGACGTCAGCAGGACCCACGAAGCCGACAGTGCGAACCTGGAGGGCGGTT
CATCAGTGGGTACATCGAGGGGTGGCAGTCGAAGGACAACGGTGACGTCT
CCCATCATCAAATTGCAATCCAGAACTGACGGACGGACGAATAGAGGAGG
GAAGAAAAAGATCAAAAATGGTCGAAAACCTCCCGCAAGGTTACGAGGCA
GACAGAGGACGGTTGCCGCTTCTTCAGGTGTGACGACATTGTGGGCAAGG
AACGACAGACTGCGGGATGAAGGCGTGGAGGACAGCGAGGAAGGAATGAT
AGAAGACAAAAATGAACCAACTGAAGGAGGCAAACAAGACGTCAGCAGGA
CCCACGAAGCCGACAGTGCGAACCTGGAGGGCGGTTCATCAGTGGGTACA
TCGAGGGGTGGCAGTCGAAGGACAACGGTGACGTCTCCCATCATCAAATT
GCAATCCAGAACTGACGGACGGACGAATAGAGGAGGGAAGAAAAAGATCA
AAAATGGTCGAAAACCTCCCGCAAGGTTACGAGGCAGACAGAGGACGGTT
GCCGCTTCTTCAGGTGTGACGACATTGTGG
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000004 | genome | Sc0000004:5066750..5069262 - |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96978_cuf2 |
| Biotype | protein_coding |
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