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Sequence
The following sequences are available for this feature:
protein sequence of transcript:BL96969_cuf1 >transcript:BL96969_cuf1-protein ID=transcript:BL96969_cuf1-protein|Name=transcript:BL96969_cuf1|organism=Branchiostoma lanceolatum|type=polypeptide|length=282bp
DSESHTCQKCRRQFRQAHHFKKHVKTCTSAKTKTRRTYGSFTCKTCEKVF
SRSDWLRRHQEVHSKERPFRCKLCSASYKRRDALQRHELIQHTWPDEQVK
KAAASEARCVKCGKVYMAGEIPRHMAMSHSYNPDSENISDSENMSHSTPS
EQPHADAELSHSAQLGQQTTDPDSENISHFTRSEQLQSGLDVAKFSNFAP
SGQSQADLGPTFENKLSTTNSDMVEGEAHKIYPALGIGQRITESEQKQVL
VNTDSGNNHCELIDETKGKQLAPAQQDTDSQS Run BLAST on NCBI mRNA from alignment at Sc0000044:519602..522224+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >transcript:BL96969_cuf1 ID=transcript:BL96969_cuf1|Name=transcript:BL96969_cuf1|organism=Branchiostoma lanceolatum|type=mRNA|length=2623bp|location=Sequence derived from alignment at Sc0000044:519602..522224+ (Branchiostoma lanceolatum)
GACTCCGAGTCCCACACCTGCCAGAAGTGCAGAAGACAGTTCAGACAGGC
CCACCACTTTAAGAAGCACGTCAAGACGTGCACCTCTGCCAAGACGAAGA
CGCGGCGCACCTACGGCTCCTTCACCTGTAAGACGTGTGAGAAAGTCTTC
AGCCGCTCTGATTGGCTAAGACGTCACCAGGAGGTTCATAGCAAGGAGCG
CCCGTTTAGGTTGGTCAAATTAAACACAACCTGTAGAATAGGCGTCATGA
TCATGATGGTTGATGTTACATAAACGTAAGACTGTTATTGTTAGGGAAGT
TATAATCGGTGATGATTGTATTACTAGTATCACCGGTACCTGGGACCCAC
CCTCCCCCCCACCCAAAGGACAATAACTGTTCCTATGGTGTTGTCTTACC
ATAGGAACCTTCCCATCTTGTTTTACATTTCAATTCCTCTTATGCATGAC
TGTGTGATTTGCCATGTAAAACCGTTTTTTCTAGTTATTGTAAATAAGTA
CTGGTTAGTTCTGCTAGTTCATATTAGTGACGCTGAAGATCTAGAAGAGT
GATGGATGTCACTCGAAACTTCCGGAAATAAATCTCCGAATTCTTATCCA
GTTGTAGAATCTGAATTCTCTTTATTAACATACGTACTACAAAAAACACA
ATGTAGTATTAGCGTTTGTATTGTTGAAGCAGAGTGTTTCCGTGTGTCGT
TTACAAAACTATGGCAACTTCATTGCAAATATAATGATAATCAACAGTAA
ATTATCTCGTATTTCATCCCTCTATAATACATGTACAGCTGTCAGGAGGC
ATGTAAGCCTTGTTGTTGTTGATATGAACCAATAAACTAGTCTACTACTG
ACTACAGATGTAAGCTGTGTTCGGCGTCGTACAAGCGCCGAGACGCGCTA
CAGCGGCACGAGCTGATCCAACACACCTGGCCCGACGAACAGGTAACTCC
ACACCTTTGTTTCTTTGTTTATCACAGGTGTTTTTTTTTTAGTCAGAATT
GCCCTGATGAAAGTGACAGGCGGTCATCGAAATGTCACAGTGCATAAAGC
AGCTGGTTGTGTACGAAATTTGTTGTTGTTGTTATTCATCACACAGGTCT
GCCTGCTCATCTTTGTCTGGTGTTGTGTTGGCCGGGTAACGGTTAGGGTG
TTTGGTCTGGAGCCCAAAGGTCCTGGGTTCAAATCCCTGAAGCCTATAAA
TAGGCCGCCGATGTTGTGTTCTCCGGAAAGGCTCTTATTTGAATTATTAT
TTATGATTGTGTTAATACATAAAGTTTATGTGAAGTTTATTTTGTCGTAA
CAATTTACCCGTGACTCCTGCCCCTCCACTTCAACCTTGTTGAAAAGTGG
CCCGTGTGGCTGAACAAGCATTCGAAAGGATATAAAGGCTTTGACTTGAC
TTGACTTGACACGACTTTACTCACAACACGGTACCTGACGTTGGTTGGGG
TCAGGTAAAGGCTTCGCCTTCCAACTGCAATCATCATCATCAGATATTGG
AGCTTTCTTTTAACACAACCAGTAACTTTCACCTGCTGACGTTTCAGTGT
CTATCAGACACCTTCCTCAGAGCTTCTGACTTAAGTGCTTCTTCTCACCG
CTATAAGTAGCTGATGTAGGGCGAGTTTGTTTGGCAAGAATGCAATCCCG
AACGTGGCTAATCATCATCATCAGTCCACTGGCTGCCAATTGCAATACTG
TGCCCTATGTATATCATGTATGAATAGACACAGTGAATAACAACCCACCT
ACTGCCTCAATAAGGCCATCAATCAATAAATCAATCAATCAAAATTGTTT
ATTTATTATAAAAAGGCATTGCAGCCAAAGGCTGAATTGTGCCCTCTGTA
CATATTGCACTTTGTTTTCACCATCAAGACATTACACAAATCATTTAAAA
TTATTTACAGTGGTATTAGAACAGTTTCAATGCATTGGCATTAAGTTCGT
CTATCTGATATCCATTTGCTTATCATATAGACAGTTCAATCCGTTTCATT
TTGTAGCATTCAGGAGCGGTAACAAAGATAGGCCATGGGACTGCCTTTAC
CTTAACCATCTTGTGTTGCAGGTGAAGAAAGCAGCAGCTAGCGAGGCCAG
GTGTGTGAAGTGCGGGAAGGTGTACATGGCAGGGGAGATCCCACGTCACA
TGGCCATGTCGCACTCTTACAACCCGGACTCGGAAAACATTTCGGACTCT
GAAAATATGTCGCACTCCACACCATCAGAGCAGCCACACGCTGACGCAGA
ATTGTCACACTCTGCACAATTGGGACAACAAACAACTGACCCGGACTCTG
AAAATATTTCTCACTTCACACGATCAGAACAACTACAGAGCGGCCTAGAC
GTTGCAAAATTTTCAAACTTTGCACCATCAGGACAGTCACAAGCAGATCT
AGGGCCTACCTTTGAAAACAAGCTCAGCACGACAAACTCAGATATGGTGG
AGGGTGAAGCGCACAAGATATATCCAGCTTTAGGGATTGGACAACGCATC
ACGGAGTCGGAACAAAAACAGGTACTAGTAAATACCGACTCAGGAAACAA
TCATTGTGAGCTGATAGATGAAACAAAAGGCAAGCAACTAGCCCCTGCGC
AGCAAGACACAGACTCACAAAGC Coding sequence (CDS) from alignment at Sc0000044:519602..522224+ >transcript:BL96969_cuf1 ID=transcript:BL96969_cuf1|Name=transcript:BL96969_cuf1|organism=Branchiostoma lanceolatum|type=CDS|length=2538bp|location=Sequence derived from alignment at Sc0000044:519602..522224+ (Branchiostoma lanceolatum)
GACTCCGAGTCCCACACCTGCCAGAAGTGCAGAAGACAGTTCAGACAGGC
CCACCACTTTAAGAAGCACGTCAAGACGTGCACCTCTGCCAAGACGAAGA
CGCGGCGCACCTACGGCTCCTTCACCTGTAAGACGTGTGAGAAAGTCTTC
AGCCGCTCTGATTGGCTAAGACGTCACCAGGAGGTTCATAGCAAGGAGCG
CCCGTTTAGATGTAAGCTGTGTTCGGCGTCGTACAAGCGCCGAGACGCGC
TACAGCGGCACGAGCTGATCCAACACACCTGGCCCGACGAACAGGTGAAG
AAAGCAGCAGCTAGCGAGGCCAGGTGTGTGAAGTGCGGGAAGGTGTACAT
GGCAGGGGAGATCCCACGTCACATGGCCATGTCGCACTCTTACAACCCGG
ACTCGGAAAACATTTCGGACTCTGAAAATATGTCGCACTCCACACCATCA
GAGCAGCCACACGCTGACGCAGAATTGTCACACTCTGCACAATTGGGACA
ACAAACAACTGACCCGGACTCTGAAAATATTTCTCACTTCACACGATCAG
AACAACTACAGAGCGGCCTAGACGTTGCAAAATTTTCAAACTTTGCACCA
TCAGGACAGTCACAAGCAGATCTAGGGCCTACCTTTGAAAACAAGCTCAG
CACGACAAACTCAGATATGGTGGAGGGTGAAGCGCACAAGATATATCCAG
CTTTAGGGATTGGACAACGCATCACGGAGTCGGAACAAAAACAGGTACTA
GTAAATACCGACTCAGGAAACAATCATTGTGAGCTGATAGATGAAACAAA
AGGCAAGCAACTAGCCCCTGCGCAGCAAGACACAGACTCACAAAGCGACT
CCGAGTCCCACACCTGCCAGAAGTGCAGAAGACAGTTCAGACAGGCCCAC
CACTTTAAGAAGCACGTCAAGACGTGCACCTCTGCCAAGACGAAGACGCG
GCGCACCTACGGCTCCTTCACCTGTAAGACGTGTGAGAAAGTCTTCAGCC
GCTCTGATTGGCTAAGACGTCACCAGGAGGTTCATAGCAAGGAGCGCCCG
TTTAGATGTAAGCTGTGTTCGGCGTCGTACAAGCGCCGAGACGCGCTACA
GCGGCACGAGCTGATCCAACACACCTGGCCCGACGAACAGGTGAAGAAAG
CAGCAGCTAGCGAGGCCAGGTGTGTGAAGTGCGGGAAGGTGTACATGGCA
GGGGAGATCCCACGTCACATGGCCATGTCGCACTCTTACAACCCGGACTC
GGAAAACATTTCGGACTCTGAAAATATGTCGCACTCCACACCATCAGAGC
AGCCACACGCTGACGCAGAATTGTCACACTCTGCACAATTGGGACAACAA
ACAACTGACCCGGACTCTGAAAATATTTCTCACTTCACACGATCAGAACA
ACTACAGAGCGGCCTAGACGTTGCAAAATTTTCAAACTTTGCACCATCAG
GACAGTCACAAGCAGATCTAGGGCCTACCTTTGAAAACAAGCTCAGCACG
ACAAACTCAGATATGGTGGAGGGTGAAGCGCACAAGATATATCCAGCTTT
AGGGATTGGACAACGCATCACGGAGTCGGAACAAAAACAGGTACTAGTAA
ATACCGACTCAGGAAACAATCATTGTGAGCTGATAGATGAAACAAAAGGC
AAGCAACTAGCCCCTGCGCAGCAAGACACAGACTCACAAAGCGACTCCGA
GTCCCACACCTGCCAGAAGTGCAGAAGACAGTTCAGACAGGCCCACCACT
TTAAGAAGCACGTCAAGACGTGCACCTCTGCCAAGACGAAGACGCGGCGC
ACCTACGGCTCCTTCACCTGTAAGACGTGTGAGAAAGTCTTCAGCCGCTC
TGATTGGCTAAGACGTCACCAGGAGGTTCATAGCAAGGAGCGCCCGTTTA
GATGTAAGCTGTGTTCGGCGTCGTACAAGCGCCGAGACGCGCTACAGCGG
CACGAGCTGATCCAACACACCTGGCCCGACGAACAGGTGAAGAAAGCAGC
AGCTAGCGAGGCCAGGTGTGTGAAGTGCGGGAAGGTGTACATGGCAGGGG
AGATCCCACGTCACATGGCCATGTCGCACTCTTACAACCCGGACTCGGAA
AACATTTCGGACTCTGAAAATATGTCGCACTCCACACCATCAGAGCAGCC
ACACGCTGACGCAGAATTGTCACACTCTGCACAATTGGGACAACAAACAA
CTGACCCGGACTCTGAAAATATTTCTCACTTCACACGATCAGAACAACTA
CAGAGCGGCCTAGACGTTGCAAAATTTTCAAACTTTGCACCATCAGGACA
GTCACAAGCAGATCTAGGGCCTACCTTTGAAAACAAGCTCAGCACGACAA
ACTCAGATATGGTGGAGGGTGAAGCGCACAAGATATATCCAGCTTTAGGG
ATTGGACAACGCATCACGGAGTCGGAACAAAAACAGGTACTAGTAAATAC
CGACTCAGGAAACAATCATTGTGAGCTGATAGATGAAACAAAAGGCAAGC
AACTAGCCCCTGCGCAGCAAGACACAGACTCACAAAGC
Gene-mRNA-Prot
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| Sc0000044 | genome | Sc0000044:519602..522224 + |
Properties
| Property Name | Value |
|---|
| Transcript id | BL96969_cuf1 |
| Biotype | protein_coding |
|
